RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 API5Q9BZZ5 524 aaKnown RBP6.86□□□□□ -1.31
VCAN-201ENST00000265077 CLSTN1O94985 981 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 MCM4P33991 863 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 C22orf23Q9BZE7 217 aa6.86□□□□□ -1.31
VCAN-201ENST00000265077 RRAGDQ9NQL2 400 aaPredicted RBP6.86□□□□□ -1.31
VCAN-201ENST00000265077 INTS3Q68E01 1043 aaKnown RBP6.85□□□□□ -1.31
VCAN-201ENST00000265077 RNF20Q5VTR2 975 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 RASSF8Q8NHQ8 419 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 SCAPERQ9BY12 1400 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 RBM25P49756 843 aaKnown RBP6.85□□□□□ -1.31
VCAN-201ENST00000265077 TERF1P54274 439 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 CCDC91Q7Z6B0 441 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 CCDC112Q8NEF3 446 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 FGD6Q6ZV73 1430 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 UTP14CQ5TAP6 766 aaKnown RBP6.85□□□□□ -1.31
VCAN-201ENST00000265077 ANKRD20A12PQ8NF67 263 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 XPCQ01831 940 aaPredicted RBP6.85□□□□□ -1.31
VCAN-201ENST00000265077 SLC4A10Q6U841 1118 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 PRIMPOLQ96LW4 560 aa6.85□□□□□ -1.31
VCAN-201ENST00000265077 EFCAB5A4FU69 1503 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 GGT6Q6P531 493 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 CCDC191Q8NCU4 936 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 OFD1O75665 1012 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 IPO7O95373 1038 aaKnown RBP6.84□□□□□ -1.31
VCAN-201ENST00000265077 SOX12O15370 315 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 DMTNQ08495 405 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 CPLX2Q6PUV4 134 aaKnown RBP6.84□□□□□ -1.31
VCAN-201ENST00000265077 DZIP1LQ8IYY4 767 aaKnown RBP6.84□□□□□ -1.31
VCAN-201ENST00000265077 MYCBPQ99417 103 aaPredicted RBP6.84□□□□□ -1.31
VCAN-201ENST00000265077 LRRC9Q6ZRR7 1453 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 FYCO1Q9BQS8 1478 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 MCM2P49736 904 aa6.84□□□□□ -1.31
VCAN-201ENST00000265077 TPD52L1Q16890 204 aaPredicted RBP6.84□□□□□ -1.31
VCAN-201ENST00000265077 SARNPP82979 210 aaKnown RBP6.84□□□□□ -1.32
VCAN-201ENST00000265077 CCAR2Q8N163 923 aaKnown RBP6.84□□□□□ -1.32
VCAN-201ENST00000265077 PES1O00541 588 aaKnown RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 PLIN1O60240 522 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 AKAP17AQ02040 695 aaKnown RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 CT47A1Q5JQC4 288 aaPredicted RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 CADPSQ9ULU8 1353 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 GOLIM4O00461 696 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 RILPL2Q969X0 211 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 MRVI1Q9Y6F6 885 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 KIF7Q2M1P5 1343 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 CAVIN1Q6NZI2 390 aaKnown RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 COG6Q9Y2V7 657 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 SLC26A8Q96RN1 970 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 CHMP3Q9Y3E7 222 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 FAM107BQ9H098 131 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 KRT222Q8N1A0 295 aa6.83□□□□□ -1.32
VCAN-201ENST00000265077 NAT10Q9H0A0 1025 aaKnown RBP6.83□□□□□ -1.32
VCAN-201ENST00000265077 NOL8Q76FK4 1167 aaKnown RBP6.82□□□□□ -1.32
VCAN-201ENST00000265077 TXLNBQ8N3L3 684 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 CASKIN1Q8WXD9 1431 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 CCP110O43303 1012 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 RUNDC1Q96C34 613 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 SPDYE4A6NLX3 237 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 FOXD4L5Q5VV16 416 aaPredicted RBP6.82□□□□□ -1.32
VCAN-201ENST00000265077 FOXD4L4Q8WXT5 416 aaPredicted RBP6.82□□□□□ -1.32
VCAN-201ENST00000265077 RASSF4Q9H2L5 321 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 XRCC6P12956 609 aaKnown RBP eCLIP6.82□□□□□ -1.32
VCAN-201ENST00000265077 CEP89Q96ST8 783 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 RRP7AQ9Y3A4 280 aaKnown RBP6.82□□□□□ -1.32
VCAN-201ENST00000265077 CDR1P51861 262 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
VCAN-201ENST00000265077 MCTP1Q6DN14 999 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 TOMM22Q9NS69 142 aa6.82□□□□□ -1.32
VCAN-201ENST00000265077 RUSC2Q8N2Y8 1516 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 GTF2F1P35269 517 aaKnown RBP eCLIP6.81□□□□□ -1.32
VCAN-201ENST00000265077 CCDC73Q6ZRK6 1079 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 DYDC1Q8WWB3 177 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 EHBP1L1Q8N3D4 1523 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 SETSIPP0DME0 302 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 CREBRFQ8IUR6 639 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 COG3Q96JB2 828 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 RABEP1Q15276 862 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 HOMER1Q86YM7 354 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 SMG6Q86US8 1419 aaKnown RBP6.81□□□□□ -1.32
VCAN-201ENST00000265077 ATAD2BQ9ULI0 1458 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 WDR97A6NE52 1622 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 CDC45O75419 566 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 KIAA0754O94854 1291 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 DDX11Q96FC9 970 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 PDE3AQ14432 1141 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 SYNE3Q6ZMZ3 975 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 TSPY26PQ9H489 355 aa6.81□□□□□ -1.32
VCAN-201ENST00000265077 HECW1Q76N89 1606 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 NOL10Q9BSC4 688 aaKnown RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 BCL2L13Q9BXK5 485 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 TDRD9Q8NDG6 1382 aaKnown RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 EID1Q9Y6B2 187 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 VGFO15240 615 aaPredicted RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 MNAT1P51948 309 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 FEZ1Q99689 392 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 MPHOSPH10O00566 681 aaKnown RBP6.8□□□□□ -1.32
VCAN-201ENST00000265077 AMPHP49418 695 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 RNF214Q8ND24 703 aa6.8□□□□□ -1.32
VCAN-201ENST00000265077 PDCP20941 246 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms