RNA–Protein interactions for RNA: ENST00000325438.12

PACS2-201, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACS2, Length 3,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-201ENST00000325438 NGEFQ8N5V2 710 aa29.71■■■□□ 2.35
PACS2-201ENST00000325438 TPM2P07951 284 aa29.71■■■□□ 2.35
PACS2-201ENST00000325438 CARD14Q9BXL6 1004 aa29.71■■■□□ 2.35
PACS2-201ENST00000325438 XPCQ01831 940 aaPredicted RBP29.7■■■□□ 2.35
PACS2-201ENST00000325438 RIPK4P57078 832 aa29.7■■■□□ 2.34
PACS2-201ENST00000325438 TRIM27P14373 513 aa29.7■■■□□ 2.34
PACS2-201ENST00000325438 ERBB4Q15303 1308 aa29.7■■■□□ 2.34
PACS2-201ENST00000325438 FSD2A1L4K1 749 aa29.69■■■□□ 2.34
PACS2-201ENST00000325438 GGNBP2Q9H3C7 697 aa29.68■■■□□ 2.34
PACS2-201ENST00000325438 PRPF40AO75400 957 aaKnown RBP29.67■■■□□ 2.34
PACS2-201ENST00000325438 ATF7IPQ6VMQ6 1270 aa29.67■■■□□ 2.34
PACS2-201ENST00000325438 AFAP1Q8N556 730 aa29.67■■■□□ 2.34
PACS2-201ENST00000325438 ARHGEF12Q9NZN5 1544 aa29.67■■■□□ 2.34
PACS2-201ENST00000325438 MAGI2Q86UL8 1455 aa29.67■■■□□ 2.34
PACS2-201ENST00000325438 CCDC173Q0VFZ6 552 aa29.67■■■□□ 2.34
PACS2-201ENST00000325438 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.67■■■□□ 2.34
PACS2-201ENST00000325438 ZSCAN30Q86W11 494 aa29.66■■■□□ 2.34
PACS2-201ENST00000325438 TRMT2AQ8IZ69 625 aaKnown RBP29.65■■■□□ 2.34
PACS2-201ENST00000325438 PRDM10Q9NQV6 1147 aa29.65■■■□□ 2.34
PACS2-201ENST00000325438 SPAG9O60271 1321 aaKnown RBP29.64■■■□□ 2.34
PACS2-201ENST00000325438 K7ELQ4 463 aaPredicted RBP29.64■■■□□ 2.34
PACS2-201ENST00000325438 PTMSP20962 102 aa29.64■■■□□ 2.34
PACS2-201ENST00000325438 A2MP01023 1474 aa29.64■■■□□ 2.34
PACS2-201ENST00000325438 WDR63Q8IWG1 891 aa29.63■■■□□ 2.33
PACS2-201ENST00000325438 EFCAB2Q5VUJ9 269 aa29.63■■■□□ 2.33
PACS2-201ENST00000325438 AAMPQ13685 434 aa29.62■■■□□ 2.33
PACS2-201ENST00000325438 CHD1LQ86WJ1 897 aa29.62■■■□□ 2.33
PACS2-201ENST00000325438 NINLQ9Y2I6 1382 aa29.62■■■□□ 2.33
PACS2-201ENST00000325438 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
PACS2-201ENST00000325438 GGT6Q6P531 493 aa29.61■■■□□ 2.33
PACS2-201ENST00000325438 CASC1Q6TDU7 716 aa29.59■■■□□ 2.33
PACS2-201ENST00000325438 UQCRHLA0A096LP55 91 aa29.58■■■□□ 2.33
PACS2-201ENST00000325438 UQCRHP07919 91 aa29.58■■■□□ 2.33
PACS2-201ENST00000325438 CABP2Q9NPB3 220 aa29.58■■■□□ 2.33
PACS2-201ENST00000325438 PDCL3Q9H2J4 239 aa29.58■■■□□ 2.33
PACS2-201ENST00000325438 PTPRGP23470 1445 aa29.57■■■□□ 2.32
PACS2-201ENST00000325438 FAM135AQ9P2D6 1515 aa29.57■■■□□ 2.32
PACS2-201ENST00000325438 RBM27Q9P2N5 1060 aaKnown RBP29.57■■■□□ 2.32
PACS2-201ENST00000325438 ISY1Q9ULR0 285 aaKnown RBP29.56■■■□□ 2.32
PACS2-201ENST00000325438 NSD3Q9BZ95 1437 aa29.56■■■□□ 2.32
PACS2-201ENST00000325438 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
PACS2-201ENST00000325438 GAS2L2Q8NHY3 880 aa29.55■■■□□ 2.32
PACS2-201ENST00000325438 THUMPD2Q9BTF0 503 aaKnown RBP29.54■■■□□ 2.32
PACS2-201ENST00000325438 ADGRF5Q8IZF2 1346 aa29.53■■■□□ 2.32
PACS2-201ENST00000325438 ASXL1Q8IXJ9 1541 aa29.53■■■□□ 2.32
PACS2-201ENST00000325438 HMOX1P09601 288 aa29.53■■■□□ 2.32
PACS2-201ENST00000325438 POLR1AO95602 1720 aaPredicted RBP29.53■■■□□ 2.32
PACS2-201ENST00000325438 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.53■■■□□ 2.32
PACS2-201ENST00000325438 RAPGEF6Q8TEU7 1601 aa29.52■■■□□ 2.32
PACS2-201ENST00000325438 BAG4O95429 457 aaKnown RBP29.52■■■□□ 2.32
PACS2-201ENST00000325438 CIZ1Q9ULV3 898 aaPredicted RBP29.52■■■□□ 2.32
PACS2-201ENST00000325438 KANK1Q14678 1352 aa29.51■■■□□ 2.32
PACS2-201ENST00000325438 GPRASP1Q5JY77 1395 aa29.5■■■□□ 2.31
PACS2-201ENST00000325438 TBC1D9Q6ZT07 1266 aa29.5■■■□□ 2.31
PACS2-201ENST00000325438 BCL11BQ9C0K0 894 aaPredicted RBP29.49■■■□□ 2.31
PACS2-201ENST00000325438 ADGRL2O95490 1459 aa29.49■■■□□ 2.31
PACS2-201ENST00000325438 SYCE3A1L190 88 aa29.49■■■□□ 2.31
PACS2-201ENST00000325438 ST18O60284 1047 aa29.49■■■□□ 2.31
PACS2-201ENST00000325438 CD2BP2O95400 341 aaKnown RBP29.49■■■□□ 2.31
PACS2-201ENST00000325438 CCDC141Q6ZP82 1450 aa29.48■■■□□ 2.31
PACS2-201ENST00000325438 DISP1Q96F81 1524 aa29.48■■■□□ 2.31
PACS2-201ENST00000325438 ARHGAP5Q13017 1502 aa29.48■■■□□ 2.31
PACS2-201ENST00000325438 TMPOP42166 694 aaKnown RBP29.47■■■□□ 2.31
PACS2-201ENST00000325438 PIK3C2GO75747 1445 aa29.47■■■□□ 2.31
PACS2-201ENST00000325438 RAB3GAP1Q15042 981 aa29.47■■■□□ 2.31
PACS2-201ENST00000325438 KIF16BQ96L93 1317 aa29.47■■■□□ 2.31
PACS2-201ENST00000325438 CDC45O75419 566 aa29.46■■■□□ 2.31
PACS2-201ENST00000325438 NUCB2P80303 420 aa29.46■■■□□ 2.31
PACS2-201ENST00000325438 CHAMP1Q96JM3 812 aa29.46■■■□□ 2.31
PACS2-201ENST00000325438 KIAA2012Q0VF49 1180 aa29.46■■■□□ 2.31
PACS2-201ENST00000325438 ZHX1Q9UKY1 873 aaPredicted RBP29.45■■■□□ 2.31
PACS2-201ENST00000325438 INSRP06213 1382 aa29.45■■■□□ 2.31
PACS2-201ENST00000325438 CHMP4BQ9H444 224 aaKnown RBP29.44■■■□□ 2.3
PACS2-201ENST00000325438 SOX12O15370 315 aa29.43■■■□□ 2.3
PACS2-201ENST00000325438 STAG3Q9UJ98 1225 aa29.42■■■□□ 2.3
PACS2-201ENST00000325438 SMC5Q8IY18 1101 aa29.42■■■□□ 2.3
PACS2-201ENST00000325438 SLC4A10Q6U841 1118 aa29.42■■■□□ 2.3
PACS2-201ENST00000325438 WDR7Q9Y4E6 1490 aa29.41■■■□□ 2.3
PACS2-201ENST00000325438 SCAF11Q99590 1463 aaKnown RBP29.41■■■□□ 2.3
PACS2-201ENST00000325438 MINK1Q8N4C8 1332 aaPredicted RBP29.41■■■□□ 2.3
PACS2-201ENST00000325438 FBLN1P23142 703 aa29.41■■■□□ 2.3
PACS2-201ENST00000325438 PRIM1P49642 420 aaKnown RBP29.41■■■□□ 2.3
PACS2-201ENST00000325438 HDAC1Q13547 482 aaPredicted RBP29.41■■■□□ 2.3
PACS2-201ENST00000325438 DIAPH1O60610 1272 aaKnown RBP29.4■■■□□ 2.3
PACS2-201ENST00000325438 ERCC6Q03468 1493 aa29.39■■■□□ 2.3
PACS2-201ENST00000325438 ZSCAN23Q3MJ62 389 aa29.39■■■□□ 2.3
PACS2-201ENST00000325438 KLHL40Q2TBA0 621 aa29.39■■■□□ 2.3
PACS2-201ENST00000325438 NUCB1Q02818 461 aa29.38■■■□□ 2.29
PACS2-201ENST00000325438 KIAA0556O60303 1618 aa29.38■■■□□ 2.29
PACS2-201ENST00000325438 TRIM6-TRIM34B2RNG4 842 aa29.37■■■□□ 2.29
PACS2-201ENST00000325438 ATP10BO94823 1461 aa29.37■■■□□ 2.29
PACS2-201ENST00000325438 OFD1O75665 1012 aa29.37■■■□□ 2.29
PACS2-201ENST00000325438 PRKAR2BP31323 418 aa29.36■■■□□ 2.29
PACS2-201ENST00000325438 NEK4P51957 841 aa29.36■■■□□ 2.29
PACS2-201ENST00000325438 RBSNQ9H1K0 784 aa29.36■■■□□ 2.29
PACS2-201ENST00000325438 SNX21Q969T3 373 aa29.35■■■□□ 2.29
PACS2-201ENST00000325438 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
PACS2-201ENST00000325438 PKP1Q13835 747 aa29.35■■■□□ 2.29
PACS2-201ENST00000325438 GDPD2Q9HCC8 539 aa29.34■■■□□ 2.29
PACS2-201ENST00000325438 PLA2R1Q13018 1463 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms