RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 UTRNP46939 3433 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 LMTK2Q8IWU2 1503 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 C19orf44Q9H6X5 657 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 ATRNO75882 1429 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 NCOA3Q9Y6Q9 1424 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 MYO5BQ9ULV0 1848 aa6.73□□□□□ -1.33
CTC1-209ENST00000581729 LRP5O75197 1615 aa6.72□□□□□ -1.33
CTC1-209ENST00000581729 GALR2O43603 387 aaPredicted RBP6.72□□□□□ -1.33
CTC1-209ENST00000581729 ATF3P18847 181 aa6.72□□□□□ -1.33
CTC1-209ENST00000581729 MMRN1Q13201 1228 aa6.72□□□□□ -1.33
CTC1-209ENST00000581729 ZNF692Q9BU19 519 aaPredicted RBP6.72□□□□□ -1.33
CTC1-209ENST00000581729 RRP7BPQ9NSQ0 103 aa6.72□□□□□ -1.33
CTC1-209ENST00000581729 ATF5Q9Y2D1 282 aaPredicted RBP6.72□□□□□ -1.33
CTC1-209ENST00000581729 ERBINQ96RT1 1412 aa6.72□□□□□ -1.33
CTC1-209ENST00000581729 ABCC5O15440 1437 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 PSDA5PKW4 1024 aaPredicted RBP6.71□□□□□ -1.34
CTC1-209ENST00000581729 NGLY1Q96IV0 654 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 USP21Q9UK80 565 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 TBX22Q9Y458 520 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 BCL9LQ86UU0 1499 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 GCC2Q8IWJ2 1684 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 TRPM2O94759 1503 aa6.71□□□□□ -1.34
CTC1-209ENST00000581729 TMEM131LA2VDJ0 1609 aa6.7□□□□□ -1.34
CTC1-209ENST00000581729 KANK4Q5T7N3 995 aaPredicted RBP6.7□□□□□ -1.34
CTC1-209ENST00000581729 AMOTL2Q9Y2J4 779 aa6.7□□□□□ -1.34
CTC1-209ENST00000581729 DCCP43146 1447 aa6.69□□□□□ -1.34
CTC1-209ENST00000581729 PPP1R15AO75807 674 aaPredicted RBP6.69□□□□□ -1.34
CTC1-209ENST00000581729 FNBP4Q8N3X1 1017 aaPredicted RBP6.69□□□□□ -1.34
CTC1-209ENST00000581729 LRRC59Q96AG4 307 aaKnown RBP6.69□□□□□ -1.34
CTC1-209ENST00000581729 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
CTC1-209ENST00000581729 XRN1Q8IZH2 1706 aaKnown RBP6.69□□□□□ -1.34
CTC1-209ENST00000581729 GLI3P10071 1580 aa6.69□□□□□ -1.34
CTC1-209ENST00000581729 NRXN3Q9Y4C0 1643 aa6.68□□□□□ -1.34
CTC1-209ENST00000581729 CROCC2H7BZ55 1655 aa6.68□□□□□ -1.34
CTC1-209ENST00000581729 METRNQ9UJH8 293 aa6.68□□□□□ -1.34
CTC1-209ENST00000581729 BLMP54132 1417 aaPredicted RBP6.67□□□□□ -1.34
CTC1-209ENST00000581729 MYOM3Q5VTT5 1437 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 NALCNQ8IZF0 1738 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 MYOM2P54296 1465 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 UNC13BO14795 1591 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 HRCP23327 699 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 SLC52A1Q9NWF4 448 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 METP08581 1390 aa6.67□□□□□ -1.34
CTC1-209ENST00000581729 C1orf167Q5SNV9 1468 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 CEP350Q5VT06 3117 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 ORAI2Q96SN7 254 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 CHIC2Q9UKJ5 165 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 SOS2Q07890 1332 aaPredicted RBP6.66□□□□□ -1.34
CTC1-209ENST00000581729 KANK1Q14678 1352 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 PIK3R4Q99570 1358 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 DAPK1P53355 1430 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 ADGRL3Q9HAR2 1447 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 RALGAPBQ86X10 1494 aa6.66□□□□□ -1.34
CTC1-209ENST00000581729 LAMC1P11047 1609 aa6.65□□□□□ -1.34
CTC1-209ENST00000581729 C7P10643 843 aa6.65□□□□□ -1.34
CTC1-209ENST00000581729 CHGAP10645 457 aaKnown RBP6.65□□□□□ -1.34
CTC1-209ENST00000581729 CCDC125Q86Z20 511 aa6.65□□□□□ -1.34
CTC1-209ENST00000581729 SLC39A7Q92504 469 aa6.65□□□□□ -1.34
CTC1-209ENST00000581729 GJD4Q96KN9 370 aaPredicted RBP6.65□□□□□ -1.34
CTC1-209ENST00000581729 PTCH1Q13635 1447 aa6.65□□□□□ -1.35
CTC1-209ENST00000581729 COL22A1Q8NFW1 1626 aaPredicted RBP6.65□□□□□ -1.35
CTC1-209ENST00000581729 BRWD3Q6RI45 1802 aa6.64□□□□□ -1.35
CTC1-209ENST00000581729 SPNS2Q8IVW8 549 aa6.64□□□□□ -1.35
CTC1-209ENST00000581729 XPCQ01831 940 aaPredicted RBP6.63□□□□□ -1.35
CTC1-209ENST00000581729 RPRD2Q5VT52 1461 aaKnown RBP6.63□□□□□ -1.35
CTC1-209ENST00000581729 PTPN23Q9H3S7 1636 aa6.62□□□□□ -1.35
CTC1-209ENST00000581729 SLIT2O94813 1529 aa6.62□□□□□ -1.35
CTC1-209ENST00000581729 PXDNQ92626 1479 aa6.62□□□□□ -1.35
CTC1-209ENST00000581729 PAK3O75914 559 aaPredicted RBP6.62□□□□□ -1.35
CTC1-209ENST00000581729 YY1P25490 414 aa6.62□□□□□ -1.35
CTC1-209ENST00000581729 ROBO2Q9HCK4 1378 aa6.61□□□□□ -1.35
CTC1-209ENST00000581729 R3HDM1Q15032 1099 aaKnown RBP6.61□□□□□ -1.35
CTC1-209ENST00000581729 SEPT12Q8IYM1 358 aa6.61□□□□□ -1.35
CTC1-209ENST00000581729 PELP1Q8IZL8 1130 aaKnown RBP6.61□□□□□ -1.35
CTC1-209ENST00000581729 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.61□□□□□ -1.35
CTC1-209ENST00000581729 SSUH2Q9Y2M2 353 aa6.61□□□□□ -1.35
CTC1-209ENST00000581729 E9PCH4 1651 aa6.61□□□□□ -1.35
CTC1-209ENST00000581729 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.6□□□□□ -1.35
CTC1-209ENST00000581729 POTEJP0CG39 1038 aa6.6□□□□□ -1.35
CTC1-209ENST00000581729 EN1Q05925 392 aaPredicted RBP6.6□□□□□ -1.35
CTC1-209ENST00000581729 FAM182BQ5T319 152 aa6.6□□□□□ -1.35
CTC1-209ENST00000581729 SPHKAPQ2M3C7 1700 aa6.59□□□□□ -1.35
CTC1-209ENST00000581729 MARF1Q9Y4F3 1742 aaKnown RBP6.59□□□□□ -1.35
CTC1-209ENST00000581729 ANKRD30AQ9BXX3 1397 aa6.59□□□□□ -1.35
CTC1-209ENST00000581729 UNC5CLQ8IV45 518 aa6.59□□□□□ -1.35
CTC1-209ENST00000581729 ADGRL2O95490 1459 aa6.59□□□□□ -1.36
CTC1-209ENST00000581729 ANKRD50Q9ULJ7 1429 aa6.59□□□□□ -1.36
CTC1-209ENST00000581729 HDGFP51858 240 aaKnown RBP6.58□□□□□ -1.36
CTC1-209ENST00000581729 VPS8Q8N3P4 1428 aa6.58□□□□□ -1.36
CTC1-209ENST00000581729 GOLGB1Q14789 3259 aaKnown RBP6.57□□□□□ -1.36
CTC1-209ENST00000581729 SF3B2Q13435 895 aaKnown RBP6.57□□□□□ -1.36
CTC1-209ENST00000581729 EZH2Q15910 746 aaKnown RBP6.57□□□□□ -1.36
CTC1-209ENST00000581729 IFFO2Q5TF58 517 aa6.57□□□□□ -1.36
CTC1-209ENST00000581729 KRT27Q7Z3Y8 459 aa6.57□□□□□ -1.36
CTC1-209ENST00000581729 CAMTA1Q9Y6Y1 1673 aa6.57□□□□□ -1.36
CTC1-209ENST00000581729 USP32Q8NFA0 1604 aa6.57□□□□□ -1.36
CTC1-209ENST00000581729 NEXMIFQ5QGS0 1516 aa6.56□□□□□ -1.36
CTC1-209ENST00000581729 FOXO3O43524 673 aa6.56□□□□□ -1.36
CTC1-209ENST00000581729 ONECUT3O60422 494 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms