RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 MFAP1P55081 439 aaKnown RBP13.21□□□□□ -0.29
COMMD4-203ENST00000480484 NEURL4Q96JN8 1562 aa13.21□□□□□ -0.29
COMMD4-203ENST00000480484 TRAPPC8Q9Y2L5 1435 aa13.2□□□□□ -0.3
COMMD4-203ENST00000480484 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
COMMD4-203ENST00000480484 MROH1Q8NDA8 1641 aa13.2□□□□□ -0.3
COMMD4-203ENST00000480484 PRAG1Q86YV5 1406 aa13.19□□□□□ -0.3
COMMD4-203ENST00000480484 MKRN3Q13064 507 aaKnown RBP13.19□□□□□ -0.3
COMMD4-203ENST00000480484 GPBP1L1Q9HC44 474 aaPredicted RBP13.19□□□□□ -0.3
COMMD4-203ENST00000480484 A2MP01023 1474 aa13.19□□□□□ -0.3
COMMD4-203ENST00000480484 LMTK2Q8IWU2 1503 aa13.18□□□□□ -0.3
COMMD4-203ENST00000480484 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
COMMD4-203ENST00000480484 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-203ENST00000480484 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
COMMD4-203ENST00000480484 TMCO4Q5TGY1 634 aa13.17□□□□□ -0.3
COMMD4-203ENST00000480484 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
COMMD4-203ENST00000480484 FER1L4A9Z1Z3 1794 aa13.17□□□□□ -0.3
COMMD4-203ENST00000480484 PRDM15P57071 1507 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-203ENST00000480484 MYCNP04198 464 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-203ENST00000480484 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
COMMD4-203ENST00000480484 IQGAP3Q86VI3 1631 aa13.16□□□□□ -0.3
COMMD4-203ENST00000480484 ZNF592Q92610 1267 aa13.16□□□□□ -0.3
COMMD4-203ENST00000480484 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
COMMD4-203ENST00000480484 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
COMMD4-203ENST00000480484 ARID4BQ4LE39 1312 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-203ENST00000480484 MYBBP1AQ9BQG0 1328 aaKnown RBP13.14□□□□□ -0.31
COMMD4-203ENST00000480484 FANCAO15360 1455 aa13.14□□□□□ -0.31
COMMD4-203ENST00000480484 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-203ENST00000480484 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
COMMD4-203ENST00000480484 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
COMMD4-203ENST00000480484 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
COMMD4-203ENST00000480484 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
COMMD4-203ENST00000480484 RGS3P49796 1198 aa13.13□□□□□ -0.31
COMMD4-203ENST00000480484 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
COMMD4-203ENST00000480484 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
COMMD4-203ENST00000480484 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
COMMD4-203ENST00000480484 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
COMMD4-203ENST00000480484 PKNOX2Q96KN3 472 aa13.11□□□□□ -0.31
COMMD4-203ENST00000480484 ERBINQ96RT1 1412 aa13.11□□□□□ -0.31
COMMD4-203ENST00000480484 E9PCH4 1651 aa13.11□□□□□ -0.31
COMMD4-203ENST00000480484 CCDC146Q8IYE0 955 aa13.11□□□□□ -0.31
COMMD4-203ENST00000480484 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
COMMD4-203ENST00000480484 RALBP1Q15311 655 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 PANK3Q9H999 370 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 SPINK5Q9NQ38 1064 aaPredicted RBP13.1□□□□□ -0.31
COMMD4-203ENST00000480484 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 TESK2Q96S53 571 aa13.1□□□□□ -0.31
COMMD4-203ENST00000480484 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-203ENST00000480484 PREX1Q8TCU6 1659 aa13.09□□□□□ -0.31
COMMD4-203ENST00000480484 NKX1-1Q15270 411 aaPredicted RBP13.09□□□□□ -0.31
COMMD4-203ENST00000480484 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
COMMD4-203ENST00000480484 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
COMMD4-203ENST00000480484 PIK3C2BO00750 1634 aa13.08□□□□□ -0.32
COMMD4-203ENST00000480484 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.32
COMMD4-203ENST00000480484 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
COMMD4-203ENST00000480484 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
COMMD4-203ENST00000480484 C3P01024 1663 aa13.07□□□□□ -0.32
COMMD4-203ENST00000480484 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
COMMD4-203ENST00000480484 ATP10AO60312 1499 aa13.05□□□□□ -0.32
COMMD4-203ENST00000480484 C8orf34Q49A92 452 aa13.05□□□□□ -0.32
COMMD4-203ENST00000480484 POGKQ9P215 609 aa13.05□□□□□ -0.32
COMMD4-203ENST00000480484 SEC24BO95487 1268 aa13.05□□□□□ -0.32
COMMD4-203ENST00000480484 TET3O43151 1660 aa13.04□□□□□ -0.32
COMMD4-203ENST00000480484 E9PSI1 815 aa13.04□□□□□ -0.32
COMMD4-203ENST00000480484 ADGRL1O94910 1474 aa13.04□□□□□ -0.32
COMMD4-203ENST00000480484 CAMSAP1Q5T5Y3 1602 aa13.04□□□□□ -0.32
COMMD4-203ENST00000480484 BCAR3O75815 825 aa13.04□□□□□ -0.32
COMMD4-203ENST00000480484 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
COMMD4-203ENST00000480484 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
COMMD4-203ENST00000480484 KIF3BO15066 747 aa13.03□□□□□ -0.32
COMMD4-203ENST00000480484 FGD1P98174 961 aa13.03□□□□□ -0.32
COMMD4-203ENST00000480484 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-203ENST00000480484 BCCIPQ9P287 314 aaKnown RBP eCLIP13.03□□□□□ -0.32
COMMD4-203ENST00000480484 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-203ENST00000480484 PARD3Q8TEW0 1356 aa13.03□□□□□ -0.32
COMMD4-203ENST00000480484 SLKQ9H2G2 1235 aaPredicted RBP13.03□□□□□ -0.32
COMMD4-203ENST00000480484 CYB5RLQ6IPT4 315 aa13.02□□□□□ -0.32
COMMD4-203ENST00000480484 KCNV2Q8TDN2 545 aa13.02□□□□□ -0.32
COMMD4-203ENST00000480484 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
COMMD4-203ENST00000480484 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.33
COMMD4-203ENST00000480484 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
COMMD4-203ENST00000480484 UGGT1Q9NYU2 1555 aa13.02□□□□□ -0.33
COMMD4-203ENST00000480484 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.01□□□□□ -0.33
COMMD4-203ENST00000480484 KDM2BQ8NHM5 1336 aa13.01□□□□□ -0.33
COMMD4-203ENST00000480484 LAMC1P11047 1609 aa13.01□□□□□ -0.33
COMMD4-203ENST00000480484 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
COMMD4-203ENST00000480484 TMF1P82094 1093 aa13□□□□□ -0.33
COMMD4-203ENST00000480484 NAP1L5Q96NT1 182 aaPredicted RBP13□□□□□ -0.33
COMMD4-203ENST00000480484 TRPM2O94759 1503 aa13□□□□□ -0.33
COMMD4-203ENST00000480484 SPHKAPQ2M3C7 1700 aa12.99□□□□□ -0.33
COMMD4-203ENST00000480484 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
COMMD4-203ENST00000480484 SPATA31D1Q6ZQQ2 1576 aa12.99□□□□□ -0.33
COMMD4-203ENST00000480484 IGHDP01880 384 aa12.99□□□□□ -0.33
COMMD4-203ENST00000480484 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
COMMD4-203ENST00000480484 DUSP27Q5VZP5 1158 aa12.98□□□□□ -0.33
COMMD4-203ENST00000480484 PTPRTO14522 1441 aa12.97□□□□□ -0.33
COMMD4-203ENST00000480484 CEP152O94986 1710 aa12.97□□□□□ -0.33
COMMD4-203ENST00000480484 PROM2Q8N271 834 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1385.7 ms