RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.677e-14■■■■■ 92.7
COMMD4-203ENST00000480484 EFTUD2Q15029 972 aaKnown RBP eCLIP10.59□□□□□ -0.711e-7■■■■■ 52.3
COMMD4-203ENST00000480484 PCBP2Q15366 365 aaKnown RBP eCLIP10.1□□□□□ -0.791e-11■■■■■ 48
COMMD4-203ENST00000480484 PRPF4O43172 522 aaKnown RBP eCLIP10.59□□□□□ -0.712e-7■■■■■ 39.9
COMMD4-203ENST00000480484 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.29□□□□□ -0.763e-10■■■■■ 33.7
COMMD4-203ENST00000480484 LARP4Q71RC2 724 aaKnown RBP eCLIP10□□□□□ -0.814e-6■■■■■ 28.7
COMMD4-203ENST00000480484 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.474e-9■■■■■ 28.7
COMMD4-203ENST00000480484 SF3B4Q15427 424 aaKnown RBP eCLIP10.11□□□□□ -0.793e-6■■■■■ 28.5
COMMD4-203ENST00000480484 PPIGQ13427 754 aaKnown RBP eCLIP9.67□□□□□ -0.861e-6■■■■□ 25.8
COMMD4-203ENST00000480484 RPS3P23396 243 aaKnown RBP eCLIP9.68□□□□□ -0.869e-8■■■■□ 25.4
COMMD4-203ENST00000480484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.72□□□□□ -1.171e-8■■■■□ 24.7
COMMD4-203ENST00000480484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.97□□□□□ -0.652e-7■■□□□ 14.4
COMMD4-203ENST00000480484 PABPC4Q13310 644 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■■□□□ 13.1
COMMD4-203ENST00000480484 NCBP2P52298 156 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■□□□ 13
COMMD4-203ENST00000480484 DDX3XO00571 662 aaKnown RBP eCLIP10.8□□□□□ -0.683e-7■■□□□ 12.4
COMMD4-203ENST00000480484 G3BP1Q13283 466 aaKnown RBP eCLIP11.65□□□□□ -0.542e-6■□□□□ 9.5
Retrieved 16 of 16 RNA–protein pairs in 4.9 ms