RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 AEBP2Q6ZN18 517 aaPredicted RBP21.83■■□□□ 1.09
SEC22A-202ENST00000466519 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
SEC22A-202ENST00000466519 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
SEC22A-202ENST00000466519 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
SEC22A-202ENST00000466519 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
SEC22A-202ENST00000466519 FOXD1Q16676 465 aa17.24■□□□□ 0.35
SEC22A-202ENST00000466519 ADRA2BP18089 450 aa16.44■□□□□ 0.22
SEC22A-202ENST00000466519 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
SEC22A-202ENST00000466519 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
SEC22A-202ENST00000466519 MSH5O43196 834 aa16.05■□□□□ 0.16
SEC22A-202ENST00000466519 NISCHQ9Y2I1 1504 aa15.29■□□□□ 0.04
SEC22A-202ENST00000466519 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
SEC22A-202ENST00000466519 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
SEC22A-202ENST00000466519 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
SEC22A-202ENST00000466519 DMRT2Q9Y5R5 561 aa14.84□□□□□ -0.03
SEC22A-202ENST00000466519 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
SEC22A-202ENST00000466519 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
SEC22A-202ENST00000466519 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
SEC22A-202ENST00000466519 KCNA4P22459 653 aa14.62□□□□□ -0.07
SEC22A-202ENST00000466519 RNF216Q9NWF9 866 aaPredicted RBP14.53□□□□□ -0.08
SEC22A-202ENST00000466519 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
SEC22A-202ENST00000466519 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
SEC22A-202ENST00000466519 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
SEC22A-202ENST00000466519 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
SEC22A-202ENST00000466519 ABCC9O60706 1549 aa14.08□□□□□ -0.16
SEC22A-202ENST00000466519 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
SEC22A-202ENST00000466519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEC22A-202ENST00000466519 RNF39Q9H2S5 420 aa13.69□□□□□ -0.22
SEC22A-202ENST00000466519 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
SEC22A-202ENST00000466519 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
SEC22A-202ENST00000466519 C1QBPQ07021 282 aaKnown RBP13.56□□□□□ -0.24
SEC22A-202ENST00000466519 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
SEC22A-202ENST00000466519 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
SEC22A-202ENST00000466519 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
SEC22A-202ENST00000466519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
SEC22A-202ENST00000466519 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
SEC22A-202ENST00000466519 ZBTB22O15209 634 aa13.42□□□□□ -0.26
SEC22A-202ENST00000466519 CACNB1Q02641 598 aaPredicted RBP13.42□□□□□ -0.26
SEC22A-202ENST00000466519 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
SEC22A-202ENST00000466519 EHMT2Q96KQ7 1210 aa13.36□□□□□ -0.27
SEC22A-202ENST00000466519 APLP2Q06481 763 aa13.35□□□□□ -0.27
SEC22A-202ENST00000466519 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
SEC22A-202ENST00000466519 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
SEC22A-202ENST00000466519 CAPN15O75808 1086 aa13.17□□□□□ -0.3
SEC22A-202ENST00000466519 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
SEC22A-202ENST00000466519 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
SEC22A-202ENST00000466519 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
SEC22A-202ENST00000466519 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
SEC22A-202ENST00000466519 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
SEC22A-202ENST00000466519 NACADO15069 1562 aa13.09□□□□□ -0.31
SEC22A-202ENST00000466519 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
SEC22A-202ENST00000466519 ATF5Q9Y2D1 282 aaPredicted RBP12.98□□□□□ -0.33
SEC22A-202ENST00000466519 DSG3P32926 999 aa12.97□□□□□ -0.33
SEC22A-202ENST00000466519 ABCB7O75027 752 aa12.87□□□□□ -0.35
SEC22A-202ENST00000466519 MYO15BQ96JP2 1530 aa12.85□□□□□ -0.35
SEC22A-202ENST00000466519 BICRAQ9NZM4 1560 aa12.85□□□□□ -0.35
SEC22A-202ENST00000466519 POLA2Q14181 598 aa12.81□□□□□ -0.36
SEC22A-202ENST00000466519 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
SEC22A-202ENST00000466519 ZBTB12Q9Y330 459 aaPredicted RBP12.71□□□□□ -0.37
SEC22A-202ENST00000466519 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
SEC22A-202ENST00000466519 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
SEC22A-202ENST00000466519 CC2D2AQ9P2K1 1620 aa12.63□□□□□ -0.39
SEC22A-202ENST00000466519 ZCCHC6Q5VYS8 1495 aaKnown RBP12.6□□□□□ -0.39
SEC22A-202ENST00000466519 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
SEC22A-202ENST00000466519 FBLN2P98095 1184 aa12.57□□□□□ -0.4
SEC22A-202ENST00000466519 DNAJC5Q9H3Z4 198 aa12.57□□□□□ -0.4
SEC22A-202ENST00000466519 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
SEC22A-202ENST00000466519 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
SEC22A-202ENST00000466519 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
SEC22A-202ENST00000466519 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
SEC22A-202ENST00000466519 OSCARQ8IYS5 282 aa12.41□□□□□ -0.42
SEC22A-202ENST00000466519 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
SEC22A-202ENST00000466519 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
SEC22A-202ENST00000466519 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
SEC22A-202ENST00000466519 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
SEC22A-202ENST00000466519 CUX2O14529 1486 aa12.21□□□□□ -0.46
SEC22A-202ENST00000466519 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
SEC22A-202ENST00000466519 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
SEC22A-202ENST00000466519 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
SEC22A-202ENST00000466519 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
SEC22A-202ENST00000466519 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
SEC22A-202ENST00000466519 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
SEC22A-202ENST00000466519 REM2Q8IYK8 340 aaPredicted RBP12.07□□□□□ -0.48
SEC22A-202ENST00000466519 FKBP8Q14318 412 aa12.02□□□□□ -0.49
SEC22A-202ENST00000466519 NESP48681 1621 aa12.01□□□□□ -0.49
SEC22A-202ENST00000466519 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
SEC22A-202ENST00000466519 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
SEC22A-202ENST00000466519 HMGXB3Q12766 1538 aa11.96□□□□□ -0.49
SEC22A-202ENST00000466519 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
SEC22A-202ENST00000466519 PROM2Q8N271 834 aa11.93□□□□□ -0.5
SEC22A-202ENST00000466519 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
SEC22A-202ENST00000466519 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
SEC22A-202ENST00000466519 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
SEC22A-202ENST00000466519 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
SEC22A-202ENST00000466519 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
SEC22A-202ENST00000466519 PDS5BQ9NTI5 1447 aa11.87□□□□□ -0.51
SEC22A-202ENST00000466519 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
SEC22A-202ENST00000466519 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
SEC22A-202ENST00000466519 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
SEC22A-202ENST00000466519 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms