RNA–Protein interactions for RNA: ENST00000438075.6

LST1-217, leukocyte specific transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LST1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-217ENST00000438075 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
LST1-217ENST00000438075 POTEB3A0JP26 581 aa18.62■□□□□ 0.57
LST1-217ENST00000438075 POTEBQ6S5H4 581 aa18.62■□□□□ 0.57
LST1-217ENST00000438075 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
LST1-217ENST00000438075 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
LST1-217ENST00000438075 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
LST1-217ENST00000438075 NCOA1Q15788 1441 aa18.6■□□□□ 0.57
LST1-217ENST00000438075 PDE4AP27815 886 aa18.6■□□□□ 0.57
LST1-217ENST00000438075 ARSIQ5FYB1 569 aa18.6■□□□□ 0.57
LST1-217ENST00000438075 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
LST1-217ENST00000438075 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
LST1-217ENST00000438075 PTPN23Q9H3S7 1636 aa18.6■□□□□ 0.57
LST1-217ENST00000438075 MFSD10Q14728 455 aa18.59■□□□□ 0.57
LST1-217ENST00000438075 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
LST1-217ENST00000438075 KHSRPQ92945 711 aaKnown RBP eCLIP18.58■□□□□ 0.56
LST1-217ENST00000438075 RNF17Q9BXT8 1623 aaKnown RBP18.58■□□□□ 0.56
LST1-217ENST00000438075 FAM135AQ9P2D6 1515 aa18.58■□□□□ 0.56
LST1-217ENST00000438075 PPP1R15BQ5SWA1 713 aa18.57■□□□□ 0.56
LST1-217ENST00000438075 PTPRTO14522 1441 aa18.57■□□□□ 0.56
LST1-217ENST00000438075 EIF2AK4Q9P2K8 1649 aaKnown RBP18.56■□□□□ 0.56
LST1-217ENST00000438075 HS3ST6Q96QI5 342 aa18.56■□□□□ 0.56
LST1-217ENST00000438075 PCDHGA4Q9Y5G9 962 aa18.56■□□□□ 0.56
LST1-217ENST00000438075 FAM205CA6NFA0 338 aa18.55■□□□□ 0.56
LST1-217ENST00000438075 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
LST1-217ENST00000438075 PTCD2Q8WV60 388 aaKnown RBP18.55■□□□□ 0.56
LST1-217ENST00000438075 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
LST1-217ENST00000438075 WASHC2CQ9Y4E1 1318 aa18.54■□□□□ 0.56
LST1-217ENST00000438075 ZC3H13Q5T200 1668 aaKnown RBP18.54■□□□□ 0.56
LST1-217ENST00000438075 PZPP20742 1482 aa18.54■□□□□ 0.56
LST1-217ENST00000438075 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.56
LST1-217ENST00000438075 CEP152O94986 1710 aa18.52■□□□□ 0.56
LST1-217ENST00000438075 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
LST1-217ENST00000438075 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
LST1-217ENST00000438075 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
LST1-217ENST00000438075 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.55
LST1-217ENST00000438075 A2ML1A8K2U0 1454 aa18.52■□□□□ 0.55
LST1-217ENST00000438075 ABCC3O15438 1527 aa18.51■□□□□ 0.55
LST1-217ENST00000438075 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
LST1-217ENST00000438075 TNRQ92752 1358 aa18.51■□□□□ 0.55
LST1-217ENST00000438075 PLA2R1Q13018 1463 aa18.51■□□□□ 0.55
LST1-217ENST00000438075 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
LST1-217ENST00000438075 ABCC5O15440 1437 aa18.5■□□□□ 0.55
LST1-217ENST00000438075 DDX27Q96GQ7 796 aaKnown RBP18.5■□□□□ 0.55
LST1-217ENST00000438075 DAPK1P53355 1430 aa18.49■□□□□ 0.55
LST1-217ENST00000438075 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
LST1-217ENST00000438075 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
LST1-217ENST00000438075 LTBP4Q8N2S1 1624 aa18.48■□□□□ 0.55
LST1-217ENST00000438075 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
LST1-217ENST00000438075 NUDT7P0C024 238 aa18.46■□□□□ 0.55
LST1-217ENST00000438075 OXER1Q8TDS5 423 aa18.46■□□□□ 0.55
LST1-217ENST00000438075 ERBB3P21860 1342 aa18.46■□□□□ 0.55
LST1-217ENST00000438075 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
LST1-217ENST00000438075 ERBINQ96RT1 1412 aa18.44■□□□□ 0.54
LST1-217ENST00000438075 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
LST1-217ENST00000438075 CFAP65Q6ZU64 1925 aaKnown RBP18.43■□□□□ 0.54
LST1-217ENST00000438075 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
LST1-217ENST00000438075 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
LST1-217ENST00000438075 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
LST1-217ENST00000438075 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
LST1-217ENST00000438075 VARS2Q5ST30 1063 aaKnown RBP18.42■□□□□ 0.54
LST1-217ENST00000438075 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
LST1-217ENST00000438075 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
LST1-217ENST00000438075 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
LST1-217ENST00000438075 ERVK-7P63135 1459 aa18.41■□□□□ 0.54
LST1-217ENST00000438075 ZNF335Q9H4Z2 1342 aaPredicted RBP18.41■□□□□ 0.54
LST1-217ENST00000438075 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
LST1-217ENST00000438075 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.53
LST1-217ENST00000438075 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
LST1-217ENST00000438075 KRTAP3-3Q9BYR6 98 aa18.37■□□□□ 0.53
LST1-217ENST00000438075 KRTAP3-2Q9BYR7 98 aa18.37■□□□□ 0.53
LST1-217ENST00000438075 IQSEC2Q5JU85 1478 aa18.36■□□□□ 0.53
LST1-217ENST00000438075 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
LST1-217ENST00000438075 LHX6Q9UPM6 363 aa18.36■□□□□ 0.53
LST1-217ENST00000438075 UBR1Q8IWV7 1749 aa18.35■□□□□ 0.53
LST1-217ENST00000438075 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
LST1-217ENST00000438075 ADGRL2O95490 1459 aa18.34■□□□□ 0.53
LST1-217ENST00000438075 CAMK2BQ13554 666 aa18.34■□□□□ 0.53
LST1-217ENST00000438075 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
LST1-217ENST00000438075 KANK1Q14678 1352 aa18.33■□□□□ 0.53
LST1-217ENST00000438075 IQGAP1P46940 1657 aa18.32■□□□□ 0.52
LST1-217ENST00000438075 TBC1D12O60347 775 aa18.32■□□□□ 0.52
LST1-217ENST00000438075 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
LST1-217ENST00000438075 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
LST1-217ENST00000438075 ZNF687Q8N1G0 1237 aa18.31■□□□□ 0.52
LST1-217ENST00000438075 NPHP4O75161 1426 aaPredicted RBP18.31■□□□□ 0.52
LST1-217ENST00000438075 VWDEQ8N2E2 1590 aa18.3■□□□□ 0.52
LST1-217ENST00000438075 PIK3C2BO00750 1634 aa18.29■□□□□ 0.52
LST1-217ENST00000438075 LMTK2Q8IWU2 1503 aa18.28■□□□□ 0.52
LST1-217ENST00000438075 MED14O60244 1454 aa18.28■□□□□ 0.52
LST1-217ENST00000438075 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
LST1-217ENST00000438075 PPARGC1BQ86YN6 1023 aaKnown RBP18.27■□□□□ 0.52
LST1-217ENST00000438075 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
LST1-217ENST00000438075 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
LST1-217ENST00000438075 CPS1P31327 1500 aa18.25■□□□□ 0.51
LST1-217ENST00000438075 SYNMO15061 1565 aa18.25■□□□□ 0.51
LST1-217ENST00000438075 UBAP1LF5GYI3 381 aa18.24■□□□□ 0.51
LST1-217ENST00000438075 SCAF11Q99590 1463 aaKnown RBP18.23■□□□□ 0.51
LST1-217ENST00000438075 STRCP1A6NGW2 1772 aa18.22■□□□□ 0.51
LST1-217ENST00000438075 SLIT1O75093 1534 aa18.22■□□□□ 0.51
LST1-217ENST00000438075 TET3O43151 1660 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms