RNA–Protein interactions for RNA: ENST00000525523.1

AC055860.1-201, humanhuman

TSL 5 BASIC

Gene AC055860.1, Length 688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055860.1-201ENST00000525523 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
AC055860.1-201ENST00000525523 MYOM3Q5VTT5 1437 aa11.8□□□□□ -0.52
AC055860.1-201ENST00000525523 HDGFP51858 240 aaKnown RBP11.8□□□□□ -0.52
AC055860.1-201ENST00000525523 USP21Q9UK80 565 aa11.8□□□□□ -0.52
AC055860.1-201ENST00000525523 PTPN23Q9H3S7 1636 aa11.79□□□□□ -0.52
AC055860.1-201ENST00000525523 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
AC055860.1-201ENST00000525523 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
AC055860.1-201ENST00000525523 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
AC055860.1-201ENST00000525523 FNBP4Q8N3X1 1017 aaPredicted RBP11.76□□□□□ -0.53
AC055860.1-201ENST00000525523 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.76□□□□□ -0.53
AC055860.1-201ENST00000525523 ADGRL3Q9HAR2 1447 aa11.76□□□□□ -0.53
AC055860.1-201ENST00000525523 IQGAP3Q86VI3 1631 aa11.75□□□□□ -0.53
AC055860.1-201ENST00000525523 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
AC055860.1-201ENST00000525523 SF3B2Q13435 895 aaKnown RBP11.74□□□□□ -0.53
AC055860.1-201ENST00000525523 PTPRUQ92729 1446 aa11.74□□□□□ -0.53
AC055860.1-201ENST00000525523 GLI3P10071 1580 aa11.74□□□□□ -0.53
AC055860.1-201ENST00000525523 MYOM2P54296 1465 aa11.73□□□□□ -0.53
AC055860.1-201ENST00000525523 REM2Q8IYK8 340 aaPredicted RBP11.72□□□□□ -0.53
AC055860.1-201ENST00000525523 RGPD1P0DJD0 1748 aa11.72□□□□□ -0.53
AC055860.1-201ENST00000525523 AMOTL2Q9Y2J4 779 aa11.71□□□□□ -0.53
AC055860.1-201ENST00000525523 C1orf167Q5SNV9 1468 aa11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 ABCC5O15440 1437 aa11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 YY1P25490 414 aa11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 DEFB132Q7Z7B7 95 aa11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 DDX17Q92841 729 aaKnown RBP11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 RRP7BPQ9NSQ0 103 aa11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
AC055860.1-201ENST00000525523 DAPK1P53355 1430 aa11.69□□□□□ -0.54
AC055860.1-201ENST00000525523 SOS2Q07890 1332 aaPredicted RBP11.69□□□□□ -0.54
AC055860.1-201ENST00000525523 HRCP23327 699 aa11.69□□□□□ -0.54
AC055860.1-201ENST00000525523 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
AC055860.1-201ENST00000525523 E9PCH4 1651 aa11.68□□□□□ -0.54
AC055860.1-201ENST00000525523 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
AC055860.1-201ENST00000525523 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
AC055860.1-201ENST00000525523 PSDA5PKW4 1024 aaPredicted RBP11.66□□□□□ -0.54
AC055860.1-201ENST00000525523 USP32Q8NFA0 1604 aa11.66□□□□□ -0.54
AC055860.1-201ENST00000525523 SLIT2O94813 1529 aa11.65□□□□□ -0.54
AC055860.1-201ENST00000525523 PLCH1Q4KWH8 1693 aa11.65□□□□□ -0.54
AC055860.1-201ENST00000525523 TNS1Q9HBL0 1735 aaKnown RBP11.64□□□□□ -0.55
AC055860.1-201ENST00000525523 BAG6P46379 1132 aa11.64□□□□□ -0.55
AC055860.1-201ENST00000525523 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
AC055860.1-201ENST00000525523 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
AC055860.1-201ENST00000525523 ADGRL2O95490 1459 aa11.63□□□□□ -0.55
AC055860.1-201ENST00000525523 ADGRB2O60241 1585 aa11.63□□□□□ -0.55
AC055860.1-201ENST00000525523 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
AC055860.1-201ENST00000525523 PXDNQ92626 1479 aa11.63□□□□□ -0.55
AC055860.1-201ENST00000525523 CDC42BPGQ6DT37 1551 aa11.62□□□□□ -0.55
AC055860.1-201ENST00000525523 DISP2A7MBM2 1401 aa11.6□□□□□ -0.55
AC055860.1-201ENST00000525523 UNC5CLQ8IV45 518 aa11.6□□□□□ -0.55
AC055860.1-201ENST00000525523 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
AC055860.1-201ENST00000525523 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
AC055860.1-201ENST00000525523 METP08581 1390 aa11.59□□□□□ -0.55
AC055860.1-201ENST00000525523 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
AC055860.1-201ENST00000525523 PRAG1Q86YV5 1406 aa11.59□□□□□ -0.55
AC055860.1-201ENST00000525523 ANKRD50Q9ULJ7 1429 aa11.59□□□□□ -0.55
AC055860.1-201ENST00000525523 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 SEPT12Q8IYM1 358 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 VPS8Q8N3P4 1428 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 KIF1AQ12756 1690 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 RREB1Q92766 1687 aa11.58□□□□□ -0.56
AC055860.1-201ENST00000525523 KRT27Q7Z3Y8 459 aa11.57□□□□□ -0.56
AC055860.1-201ENST00000525523 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
AC055860.1-201ENST00000525523 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
AC055860.1-201ENST00000525523 NRAPQ86VF7 1730 aa11.56□□□□□ -0.56
AC055860.1-201ENST00000525523 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
AC055860.1-201ENST00000525523 NEXMIFQ5QGS0 1516 aa11.55□□□□□ -0.56
AC055860.1-201ENST00000525523 NUP188Q5SRE5 1749 aa11.55□□□□□ -0.56
AC055860.1-201ENST00000525523 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
AC055860.1-201ENST00000525523 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
AC055860.1-201ENST00000525523 HFM1A2PYH4 1435 aa11.54□□□□□ -0.56
AC055860.1-201ENST00000525523 VPS72Q15906 364 aa11.54□□□□□ -0.56
AC055860.1-201ENST00000525523 CAMTA1Q9Y6Y1 1673 aa11.54□□□□□ -0.56
AC055860.1-201ENST00000525523 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
AC055860.1-201ENST00000525523 CHIC2Q9UKJ5 165 aa11.53□□□□□ -0.56
AC055860.1-201ENST00000525523 KIF1BO60333 1816 aa11.53□□□□□ -0.56
AC055860.1-201ENST00000525523 CHD4Q14839 1912 aa11.52□□□□□ -0.56
AC055860.1-201ENST00000525523 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
AC055860.1-201ENST00000525523 EN1Q05925 392 aaPredicted RBP11.52□□□□□ -0.57
AC055860.1-201ENST00000525523 THSD7AQ9UPZ6 1657 aa11.52□□□□□ -0.57
AC055860.1-201ENST00000525523 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
AC055860.1-201ENST00000525523 PARD3Q8TEW0 1356 aa11.51□□□□□ -0.57
AC055860.1-201ENST00000525523 ROBO2Q9HCK4 1378 aa11.51□□□□□ -0.57
AC055860.1-201ENST00000525523 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
AC055860.1-201ENST00000525523 FMN2Q9NZ56 1722 aa11.5□□□□□ -0.57
AC055860.1-201ENST00000525523 A0A0G2JS52 829 aa11.5□□□□□ -0.57
AC055860.1-201ENST00000525523 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC055860.1-201ENST00000525523 MYT1Q01538 1121 aa11.5□□□□□ -0.57
AC055860.1-201ENST00000525523 CCDC9Q9Y3X0 531 aaKnown RBP11.5□□□□□ -0.57
AC055860.1-201ENST00000525523 ESCO1Q5FWF5 840 aa11.48□□□□□ -0.57
AC055860.1-201ENST00000525523 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
AC055860.1-201ENST00000525523 TNS3Q68CZ2 1445 aa11.48□□□□□ -0.57
AC055860.1-201ENST00000525523 CLTCL1P53675 1640 aa11.48□□□□□ -0.57
AC055860.1-201ENST00000525523 COL14A1Q05707 1796 aaKnown RBP11.48□□□□□ -0.57
AC055860.1-201ENST00000525523 SPATA31A3Q5VYP0 1347 aa11.47□□□□□ -0.57
AC055860.1-201ENST00000525523 HAP1P54257 671 aaPredicted RBP11.47□□□□□ -0.57
AC055860.1-201ENST00000525523 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
AC055860.1-201ENST00000525523 KNDC1Q76NI1 1749 aa11.46□□□□□ -0.57
AC055860.1-201ENST00000525523 IFT172Q9UG01 1749 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms