RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 UPF1Q92900 1129 aaKnown RBP eCLIP9.81□□□□□ -0.84
SEC22A-202ENST00000466519 ITSN2Q9NZM3 1697 aa9.8□□□□□ -0.84
SEC22A-202ENST00000466519 CEP170BQ9Y4F5 1589 aaPredicted RBP9.8□□□□□ -0.84
SEC22A-202ENST00000466519 A2ML1A8K2U0 1454 aa9.8□□□□□ -0.84
SEC22A-202ENST00000466519 ZNF316A6NFI3 1004 aaPredicted RBP9.8□□□□□ -0.84
SEC22A-202ENST00000466519 ATP7AQ04656 1500 aa9.8□□□□□ -0.84
SEC22A-202ENST00000466519 DHX29Q7Z478 1369 aaKnown RBP9.79□□□□□ -0.84
SEC22A-202ENST00000466519 TNRQ92752 1358 aa9.79□□□□□ -0.84
SEC22A-202ENST00000466519 KIF3BO15066 747 aa9.79□□□□□ -0.84
SEC22A-202ENST00000466519 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
SEC22A-202ENST00000466519 FYCO1Q9BQS8 1478 aa9.79□□□□□ -0.84
SEC22A-202ENST00000466519 SHANK2Q9UPX8 1470 aa9.79□□□□□ -0.84
SEC22A-202ENST00000466519 MTUS2Q5JR59 1369 aa9.78□□□□□ -0.84
SEC22A-202ENST00000466519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.78□□□□□ -0.84
SEC22A-202ENST00000466519 MROH2AA6NES4 1674 aa9.78□□□□□ -0.84
SEC22A-202ENST00000466519 NUDT7P0C024 238 aa9.78□□□□□ -0.84
SEC22A-202ENST00000466519 E2F4Q16254 413 aa9.78□□□□□ -0.84
SEC22A-202ENST00000466519 PLXNC1O60486 1568 aa9.78□□□□□ -0.84
SEC22A-202ENST00000466519 WASHC2CQ9Y4E1 1318 aa9.78□□□□□ -0.84
SEC22A-202ENST00000466519 KHSRPQ92945 711 aaKnown RBP eCLIP9.77□□□□□ -0.856e-9■■■■■ 28.3
SEC22A-202ENST00000466519 EMILIN3Q9NT22 766 aa9.77□□□□□ -0.85
SEC22A-202ENST00000466519 MYO3AQ8NEV4 1616 aa9.77□□□□□ -0.85
SEC22A-202ENST00000466519 ERBB3P21860 1342 aa9.77□□□□□ -0.85
SEC22A-202ENST00000466519 CPS1P31327 1500 aa9.77□□□□□ -0.85
SEC22A-202ENST00000466519 LRRIQ1Q96JM4 1722 aa9.76□□□□□ -0.85
SEC22A-202ENST00000466519 RTEL1-TNFRSF6BF6WH68 1400 aa9.76□□□□□ -0.85
SEC22A-202ENST00000466519 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
SEC22A-202ENST00000466519 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
SEC22A-202ENST00000466519 MBD5Q9P267 1494 aa9.76□□□□□ -0.85
SEC22A-202ENST00000466519 CLTCQ00610 1675 aaKnown RBP9.76□□□□□ -0.85
SEC22A-202ENST00000466519 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
SEC22A-202ENST00000466519 MIA2Q96PC5 1412 aa9.75□□□□□ -0.85
SEC22A-202ENST00000466519 SUPT6HQ7KZ85 1726 aaKnown RBP9.75□□□□□ -0.85
SEC22A-202ENST00000466519 INO80Q9ULG1 1556 aaPredicted RBP9.75□□□□□ -0.85
SEC22A-202ENST00000466519 CDC42BPAQ5VT25 1732 aa9.74□□□□□ -0.85
SEC22A-202ENST00000466519 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
SEC22A-202ENST00000466519 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
SEC22A-202ENST00000466519 DNMT1P26358 1616 aaKnown RBP9.74□□□□□ -0.85
SEC22A-202ENST00000466519 ZNF142P52746 1687 aaPredicted RBP9.74□□□□□ -0.85
SEC22A-202ENST00000466519 NPHP4O75161 1426 aaPredicted RBP9.73□□□□□ -0.85
SEC22A-202ENST00000466519 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
SEC22A-202ENST00000466519 PCDH10Q9P2E7 1040 aa9.73□□□□□ -0.85
SEC22A-202ENST00000466519 PZPP20742 1482 aa9.72□□□□□ -0.85
SEC22A-202ENST00000466519 EVI5O60447 810 aa9.72□□□□□ -0.85
SEC22A-202ENST00000466519 VARS2Q5ST30 1063 aaKnown RBP9.72□□□□□ -0.85
SEC22A-202ENST00000466519 ARIH1Q9Y4X5 557 aaPredicted RBP9.72□□□□□ -0.85
SEC22A-202ENST00000466519 NEURL4Q96JN8 1562 aa9.71□□□□□ -0.85
SEC22A-202ENST00000466519 DPYSL4O14531 572 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 TSPY4P0CV99 314 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 TSPY10P0CW01 314 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 MED14O60244 1454 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 NLRP1Q9C000 1473 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 FAM135AQ9P2D6 1515 aa9.71□□□□□ -0.86
SEC22A-202ENST00000466519 VSIG10Q8N0Z9 540 aa9.7□□□□□ -0.86
SEC22A-202ENST00000466519 RGS17Q9UGC6 210 aaPredicted RBP9.7□□□□□ -0.86
SEC22A-202ENST00000466519 VWDEQ8N2E2 1590 aa9.7□□□□□ -0.86
SEC22A-202ENST00000466519 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
SEC22A-202ENST00000466519 KDM5DQ9BY66 1539 aa9.69□□□□□ -0.86
SEC22A-202ENST00000466519 UGGT1Q9NYU2 1555 aa9.69□□□□□ -0.86
SEC22A-202ENST00000466519 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
SEC22A-202ENST00000466519 SPDYE16A6NNV3 312 aaPredicted RBP9.68□□□□□ -0.86
SEC22A-202ENST00000466519 CDAN1Q8IWY9 1227 aa9.68□□□□□ -0.86
SEC22A-202ENST00000466519 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
SEC22A-202ENST00000466519 ALKQ9UM73 1620 aa9.67□□□□□ -0.86
SEC22A-202ENST00000466519 CCDC141Q6ZP82 1450 aa9.67□□□□□ -0.86
SEC22A-202ENST00000466519 PDIA6Q15084 440 aa9.67□□□□□ -0.86
SEC22A-202ENST00000466519 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
SEC22A-202ENST00000466519 TIAM1Q13009 1591 aa9.67□□□□□ -0.86
SEC22A-202ENST00000466519 POTEB3A0JP26 581 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 LTKP29376 864 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 TXNDC2Q86VQ3 553 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 KCNV2Q8TDN2 545 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 ADGBQ8N7X0 1667 aa9.66□□□□□ -0.86
SEC22A-202ENST00000466519 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
SEC22A-202ENST00000466519 EHBP1L1Q8N3D4 1523 aa9.64□□□□□ -0.87
SEC22A-202ENST00000466519 CAMSAP2Q08AD1 1489 aa9.64□□□□□ -0.87
SEC22A-202ENST00000466519 DEPDC5O75140 1603 aa9.64□□□□□ -0.87
SEC22A-202ENST00000466519 PBX2P40425 430 aa9.63□□□□□ -0.87
SEC22A-202ENST00000466519 POTEAQ6S8J7 498 aa9.63□□□□□ -0.87
SEC22A-202ENST00000466519 KDM2AQ9Y2K7 1162 aa9.63□□□□□ -0.87
SEC22A-202ENST00000466519 EID1Q9Y6B2 187 aa9.63□□□□□ -0.87
SEC22A-202ENST00000466519 NCOA2Q15596 1464 aa9.63□□□□□ -0.87
SEC22A-202ENST00000466519 FOSBP53539 338 aa9.62□□□□□ -0.87
SEC22A-202ENST00000466519 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
SEC22A-202ENST00000466519 ERVK-7P63135 1459 aa9.61□□□□□ -0.87
SEC22A-202ENST00000466519 SCAF11Q99590 1463 aaKnown RBP9.61□□□□□ -0.87
SEC22A-202ENST00000466519 PTGER2P43116 358 aa9.61□□□□□ -0.87
SEC22A-202ENST00000466519 FAM135BQ49AJ0 1406 aa9.61□□□□□ -0.87
SEC22A-202ENST00000466519 ABCC3O15438 1527 aa9.61□□□□□ -0.87
SEC22A-202ENST00000466519 POLR1AO95602 1720 aaPredicted RBP9.6□□□□□ -0.87
SEC22A-202ENST00000466519 IQGAP1P46940 1657 aa9.59□□□□□ -0.87
SEC22A-202ENST00000466519 PHF14O94880 888 aa9.59□□□□□ -0.87
SEC22A-202ENST00000466519 KCNA6P17658 529 aa9.59□□□□□ -0.87
SEC22A-202ENST00000466519 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
SEC22A-202ENST00000466519 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
SEC22A-202ENST00000466519 TMEM94Q12767 1356 aa9.59□□□□□ -0.87
SEC22A-202ENST00000466519 RNF17Q9BXT8 1623 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms