RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Fam177a1Q8BR63 207 aa13.75□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Mindy4Q3UQI9 744 aa13.75□□□□□ -0.21
Srp54b-202ENSMUST00000218879 AatfQ9JKX4 526 aaKnown RBP13.75□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Tbc1d4Q8BYJ6 1307 aa13.74□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Kiaa0556Q8C753 1610 aa13.74□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Cdkn1cP49919 348 aa13.74□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Ak7Q9D2H2 614 aa13.74□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Vsig10D3YX43 558 aa13.74□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Plekhh1Q80TI1 1356 aa13.74□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Ddit3P35639 168 aa13.73□□□□□ -0.21
Srp54b-202ENSMUST00000218879 SlkO54988 1233 aa13.72□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Pank3Q8R2W9 370 aa13.72□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Irx4Q9QY61 515 aa13.72□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Rad21Q61550 635 aaKnown RBP13.72□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Q9CYI0 393 aa13.72□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Ythdc2B2RR83 1445 aaKnown RBP13.71□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Spryd3E9Q9B3 442 aa13.71□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Cep83Q9D5R3 692 aa13.71□□□□□ -0.21
Srp54b-202ENSMUST00000218879 Gtf2e1Q9D0D5 440 aa13.71□□□□□ -0.22
Srp54b-202ENSMUST00000218879 AglF8VPN4 1532 aa13.71□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Ccdc183A2AJB1 534 aa13.7□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Lrriq3Q14DL3 633 aa13.7□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Ncbp1Q3UYV9 790 aaKnown RBP13.7□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Chmp5Q9D7S9 219 aa13.7□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Chic2Q9D9G3 165 aa13.7□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Sf3a1Q8K4Z5 791 aaKnown RBP13.7□□□□□ -0.22
Srp54b-202ENSMUST00000218879 PxdnQ3UQ28 1475 aa13.69□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Vps8Q0P5W1 1427 aa13.69□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Wwc2Q6NXJ0 1187 aa13.69□□□□□ -0.22
Srp54b-202ENSMUST00000218879 PtmaP26350 111 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Klra5Q60652 266 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Pcdhgc5Q91XW9 944 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Irx5Q9JKQ4 484 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 AdnpQ9Z103 1108 aaKnown RBP13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 BlmO88700 1416 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Tiam1Q60610 1591 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Gm6268A2A3U9 297 aa13.68□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Soga1E1U8D0 1418 aa13.67□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Hspa5P20029 655 aaKnown RBP13.67□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Ulbp1Q8HWA3 334 aa13.67□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Wdr7Q920I9 1489 aa13.67□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Bsdc1Q80Y55 427 aa13.66□□□□□ -0.22
Srp54b-202ENSMUST00000218879 CtifQ6PEE2 600 aaKnown RBP13.66□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Phf20l1Q8CCJ9 1013 aa13.66□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Swt1Q9DBQ9 907 aa13.66□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Zfp597E9Q6S0 419 aa13.65□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Gcc2Q8CHG3 1679 aa13.65□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Arap1Q4LDD4 1452 aa13.65□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Spout1Q3UHX9 385 aaKnown RBP13.65□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Iqca1Q9CUL5 857 aa13.65□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Ttc21aQ8C0S4 1314 aa13.65□□□□□ -0.22
Srp54b-202ENSMUST00000218879 Arglu1Q3UL36 271 aaKnown RBP13.64□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Tbc1d32Q3URV1 1296 aa13.64□□□□□ -0.23
Srp54b-202ENSMUST00000218879 B4galnt3Q6L8S8 986 aa13.64□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Rad50P70388 1312 aa13.64□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Mkrn3Q60764 544 aa13.63□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Myom3A2ABU4 1439 aa13.63□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Ncapd2Q8K2Z4 1392 aa13.63□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Kif2aP28740 705 aa13.63□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Ddx46Q569Z5 1032 aaKnown RBP13.63□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Ccdc34Q3UI66 367 aa13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Tmx3Q8BXZ1 456 aa13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Ddx41Q91VN6 622 aaKnown RBP13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Lrrc9Q8CDN9 1456 aa13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Anapc15-psA0A140T8L6 141 aa13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Zkscan3Q91VW9 553 aa13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Zfyve16Q80U44 1528 aa13.62□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Map2k1P31938 393 aa13.61□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Anp32cQ64G17 123 aa13.61□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Erich6bQ9D4S6 220 aa13.61□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Cep120Q7TSG1 988 aa13.6□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Terf2O35144 541 aa13.6□□□□□ -0.23
Srp54b-202ENSMUST00000218879 MycbpQ9EQS3 103 aa13.6□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Abca8bQ8K440 1620 aa13.6□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Sf3b2Q3UJB0 878 aaKnown RBP13.59□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Il16O54824 1322 aa13.59□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Tnpo1Q8BFY9 898 aaKnown RBP13.59□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Klra1P20937 262 aa13.59□□□□□ -0.23
Srp54b-202ENSMUST00000218879 AknaQ80VW7 1404 aa13.59□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Catsper2A2ARP9 588 aa13.58□□□□□ -0.23
Srp54b-202ENSMUST00000218879 Prr29B1ARI9 187 aa13.58□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Irx2P81066 474 aa13.58□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Ccar1Q8CH18 1146 aaKnown RBP13.57□□□□□ -0.24
Srp54b-202ENSMUST00000218879 U2af2P26369 475 aaKnown RBP13.57□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Pank2Q3U4S0 443 aa13.57□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Ptgs1P22437 602 aa13.57□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Zfp444Q3TDV8 331 aaKnown RBP13.57□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Dmrt2Q8BG36 561 aa13.57□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Gm6588E9Q3K0 461 aa13.56□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Trim66Q924W6 1242 aa13.56□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Klhl33G3UW92 533 aa13.56□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Zkscan4Q5SZT6 480 aa13.56□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Klra4Q60651 263 aa13.56□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Zkscan5Q9Z1D8 819 aa13.55□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Rassf4Q8CB96 322 aa13.54□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Nol10Q5RJG1 687 aaKnown RBP13.54□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Klra3Q64329 266 aa13.54□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Erich3F6QRE9 1637 aa13.54□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Traf1P39428 409 aa13.54□□□□□ -0.24
Srp54b-202ENSMUST00000218879 Kdm4aQ8BW72 1064 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms