RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MED14O60244 1454 aa4.13□□□□□ -1.75
PRPF39-206ENST00000554429 UBE2Q2Q8WVN8 375 aa4.13□□□□□ -1.75
PRPF39-206ENST00000554429 CAMSAP2Q08AD1 1489 aa4.13□□□□□ -1.75
PRPF39-206ENST00000554429 A2MP01023 1474 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 MBD5Q9P267 1494 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 CEP162Q5TB80 1403 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 PKD2Q13563 968 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 VWDEQ8N2E2 1590 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 PZPP20742 1482 aa4.12□□□□□ -1.75
PRPF39-206ENST00000554429 MAP3K1Q13233 1512 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 IGSF3O75054 1194 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 PDE4CQ08493 712 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 ALKQ9UM73 1620 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 NLRP1Q9C000 1473 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 PSDA5PKW4 1024 aaPredicted RBP4.11□□□□□ -1.75
PRPF39-206ENST00000554429 ZMYM3Q14202 1370 aa4.11□□□□□ -1.75
PRPF39-206ENST00000554429 HSPA2P54652 639 aa4.1□□□□□ -1.75
PRPF39-206ENST00000554429 ADGRD1Q6QNK2 874 aa4.1□□□□□ -1.75
PRPF39-206ENST00000554429 IQGAP1P46940 1657 aa4.1□□□□□ -1.75
PRPF39-206ENST00000554429 CDK11BP21127 795 aaKnown RBP4.1□□□□□ -1.75
PRPF39-206ENST00000554429 CROCC2H7BZ55 1655 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 ARID3CA6NKF2 412 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 AFAP1Q8N556 730 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 STAC3Q96MF2 364 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 CFAP44Q96MT7 982 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 MROH1Q8NDA8 1641 aa4.09□□□□□ -1.75
PRPF39-206ENST00000554429 DHX29Q7Z478 1369 aaKnown RBP4.09□□□□□ -1.75
PRPF39-206ENST00000554429 XIRP1Q702N8 1843 aaKnown RBP4.09□□□□□ -1.76
PRPF39-206ENST00000554429 MED1Q15648 1581 aaPredicted RBP4.09□□□□□ -1.76
PRPF39-206ENST00000554429 UBR1Q8IWV7 1749 aa4.09□□□□□ -1.76
PRPF39-206ENST00000554429 STRCP1A6NGW2 1772 aa4.09□□□□□ -1.76
PRPF39-206ENST00000554429 RSPH4AQ5TD94 716 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 CCDC141Q6ZP82 1450 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 SLIT1O75093 1534 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 ARHGAP31Q2M1Z3 1444 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 NCOA2Q15596 1464 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 ARHGAP23Q9P227 1491 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 SHANK2Q9UPX8 1470 aa4.08□□□□□ -1.76
PRPF39-206ENST00000554429 PRDM15P57071 1507 aaPredicted RBP4.07□□□□□ -1.76
PRPF39-206ENST00000554429 LMTK2Q8IWU2 1503 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 ARHGAP33O14559 1287 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 HRO43593 1189 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 ZNF787Q6DD87 383 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 ABCC3O15438 1527 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 SPAG9O60271 1321 aaKnown RBP4.07□□□□□ -1.76
PRPF39-206ENST00000554429 NWD1Q149M9 1564 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 CEBPAP49715 358 aaPredicted RBP4.07□□□□□ -1.76
PRPF39-206ENST00000554429 STK17AQ9UEE5 414 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 CCNB3Q8WWL7 1395 aa4.07□□□□□ -1.76
PRPF39-206ENST00000554429 UGGT1Q9NYU2 1555 aa4.06□□□□□ -1.76
PRPF39-206ENST00000554429 CHRM1P11229 460 aaPredicted RBP4.06□□□□□ -1.76
PRPF39-206ENST00000554429 ILDR2Q71H61 639 aa4.06□□□□□ -1.76
PRPF39-206ENST00000554429 MLECQ14165 292 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 TNRQ92752 1358 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 MIA2Q96PC5 1412 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 ERVK-7P63135 1459 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 DUOX2Q9NRD8 1548 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 CEP152O94986 1710 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 NRG2O14511 850 aaPredicted RBP4.05□□□□□ -1.76
PRPF39-206ENST00000554429 BRD2P25440 801 aaKnown RBP4.05□□□□□ -1.76
PRPF39-206ENST00000554429 DISP3Q9P2K9 1392 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 ARID3AQ99856 593 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 PTPN23Q9H3S7 1636 aa4.05□□□□□ -1.76
PRPF39-206ENST00000554429 LRRC7Q96NW7 1537 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 NPHP4O75161 1426 aaPredicted RBP4.04□□□□□ -1.76
PRPF39-206ENST00000554429 ERBINQ96RT1 1412 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 ESF1Q9H501 851 aaKnown RBP4.04□□□□□ -1.76
PRPF39-206ENST00000554429 TET3O43151 1660 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 ARSIQ5FYB1 569 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 PLCD3Q8N3E9 789 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 PCDHB8Q9UN66 801 aa4.04□□□□□ -1.76
PRPF39-206ENST00000554429 NCKAP5LQ9HCH0 1330 aa4.03□□□□□ -1.76
PRPF39-206ENST00000554429 BCL11BQ9C0K0 894 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 CFDP1Q9UEE9 299 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 LRRC9Q6ZRR7 1453 aa4.03□□□□□ -1.76
PRPF39-206ENST00000554429 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 ZNF775Q96BV0 537 aaPredicted RBP4.03□□□□□ -1.76
PRPF39-206ENST00000554429 MTUS2Q5JR59 1369 aa4.03□□□□□ -1.76
PRPF39-206ENST00000554429 PIK3C2BO00750 1634 aa4.03□□□□□ -1.77
PRPF39-206ENST00000554429 NEFLP07196 543 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 TAF7LQ5H9L4 462 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 PPARGC1BQ86YN6 1023 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 KCTD12Q96CX2 325 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 PKNOX2Q96KN3 472 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 NKTRP30414 1462 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 GCC2Q8IWJ2 1684 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 CHD2O14647 1828 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 PSEN1P49768 467 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 HNRNPMP52272 730 aaKnown RBP eCLIP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 POLR3GLQ9BT43 218 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 SCAF11Q99590 1463 aaKnown RBP4.02□□□□□ -1.77
PRPF39-206ENST00000554429 NCOA3Q9Y6Q9 1424 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 DIP2AQ14689 1571 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 ADGRL2O95490 1459 aa4.02□□□□□ -1.77
PRPF39-206ENST00000554429 FAM135BQ49AJ0 1406 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 ADGRB3O60242 1522 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 RPRD2Q5VT52 1461 aaKnown RBP4.01□□□□□ -1.77
PRPF39-206ENST00000554429 THEMISQ8N1K5 641 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-206ENST00000554429 MYOM3Q5VTT5 1437 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 EFCAB6Q5THR3 1501 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms