RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.7
NDE1-202ENST00000396355 PLA2R1Q13018 1463 aa10.71□□□□□ -0.7
NDE1-202ENST00000396355 TRERF1Q96PN7 1200 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 ESPNB1AK53 854 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 UNC13BO14795 1591 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 CERS3Q8IU89 383 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 MYO5CQ9NQX4 1742 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 TPM2P07951 284 aa10.69□□□□□ -0.7
NDE1-202ENST00000396355 CBX1P83916 185 aa10.69□□□□□ -0.7
NDE1-202ENST00000396355 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
NDE1-202ENST00000396355 SMG6Q86US8 1419 aaKnown RBP10.69□□□□□ -0.7
NDE1-202ENST00000396355 EXOC6Q8TAG9 804 aa10.68□□□□□ -0.7
NDE1-202ENST00000396355 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
NDE1-202ENST00000396355 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
NDE1-202ENST00000396355 CFAP74Q9C0B2 1584 aa10.68□□□□□ -0.7
NDE1-202ENST00000396355 PRAG1Q86YV5 1406 aa10.68□□□□□ -0.7
NDE1-202ENST00000396355 MAST1Q9Y2H9 1570 aa10.67□□□□□ -0.7
NDE1-202ENST00000396355 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
NDE1-202ENST00000396355 SETD1BQ9UPS6 1966 aaKnown RBP10.67□□□□□ -0.7
NDE1-202ENST00000396355 A2MP01023 1474 aa10.67□□□□□ -0.7
NDE1-202ENST00000396355 PTMSP20962 102 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
NDE1-202ENST00000396355 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 IQGAP3Q86VI3 1631 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 LRPPRCP42704 1394 aaKnown RBP10.66□□□□□ -0.7
NDE1-202ENST00000396355 TNRQ92752 1358 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 PLXNC1O60486 1568 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 NBPF1Q3BBV0 1214 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 ADAMTSL3P82987 1691 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 SLC26A8Q96RN1 970 aa10.65□□□□□ -0.71
NDE1-202ENST00000396355 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
NDE1-202ENST00000396355 CALD1Q05682 793 aaKnown RBP10.64□□□□□ -0.71
NDE1-202ENST00000396355 NUDCQ9Y266 331 aa10.64□□□□□ -0.71
NDE1-202ENST00000396355 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
NDE1-202ENST00000396355 PLIN1O60240 522 aa10.63□□□□□ -0.71
NDE1-202ENST00000396355 PRDM15P57071 1507 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 RGL3Q3MIN7 710 aa10.63□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 PTPRTO14522 1441 aa10.63□□□□□ -0.71
NDE1-202ENST00000396355 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
NDE1-202ENST00000396355 MAP7D2Q96T17 732 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 MPNDQ8N594 471 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 GPRASP1Q5JY77 1395 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 UQCRHLA0A096LP55 91 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 UQCRHP07919 91 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 LAMC1P11047 1609 aa10.61□□□□□ -0.71
NDE1-202ENST00000396355 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 FER1L4A9Z1Z3 1794 aa10.61□□□□□ -0.71
NDE1-202ENST00000396355 IRX3P78415 501 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 PARD3Q8TEW0 1356 aa10.61□□□□□ -0.71
NDE1-202ENST00000396355 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
NDE1-202ENST00000396355 BRD4O60885 1362 aaPredicted RBP10.6□□□□□ -0.71
NDE1-202ENST00000396355 KANK1Q14678 1352 aa10.6□□□□□ -0.71
NDE1-202ENST00000396355 TESK2Q96S53 571 aa10.6□□□□□ -0.71
NDE1-202ENST00000396355 RNF17Q9BXT8 1623 aaKnown RBP10.6□□□□□ -0.71
NDE1-202ENST00000396355 CLCN1P35523 988 aa10.6□□□□□ -0.71
NDE1-202ENST00000396355 KCNJ4P48050 445 aa10.59□□□□□ -0.71
NDE1-202ENST00000396355 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
NDE1-202ENST00000396355 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 ABCC1P33527 1531 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 MLH3Q9UHC1 1453 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.58□□□□□ -0.72
NDE1-202ENST00000396355 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
NDE1-202ENST00000396355 CAMSAP1Q5T5Y3 1602 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 ATF3P18847 181 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 TNNT1P13805 278 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 ZBTB9Q96C00 473 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 KTN1Q86UP2 1357 aaKnown RBP10.57□□□□□ -0.72
NDE1-202ENST00000396355 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 XRCC6P12956 609 aaKnown RBP eCLIP10.56□□□□□ -0.728e-7■■□□□ 11.8
NDE1-202ENST00000396355 MRE11P49959 708 aa10.56□□□□□ -0.72
NDE1-202ENST00000396355 RALBP1Q15311 655 aa10.56□□□□□ -0.72
NDE1-202ENST00000396355 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 ERBINQ96RT1 1412 aa10.56□□□□□ -0.72
NDE1-202ENST00000396355 EIF2AK4Q9P2K8 1649 aaKnown RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 CHAF1AQ13111 956 aaPredicted RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 BRD2P25440 801 aaKnown RBP10.55□□□□□ -0.72
NDE1-202ENST00000396355 HSP90AB1P08238 724 aaKnown RBP10.55□□□□□ -0.72
NDE1-202ENST00000396355 SPATA31D1Q6ZQQ2 1576 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 RCAN3Q9UKA8 241 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 TRAK2O60296 914 aa10.54□□□□□ -0.72
NDE1-202ENST00000396355 XPCQ01831 940 aaPredicted RBP10.54□□□□□ -0.72
NDE1-202ENST00000396355 NLRP13Q86W25 1043 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 355 ms