RNA–Protein interactions for RNA: ENST00000478848.1

FMR1-211, Transcript of fragile X mental retardation 1, human

TSL 2

Gene FMR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-211	ENST00000478848	ONECUT3	O60422	494 aa	Predicted RBP	13.76	□□□□□ -0.21
FMR1-211	ENST00000478848	CHGA	P10645	457 aa	Known RBP	13.76	□□□□□ -0.21
FMR1-211	ENST00000478848	MYO5B	Q9ULV0	1848 aa		13.76	□□□□□ -0.21
FMR1-211	ENST00000478848	DUOX2	Q9NRD8	1548 aa		13.75	□□□□□ -0.21
FMR1-211	ENST00000478848	ADGRL3	Q9HAR2	1447 aa		13.75	□□□□□ -0.21
FMR1-211	ENST00000478848	MARF1	Q9Y4F3	1742 aa	Known RBP	13.75	□□□□□ -0.21
FMR1-211	ENST00000478848	SLIT2	O94813	1529 aa		13.74	□□□□□ -0.21
FMR1-211	ENST00000478848	KCNQ2	O43526	872 aa		13.74	□□□□□ -0.21
FMR1-211	ENST00000478848	VPS72	Q15906	364 aa		13.74	□□□□□ -0.21
FMR1-211	ENST00000478848	CAMKK2	Q96RR4	588 aa		13.74	□□□□□ -0.21
FMR1-211	ENST00000478848	LAMC1	P11047	1609 aa		13.73	□□□□□ -0.21
FMR1-211	ENST00000478848	XPC	Q01831	940 aa	Predicted RBP	13.73	□□□□□ -0.21
FMR1-211	ENST00000478848	RRP7BP	Q9NSQ0	103 aa		13.72	□□□□□ -0.21
FMR1-211	ENST00000478848	RPRD2	Q5VT52	1461 aa	Known RBP	13.72	□□□□□ -0.21
FMR1-211	ENST00000478848	DISP2	A7MBM2	1401 aa		13.72	□□□□□ -0.21
FMR1-211	ENST00000478848	RGPD1	P0DJD0	1748 aa		13.71	□□□□□ -0.21
FMR1-211	ENST00000478848	KIF15	Q9NS87	1388 aa		13.71	□□□□□ -0.22
FMR1-211	ENST00000478848	CAPN15	O75808	1086 aa		13.7	□□□□□ -0.22
FMR1-211	ENST00000478848	GCC2	Q8IWJ2	1684 aa		13.69	□□□□□ -0.22
FMR1-211	ENST00000478848	FAM98C	Q17RN3	349 aa	Known RBP	13.69	□□□□□ -0.22
FMR1-211	ENST00000478848	NBPF8	Q3BBV2	869 aa		13.69	□□□□□ -0.22
FMR1-211	ENST00000478848	NBPF14	Q5TI25	921 aa		13.69	□□□□□ -0.22
FMR1-211	ENST00000478848	XRN1	Q8IZH2	1706 aa	Known RBP	13.68	□□□□□ -0.22
FMR1-211	ENST00000478848	ERBIN	Q96RT1	1412 aa		13.68	□□□□□ -0.22
FMR1-211	ENST00000478848	LMTK2	Q8IWU2	1503 aa		13.68	□□□□□ -0.22
FMR1-211	ENST00000478848	TMEM131L	A2VDJ0	1609 aa		13.68	□□□□□ -0.22
FMR1-211	ENST00000478848	CHD4	Q14839	1912 aa		13.67	□□□□□ -0.22
FMR1-211	ENST00000478848	TRIM37	O94972	964 aa		13.67	□□□□□ -0.22
FMR1-211	ENST00000478848	APBA3	O96018	575 aa		13.67	□□□□□ -0.22
FMR1-211	ENST00000478848	NALCN	Q8IZF0	1738 aa		13.67	□□□□□ -0.22
FMR1-211	ENST00000478848	NPHP3	Q7Z494	1330 aa		13.65	□□□□□ -0.22
FMR1-211	ENST00000478848	FOXO3	O43524	673 aa		13.65	□□□□□ -0.22
FMR1-211	ENST00000478848	PLEKHG5	O94827	1062 aa		13.65	□□□□□ -0.22
FMR1-211	ENST00000478848	MET	P08581	1390 aa		13.65	□□□□□ -0.22
FMR1-211	ENST00000478848	TNS1	Q9HBL0	1735 aa	Known RBP	13.64	□□□□□ -0.23
FMR1-211	ENST00000478848	HAP1	P54257	671 aa	Predicted RBP	13.64	□□□□□ -0.23
FMR1-211	ENST00000478848	ESCO1	Q5FWF5	840 aa		13.64	□□□□□ -0.23
FMR1-211	ENST00000478848	PXDN	Q92626	1479 aa		13.63	□□□□□ -0.23
FMR1-211	ENST00000478848	SLC34A2	O95436	690 aa		13.63	□□□□□ -0.23
FMR1-211	ENST00000478848	PARD3	Q8TEW0	1356 aa		13.62	□□□□□ -0.23
FMR1-211	ENST00000478848	ADGRB2	O60241	1585 aa		13.61	□□□□□ -0.23
FMR1-211	ENST00000478848	USP32	Q8NFA0	1604 aa		13.6	□□□□□ -0.23
FMR1-211	ENST00000478848	CABLES1	Q8TDN4	633 aa		13.59	□□□□□ -0.23
FMR1-211	ENST00000478848	ADGRL2	O95490	1459 aa		13.59	□□□□□ -0.23
FMR1-211	ENST00000478848	NRK	Q7Z2Y5	1582 aa		13.58	□□□□□ -0.23
FMR1-211	ENST00000478848	SYT17	Q9BSW7	474 aa		13.58	□□□□□ -0.24
FMR1-211	ENST00000478848	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.58	□□□□□ -0.24
FMR1-211	ENST00000478848	NUP188	Q5SRE5	1749 aa		13.57	□□□□□ -0.24
FMR1-211	ENST00000478848	ZBTB7A	O95365	584 aa		13.57	□□□□□ -0.24
FMR1-211	ENST00000478848	PTPN23	Q9H3S7	1636 aa		13.57	□□□□□ -0.24
FMR1-211	ENST00000478848	NRXN3	Q9Y4C0	1643 aa		13.57	□□□□□ -0.24
FMR1-211	ENST00000478848	PLCH1	Q4KWH8	1693 aa		13.56	□□□□□ -0.24
FMR1-211	ENST00000478848	FAM83G	A6ND36	823 aa		13.56	□□□□□ -0.24
FMR1-211	ENST00000478848	HSPA6	P17066	643 aa		13.56	□□□□□ -0.24
FMR1-211	ENST00000478848	FAM196A	Q6ZSG2	479 aa		13.56	□□□□□ -0.24
FMR1-211	ENST00000478848	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.55	□□□□□ -0.24
FMR1-211	ENST00000478848	RREB1	Q92766	1687 aa		13.55	□□□□□ -0.24
FMR1-211	ENST00000478848	SPATA31A3	Q5VYP0	1347 aa		13.55	□□□□□ -0.24
FMR1-211	ENST00000478848	NWD2	Q9ULI1	1742 aa		13.55	□□□□□ -0.24
FMR1-211	ENST00000478848	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.54	□□□□□ -0.24
FMR1-211	ENST00000478848	LRPPRC	P42704	1394 aa	Known RBP	13.54	□□□□□ -0.24
FMR1-211	ENST00000478848	MYOM3	Q5VTT5	1437 aa		13.54	□□□□□ -0.24
FMR1-211	ENST00000478848	MYOM1	P52179	1685 aa		13.53	□□□□□ -0.24
FMR1-211	ENST00000478848	PTGER2	P43116	358 aa		13.53	□□□□□ -0.24
FMR1-211	ENST00000478848	ROBO2	Q9HCK4	1378 aa		13.53	□□□□□ -0.24
FMR1-211	ENST00000478848	NUTM2F	A1L443	756 aa		13.52	□□□□□ -0.25
FMR1-211	ENST00000478848	GPR162	Q16538	588 aa		13.52	□□□□□ -0.25
FMR1-211	ENST00000478848	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.52	□□□□□ -0.25
FMR1-211	ENST00000478848	BTG4	Q9NY30	223 aa		13.52	□□□□□ -0.25
FMR1-211	ENST00000478848	PRELP	P51888	382 aa		13.51	□□□□□ -0.25
FMR1-211	ENST00000478848	ABCC5	O15440	1437 aa		13.5	□□□□□ -0.25
FMR1-211	ENST00000478848	CHIC2	Q9UKJ5	165 aa		13.5	□□□□□ -0.25
FMR1-211	ENST00000478848	SPATA31A5	Q5VU36	1347 aa		13.49	□□□□□ -0.25
FMR1-211	ENST00000478848	SPATA31A7	Q8IWB4	1347 aa		13.49	□□□□□ -0.25
FMR1-211	ENST00000478848	LMOD2	Q6P5Q4	547 aa		13.49	□□□□□ -0.25
FMR1-211	ENST00000478848	ZNF326	Q5BKZ1	582 aa	Known RBP	13.48	□□□□□ -0.25
FMR1-211	ENST00000478848	KRT28	Q7Z3Y7	464 aa		13.48	□□□□□ -0.25
FMR1-211	ENST00000478848	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.48	□□□□□ -0.25
FMR1-211	ENST00000478848	SHANK3	Q9BYB0	1731 aa		13.47	□□□□□ -0.25
FMR1-211	ENST00000478848	GOLGB1	Q14789	3259 aa	Known RBP	13.47	□□□□□ -0.25
FMR1-211	ENST00000478848	TNS4	Q8IZW8	715 aa		13.47	□□□□□ -0.25
FMR1-211	ENST00000478848	DLC1	Q96QB1	1528 aa		13.46	□□□□□ -0.25
FMR1-211	ENST00000478848	PELP1	Q8IZL8	1130 aa	Known RBP	13.46	□□□□□ -0.25
FMR1-211	ENST00000478848	PCDH10	Q9P2E7	1040 aa		13.46	□□□□□ -0.25
FMR1-211	ENST00000478848	THSD7A	Q9UPZ6	1657 aa		13.46	□□□□□ -0.26
FMR1-211	ENST00000478848	CASZ1	Q86V15	1759 aa		13.45	□□□□□ -0.26
FMR1-211	ENST00000478848	ANKRD30A	Q9BXX3	1397 aa		13.45	□□□□□ -0.26
FMR1-211	ENST00000478848	NRAP	Q86VF7	1730 aa		13.44	□□□□□ -0.26
FMR1-211	ENST00000478848	CROCC2	H7BZ55	1655 aa		13.44	□□□□□ -0.26
FMR1-211	ENST00000478848	CCDC144A	A2RUR9	1427 aa		13.43	□□□□□ -0.26
FMR1-211	ENST00000478848	PDE3B	Q13370	1112 aa		13.43	□□□□□ -0.26
FMR1-211	ENST00000478848	TNS3	Q68CZ2	1445 aa		13.43	□□□□□ -0.26
FMR1-211	ENST00000478848	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.42	□□□□□ -0.26
FMR1-211	ENST00000478848	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.41	□□□□□ -0.26
FMR1-211	ENST00000478848	HFM1	A2PYH4	1435 aa		13.4	□□□□□ -0.26
FMR1-211	ENST00000478848	DAPK1	P53355	1430 aa		13.4	□□□□□ -0.26
FMR1-211	ENST00000478848	PSME1	Q06323	249 aa		13.4	□□□□□ -0.26
FMR1-211	ENST00000478848	ARX	Q96QS3	562 aa		13.4	□□□□□ -0.26
FMR1-211	ENST00000478848	CDC42BPG	Q6DT37	1551 aa		13.4	□□□□□ -0.26
FMR1-211	ENST00000478848	ATP10D	Q9P241	1426 aa		13.39	□□□□□ -0.27

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