RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 RBM27Q9P2N5 1060 aaKnown RBP7.79□□□□□ -1.16
AC009117.3-202ENST00000563825 PTPRKQ15262 1439 aa7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 EHBP1L1Q8N3D4 1523 aa7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 SMYD5Q6GMV2 418 aa7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 ANKK1Q8NFD2 765 aa7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 EYA1Q99502 592 aa7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 TDRD9Q8NDG6 1382 aaKnown RBP7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 TCOF1Q13428 1488 aaKnown RBP7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 URB2Q14146 1524 aaKnown RBP7.78□□□□□ -1.16
AC009117.3-202ENST00000563825 SAMD9Q5K651 1589 aa7.77□□□□□ -1.17
AC009117.3-202ENST00000563825 EIF4G2P78344 907 aaKnown RBP eCLIP7.77□□□□□ -1.17
AC009117.3-202ENST00000563825 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
AC009117.3-202ENST00000563825 ARHGEF11O15085 1522 aa7.77□□□□□ -1.17
AC009117.3-202ENST00000563825 ROCK1Q13464 1354 aa7.76□□□□□ -1.17
AC009117.3-202ENST00000563825 FECHP22830 423 aa7.76□□□□□ -1.17
AC009117.3-202ENST00000563825 PTPN23Q9H3S7 1636 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 UGGT2Q9NYU1 1516 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 NBPF26B4DH59 902 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 RGS20O76081 388 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 FCHSD2O94868 740 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 SAMD7Q7Z3H4 446 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 WBP1LQ9NX94 342 aa7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 CDK11AQ9UQ88 783 aaPredicted RBP7.75□□□□□ -1.17
AC009117.3-202ENST00000563825 GPR37O15354 613 aa7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 HSPA5P11021 654 aaKnown RBP7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 TRIM52Q96A61 297 aa7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 MPHOSPH9Q99550 1183 aa7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 ANP32EQ9BTT0 268 aa7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 NESP48681 1621 aa7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 ABCA5Q8WWZ7 1642 aa7.74□□□□□ -1.17
AC009117.3-202ENST00000563825 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
AC009117.3-202ENST00000563825 IRX2Q9BZI1 471 aaPredicted RBP7.73□□□□□ -1.17
AC009117.3-202ENST00000563825 ADGRG1Q9Y653 693 aa7.73□□□□□ -1.17
AC009117.3-202ENST00000563825 CTTNBP2Q8WZ74 1663 aa7.73□□□□□ -1.17
AC009117.3-202ENST00000563825 SUPT6HQ7KZ85 1726 aaKnown RBP7.72□□□□□ -1.17
AC009117.3-202ENST00000563825 LMOD2Q6P5Q4 547 aa7.72□□□□□ -1.17
AC009117.3-202ENST00000563825 RRP7BPQ9NSQ0 103 aa7.72□□□□□ -1.17
AC009117.3-202ENST00000563825 TSR3Q9UJK0 312 aaKnown RBP7.72□□□□□ -1.17
AC009117.3-202ENST00000563825 HIC1Q14526 733 aa7.71□□□□□ -1.18
AC009117.3-202ENST00000563825 HIRIP3Q9BW71 556 aaPredicted RBP7.71□□□□□ -1.18
AC009117.3-202ENST00000563825 HPS5Q9UPZ3 1129 aa7.71□□□□□ -1.18
AC009117.3-202ENST00000563825 EPRSP07814 1512 aaKnown RBP7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 L3MBTL2Q969R5 705 aa7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 ARID4BQ4LE39 1312 aaPredicted RBP7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 WASHC2AQ641Q2 1341 aa7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 ANKRD30BQ9BXX2 1392 aa7.7□□□□□ -1.18
AC009117.3-202ENST00000563825 KDM5BQ9UGL1 1544 aa7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 GNPATO15228 680 aa7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 PPP4CP60510 307 aa7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 HNRNPUQ00839 825 aaKnown RBP eCLIP7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 TPRNQ4KMQ1 711 aa7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 IFFO2Q5TF58 517 aa7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 HECW1Q76N89 1606 aa7.69□□□□□ -1.18
AC009117.3-202ENST00000563825 KIF21AQ7Z4S6 1674 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 RCCD1A6NED2 376 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 HDGFP51858 240 aaKnown RBP7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 RBM46Q8TBY0 533 aaKnown RBP7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 PPP4R2Q9NY27 417 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 CCDC7Q96M83 1385 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 NCOA1Q15788 1441 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 CNTLNQ9NXG0 1405 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 KIAA0586Q9BVV6 1533 aa7.68□□□□□ -1.18
AC009117.3-202ENST00000563825 PXYLP1Q8TE99 480 aa7.67□□□□□ -1.18
AC009117.3-202ENST00000563825 PRKRIP1Q9H875 184 aaPredicted RBP7.67□□□□□ -1.18
AC009117.3-202ENST00000563825 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
AC009117.3-202ENST00000563825 FANCIQ9NVI1 1328 aa7.66□□□□□ -1.18
AC009117.3-202ENST00000563825 RPRD2Q5VT52 1461 aaKnown RBP7.66□□□□□ -1.18
AC009117.3-202ENST00000563825 IQGAP2Q13576 1575 aa7.66□□□□□ -1.18
AC009117.3-202ENST00000563825 TARBP1Q13395 1621 aaKnown RBP7.66□□□□□ -1.18
AC009117.3-202ENST00000563825 ABCC5O15440 1437 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 OATP04181 439 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 PRKCSHP14314 528 aaPredicted RBP7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 DAPK1P53355 1430 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 MAGI3Q5TCQ9 1506 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 NYAP1Q6ZVC0 841 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 IFT140Q96RY7 1462 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 PHOX2BQ99453 314 aa7.65□□□□□ -1.18
AC009117.3-202ENST00000563825 WDR62O43379 1518 aa7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 DENND4BO75064 1496 aaPredicted RBP7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 MRC2Q9UBG0 1479 aa7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 SPATA31E1Q6ZUB1 1445 aa7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 DNAJB2P25686 324 aa7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 APLP1P51693 650 aa7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 METTL3Q86U44 580 aaKnown RBP7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 TMEM134Q9H6X4 195 aa7.64□□□□□ -1.19
AC009117.3-202ENST00000563825 ROCK2O75116 1388 aaKnown RBP7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 A0A0G2JS52 829 aa7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 RNF40O75150 1001 aa7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 ITGBL1O95965 494 aaPredicted RBP7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 NBPF8Q3BBV2 869 aa7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 MRS2Q9HD23 443 aa7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 CFDP1Q9UEE9 299 aaPredicted RBP7.63□□□□□ -1.19
AC009117.3-202ENST00000563825 TROQ12816 1431 aaPredicted RBP7.62□□□□□ -1.19
AC009117.3-202ENST00000563825 TJAP1Q5JTD0 557 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms