RNA–Protein interactions for RNA: ENST00000502575.1

PDE4D-209, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-209ENST00000502575 KRTAP3-2Q9BYR7 98 aa13.82□□□□□ -0.2
PDE4D-209ENST00000502575 PCDHGA4Q9Y5G9 962 aa13.82□□□□□ -0.2
PDE4D-209ENST00000502575 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
PDE4D-209ENST00000502575 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
PDE4D-209ENST00000502575 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
PDE4D-209ENST00000502575 NPATQ14207 1427 aa13.81□□□□□ -0.2
PDE4D-209ENST00000502575 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
PDE4D-209ENST00000502575 MROH1Q8NDA8 1641 aa13.81□□□□□ -0.2
PDE4D-209ENST00000502575 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
PDE4D-209ENST00000502575 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
PDE4D-209ENST00000502575 GGT6Q6P531 493 aa13.8□□□□□ -0.2
PDE4D-209ENST00000502575 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
PDE4D-209ENST00000502575 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
PDE4D-209ENST00000502575 PTCD2Q8WV60 388 aaKnown RBP13.8□□□□□ -0.2
PDE4D-209ENST00000502575 DNMT1P26358 1616 aaKnown RBP13.79□□□□□ -0.2
PDE4D-209ENST00000502575 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
PDE4D-209ENST00000502575 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
PDE4D-209ENST00000502575 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
PDE4D-209ENST00000502575 NCOA1Q15788 1441 aa13.78□□□□□ -0.2
PDE4D-209ENST00000502575 TBC1D12O60347 775 aa13.77□□□□□ -0.21
PDE4D-209ENST00000502575 PDE4AP27815 886 aa13.77□□□□□ -0.21
PDE4D-209ENST00000502575 FBXO41Q8TF61 875 aa13.77□□□□□ -0.21
PDE4D-209ENST00000502575 FAM135AQ9P2D6 1515 aa13.76□□□□□ -0.21
PDE4D-209ENST00000502575 MIA2Q96PC5 1412 aa13.76□□□□□ -0.21
PDE4D-209ENST00000502575 DSG2Q14126 1118 aa13.76□□□□□ -0.21
PDE4D-209ENST00000502575 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
PDE4D-209ENST00000502575 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
PDE4D-209ENST00000502575 KIF3BO15066 747 aa13.74□□□□□ -0.21
PDE4D-209ENST00000502575 NUDT7P0C024 238 aa13.74□□□□□ -0.21
PDE4D-209ENST00000502575 BBXQ8WY36 941 aaPredicted RBP13.74□□□□□ -0.21
PDE4D-209ENST00000502575 ABCC3O15438 1527 aa13.74□□□□□ -0.21
PDE4D-209ENST00000502575 PZPP20742 1482 aa13.74□□□□□ -0.21
PDE4D-209ENST00000502575 PTPRTO14522 1441 aa13.73□□□□□ -0.21
PDE4D-209ENST00000502575 KHSRPQ92945 711 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■□□□□ 8
PDE4D-209ENST00000502575 NEURL4Q96JN8 1562 aa13.73□□□□□ -0.21
PDE4D-209ENST00000502575 PBX2P40425 430 aa13.72□□□□□ -0.21
PDE4D-209ENST00000502575 CERKQ8TCT0 537 aa13.72□□□□□ -0.21
PDE4D-209ENST00000502575 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
PDE4D-209ENST00000502575 SHANK2Q9UPX8 1470 aa13.72□□□□□ -0.21
PDE4D-209ENST00000502575 DUOX2Q9NRD8 1548 aa13.71□□□□□ -0.21
PDE4D-209ENST00000502575 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
PDE4D-209ENST00000502575 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
PDE4D-209ENST00000502575 RSPH4AQ5TD94 716 aa13.71□□□□□ -0.21
PDE4D-209ENST00000502575 TCOF1Q13428 1488 aaKnown RBP13.71□□□□□ -0.21
PDE4D-209ENST00000502575 FGD6Q6ZV73 1430 aa13.71□□□□□ -0.22
PDE4D-209ENST00000502575 PRDM15P57071 1507 aaPredicted RBP13.7□□□□□ -0.22
PDE4D-209ENST00000502575 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
PDE4D-209ENST00000502575 FBXO31Q5XUX0 539 aaPredicted RBP13.7□□□□□ -0.22
PDE4D-209ENST00000502575 ABCC5O15440 1437 aa13.7□□□□□ -0.22
PDE4D-209ENST00000502575 TSPY4P0CV99 314 aa13.69□□□□□ -0.22
PDE4D-209ENST00000502575 TSPY10P0CW01 314 aa13.69□□□□□ -0.22
PDE4D-209ENST00000502575 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
PDE4D-209ENST00000502575 DAPK1P53355 1430 aa13.69□□□□□ -0.22
PDE4D-209ENST00000502575 SPATA31D1Q6ZQQ2 1576 aa13.69□□□□□ -0.22
PDE4D-209ENST00000502575 MYO5BQ9ULV0 1848 aa13.69□□□□□ -0.22
PDE4D-209ENST00000502575 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
PDE4D-209ENST00000502575 LHX6Q9UPM6 363 aa13.68□□□□□ -0.22
PDE4D-209ENST00000502575 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
PDE4D-209ENST00000502575 PTGER2P43116 358 aa13.67□□□□□ -0.22
PDE4D-209ENST00000502575 TNRQ92752 1358 aa13.67□□□□□ -0.22
PDE4D-209ENST00000502575 WASHC2CQ9Y4E1 1318 aa13.66□□□□□ -0.22
PDE4D-209ENST00000502575 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
PDE4D-209ENST00000502575 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
PDE4D-209ENST00000502575 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
PDE4D-209ENST00000502575 KIF15Q9NS87 1388 aa13.65□□□□□ -0.22
PDE4D-209ENST00000502575 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
PDE4D-209ENST00000502575 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
PDE4D-209ENST00000502575 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
PDE4D-209ENST00000502575 MFSD10Q14728 455 aa13.64□□□□□ -0.23
PDE4D-209ENST00000502575 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
PDE4D-209ENST00000502575 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
PDE4D-209ENST00000502575 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
PDE4D-209ENST00000502575 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
PDE4D-209ENST00000502575 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
PDE4D-209ENST00000502575 ZNF335Q9H4Z2 1342 aaPredicted RBP13.62□□□□□ -0.23
PDE4D-209ENST00000502575 XIRP1Q702N8 1843 aaKnown RBP13.61□□□□□ -0.23
PDE4D-209ENST00000502575 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
PDE4D-209ENST00000502575 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
PDE4D-209ENST00000502575 RRP7BPQ9NSQ0 103 aa13.6□□□□□ -0.23
PDE4D-209ENST00000502575 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
PDE4D-209ENST00000502575 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
PDE4D-209ENST00000502575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDE4D-209ENST00000502575 SYNMO15061 1565 aa13.59□□□□□ -0.23
PDE4D-209ENST00000502575 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
PDE4D-209ENST00000502575 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
PDE4D-209ENST00000502575 EFCAB6Q5THR3 1501 aa13.58□□□□□ -0.24
PDE4D-209ENST00000502575 LSM11P83369 360 aaKnown RBP eCLIP13.57□□□□□ -0.24
PDE4D-209ENST00000502575 PPP4R3BQ5MIZ7 849 aa13.57□□□□□ -0.24
PDE4D-209ENST00000502575 UNC13BO14795 1591 aa13.57□□□□□ -0.24
PDE4D-209ENST00000502575 TET3O43151 1660 aa13.56□□□□□ -0.24
PDE4D-209ENST00000502575 LMTK2Q8IWU2 1503 aa13.56□□□□□ -0.24
PDE4D-209ENST00000502575 SPRYD3Q8NCJ5 442 aa13.56□□□□□ -0.24
PDE4D-209ENST00000502575 E9PCH4 1651 aa13.56□□□□□ -0.24
PDE4D-209ENST00000502575 MED14O60244 1454 aa13.55□□□□□ -0.24
PDE4D-209ENST00000502575 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
PDE4D-209ENST00000502575 ARHGAP31Q2M1Z3 1444 aa13.55□□□□□ -0.24
PDE4D-209ENST00000502575 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
PDE4D-209ENST00000502575 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
PDE4D-209ENST00000502575 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDE4D-209ENST00000502575 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms