RNA–Protein interactions for RNA: ENST00000558917.1

AC090888.3-201, humanhuman

BASIC

Gene AC090888.3, Length 509 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090888.3-201ENST00000558917 SCAPERQ9BY12 1400 aa11.38□□□□□ -0.59
AC090888.3-201ENST00000558917 DPYSL4O14531 572 aa11.37□□□□□ -0.59
AC090888.3-201ENST00000558917 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
AC090888.3-201ENST00000558917 CTTNBP2Q8WZ74 1663 aa11.36□□□□□ -0.59
AC090888.3-201ENST00000558917 ANKK1Q8NFD2 765 aa11.36□□□□□ -0.59
AC090888.3-201ENST00000558917 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
AC090888.3-201ENST00000558917 IFFO2Q5TF58 517 aa11.35□□□□□ -0.59
AC090888.3-201ENST00000558917 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
AC090888.3-201ENST00000558917 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
AC090888.3-201ENST00000558917 PLA2R1Q13018 1463 aa11.34□□□□□ -0.59
AC090888.3-201ENST00000558917 EPAS1Q99814 870 aa11.34□□□□□ -0.59
AC090888.3-201ENST00000558917 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
AC090888.3-201ENST00000558917 C6orf132Q5T0Z8 1188 aa11.33□□□□□ -0.6
AC090888.3-201ENST00000558917 DIP2CQ9Y2E4 1556 aa11.33□□□□□ -0.6
AC090888.3-201ENST00000558917 BCAMP50895 628 aa11.32□□□□□ -0.6
AC090888.3-201ENST00000558917 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
AC090888.3-201ENST00000558917 RAPGEF6Q8TEU7 1601 aa11.31□□□□□ -0.6
AC090888.3-201ENST00000558917 CPS1P31327 1500 aa11.31□□□□□ -0.6
AC090888.3-201ENST00000558917 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
AC090888.3-201ENST00000558917 NPATQ14207 1427 aa11.3□□□□□ -0.6
AC090888.3-201ENST00000558917 A0A0G2JS52 829 aa11.3□□□□□ -0.6
AC090888.3-201ENST00000558917 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
AC090888.3-201ENST00000558917 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
AC090888.3-201ENST00000558917 DDX12PQ92771 950 aa11.3□□□□□ -0.6
AC090888.3-201ENST00000558917 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
AC090888.3-201ENST00000558917 REREQ9P2R6 1566 aa11.29□□□□□ -0.6
AC090888.3-201ENST00000558917 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
AC090888.3-201ENST00000558917 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
AC090888.3-201ENST00000558917 SEPT9Q9UHD8 586 aaPredicted RBP11.29□□□□□ -0.6
AC090888.3-201ENST00000558917 AGLP35573 1532 aa11.29□□□□□ -0.6
AC090888.3-201ENST00000558917 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 ABCA6Q8N139 1617 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 PTPRKQ15262 1439 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 RGS20O76081 388 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 AFAP1Q8N556 730 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 KDM5CP41229 1560 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 VWDEQ8N2E2 1590 aa11.28□□□□□ -0.6
AC090888.3-201ENST00000558917 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.6
AC090888.3-201ENST00000558917 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
AC090888.3-201ENST00000558917 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.61
AC090888.3-201ENST00000558917 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
AC090888.3-201ENST00000558917 PLCH2O75038 1416 aa11.26□□□□□ -0.61
AC090888.3-201ENST00000558917 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
AC090888.3-201ENST00000558917 ZMYM3Q14202 1370 aa11.25□□□□□ -0.61
AC090888.3-201ENST00000558917 CNTLNQ9NXG0 1405 aa11.24□□□□□ -0.61
AC090888.3-201ENST00000558917 SUPT6HQ7KZ85 1726 aaKnown RBP11.23□□□□□ -0.61
AC090888.3-201ENST00000558917 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
AC090888.3-201ENST00000558917 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
AC090888.3-201ENST00000558917 NBR1Q14596 966 aa11.23□□□□□ -0.61
AC090888.3-201ENST00000558917 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
AC090888.3-201ENST00000558917 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
AC090888.3-201ENST00000558917 MROH2AA6NES4 1674 aa11.22□□□□□ -0.61
AC090888.3-201ENST00000558917 SAMD9Q5K651 1589 aa11.22□□□□□ -0.61
AC090888.3-201ENST00000558917 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
AC090888.3-201ENST00000558917 ZNF518AQ6AHZ1 1483 aa11.21□□□□□ -0.61
AC090888.3-201ENST00000558917 MAP3K7O43318 606 aa11.21□□□□□ -0.61
AC090888.3-201ENST00000558917 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
AC090888.3-201ENST00000558917 FAM98CQ17RN3 349 aaKnown RBP11.21□□□□□ -0.61
AC090888.3-201ENST00000558917 NYAP1Q6ZVC0 841 aa11.21□□□□□ -0.61
AC090888.3-201ENST00000558917 LRRC7Q96NW7 1537 aa11.2□□□□□ -0.62
AC090888.3-201ENST00000558917 TSR1Q2NL82 804 aaKnown RBP11.2□□□□□ -0.62
AC090888.3-201ENST00000558917 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
AC090888.3-201ENST00000558917 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.2□□□□□ -0.62
AC090888.3-201ENST00000558917 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
AC090888.3-201ENST00000558917 EN1Q05925 392 aaPredicted RBP11.19□□□□□ -0.62
AC090888.3-201ENST00000558917 PDIA6Q15084 440 aa11.19□□□□□ -0.62
AC090888.3-201ENST00000558917 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
AC090888.3-201ENST00000558917 PACS2Q86VP3 889 aa11.18□□□□□ -0.62
AC090888.3-201ENST00000558917 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
AC090888.3-201ENST00000558917 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.18□□□□□ -0.62
AC090888.3-201ENST00000558917 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
AC090888.3-201ENST00000558917 RNF17Q9BXT8 1623 aaKnown RBP11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 SPDYE16A6NNV3 312 aaPredicted RBP11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 KCNC4Q03721 635 aa11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 EFCAB2Q5VUJ9 269 aa11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 HPS5Q9UPZ3 1129 aa11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 PRXQ9BXM0 1461 aa11.17□□□□□ -0.62
AC090888.3-201ENST00000558917 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
AC090888.3-201ENST00000558917 A2ML1A8K2U0 1454 aa11.16□□□□□ -0.62
AC090888.3-201ENST00000558917 CDK13Q14004 1512 aaKnown RBP11.15□□□□□ -0.62
AC090888.3-201ENST00000558917 CLTCQ00610 1675 aaKnown RBP11.15□□□□□ -0.62
AC090888.3-201ENST00000558917 KIDINS220Q9ULH0 1771 aa11.15□□□□□ -0.62
AC090888.3-201ENST00000558917 E2F4Q16254 413 aa11.14□□□□□ -0.63
AC090888.3-201ENST00000558917 MYO5CQ9NQX4 1742 aa11.13□□□□□ -0.63
AC090888.3-201ENST00000558917 GRXCR2A6NFK2 248 aa11.13□□□□□ -0.63
AC090888.3-201ENST00000558917 TRIM52Q96A61 297 aa11.13□□□□□ -0.63
AC090888.3-201ENST00000558917 WDR70Q9NW82 654 aa11.13□□□□□ -0.63
AC090888.3-201ENST00000558917 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
AC090888.3-201ENST00000558917 KIF14Q15058 1648 aa11.11□□□□□ -0.63
AC090888.3-201ENST00000558917 SMAPO00193 183 aa11.11□□□□□ -0.63
AC090888.3-201ENST00000558917 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
AC090888.3-201ENST00000558917 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
AC090888.3-201ENST00000558917 XIRP1Q702N8 1843 aaKnown RBP11.11□□□□□ -0.63
AC090888.3-201ENST00000558917 PPP4CP60510 307 aa11.1□□□□□ -0.63
AC090888.3-201ENST00000558917 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
AC090888.3-201ENST00000558917 MED14O60244 1454 aa11.1□□□□□ -0.63
AC090888.3-201ENST00000558917 SETBP1Q9Y6X0 1596 aa11.1□□□□□ -0.63
AC090888.3-201ENST00000558917 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
AC090888.3-201ENST00000558917 FAM135BQ49AJ0 1406 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms