RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
COMMD4-203ENST00000480484 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
COMMD4-203ENST00000480484 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
COMMD4-203ENST00000480484 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
COMMD4-203ENST00000480484 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
COMMD4-203ENST00000480484 MT1BP07438 61 aa3.96□□□□□ -1.78
COMMD4-203ENST00000480484 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
COMMD4-203ENST00000480484 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
COMMD4-203ENST00000480484 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
COMMD4-203ENST00000480484 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
COMMD4-203ENST00000480484 MT1XP80297 61 aa3.91□□□□□ -1.78
COMMD4-203ENST00000480484 MT3P25713 68 aa3.9□□□□□ -1.78
COMMD4-203ENST00000480484 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
COMMD4-203ENST00000480484 KRTAP10-12P60413 245 aa3.88□□□□□ -1.79
COMMD4-203ENST00000480484 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
COMMD4-203ENST00000480484 CRCT1Q9UGL9 99 aa3.8□□□□□ -1.8
COMMD4-203ENST00000480484 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
COMMD4-203ENST00000480484 SSPOA2VEC9 5147 aa3.76□□□□□ -1.81
COMMD4-203ENST00000480484 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
COMMD4-203ENST00000480484 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
COMMD4-203ENST00000480484 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
COMMD4-203ENST00000480484 DSTQ03001 7570 aaKnown RBP3.67□□□□□ -1.82
COMMD4-203ENST00000480484 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
COMMD4-203ENST00000480484 FCGBPQ9Y6R7 5405 aaPredicted RBP3.61□□□□□ -1.83
COMMD4-203ENST00000480484 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
COMMD4-203ENST00000480484 KRTAP5-9P26371 169 aa3.51□□□□□ -1.85
COMMD4-203ENST00000480484 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
COMMD4-203ENST00000480484 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
COMMD4-203ENST00000480484 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
COMMD4-203ENST00000480484 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
COMMD4-203ENST00000480484 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
COMMD4-203ENST00000480484 SYNE1Q8NF91 8797 aaKnown RBP3.47□□□□□ -1.85
COMMD4-203ENST00000480484 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
COMMD4-203ENST00000480484 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
COMMD4-203ENST00000480484 KRTAP20-1Q3LI63 56 aa3.38□□□□□ -1.87
COMMD4-203ENST00000480484 MT1EP04732 61 aa3.37□□□□□ -1.87
COMMD4-203ENST00000480484 MT1LQ93083 61 aa3.36□□□□□ -1.87
COMMD4-203ENST00000480484 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.88
COMMD4-203ENST00000480484 MT1GP13640 62 aa3.3□□□□□ -1.88
COMMD4-203ENST00000480484 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
COMMD4-203ENST00000480484 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
COMMD4-203ENST00000480484 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
COMMD4-203ENST00000480484 MT1MQ8N339 61 aa3.16□□□□□ -1.9
COMMD4-203ENST00000480484 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.91
COMMD4-203ENST00000480484 NEBP20929 6669 aa3.15□□□□□ -1.91
COMMD4-203ENST00000480484 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
COMMD4-203ENST00000480484 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
COMMD4-203ENST00000480484 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
COMMD4-203ENST00000480484 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
COMMD4-203ENST00000480484 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
COMMD4-203ENST00000480484 GPR98Q8WXG9 6306 aa2.98□□□□□ -1.93
COMMD4-203ENST00000480484 PRM1P04553 51 aa2.95□□□□□ -1.94
COMMD4-203ENST00000480484 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
COMMD4-203ENST00000480484 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
COMMD4-203ENST00000480484 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
COMMD4-203ENST00000480484 MT1AP04731 61 aa2.87□□□□□ -1.95
COMMD4-203ENST00000480484 SPRR2EP22531 72 aa2.87□□□□□ -1.95
COMMD4-203ENST00000480484 SPRR2BP35325 72 aa2.87□□□□□ -1.95
COMMD4-203ENST00000480484 SPRR2AP35326 72 aa2.87□□□□□ -1.95
COMMD4-203ENST00000480484 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
COMMD4-203ENST00000480484 SPRR2DP22532 72 aa2.8□□□□□ -1.96
COMMD4-203ENST00000480484 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
COMMD4-203ENST00000480484 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
COMMD4-203ENST00000480484 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
COMMD4-203ENST00000480484 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
COMMD4-203ENST00000480484 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
COMMD4-203ENST00000480484 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
COMMD4-203ENST00000480484 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
COMMD4-203ENST00000480484 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
COMMD4-203ENST00000480484 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
COMMD4-203ENST00000480484 MT4P47944 62 aa2.49□□□□□ -2.01
COMMD4-203ENST00000480484 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
COMMD4-203ENST00000480484 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
COMMD4-203ENST00000480484 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
COMMD4-203ENST00000480484 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
COMMD4-203ENST00000480484 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
COMMD4-203ENST00000480484 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
COMMD4-203ENST00000480484 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 13.9 ms