RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Gm35339A0A140LHH9 1649 aa20.01■□□□□ 0.79
Srp54b-202ENSMUST00000218879 Rpgrip1Q9EPQ2 1331 aa19.65■□□□□ 0.74
Srp54b-202ENSMUST00000218879 Myt1Q8CFC2 1127 aa18.81■□□□□ 0.6
Srp54b-202ENSMUST00000218879 NischQ80TM9 1593 aa18.78■□□□□ 0.6
Srp54b-202ENSMUST00000218879 Pcgf6Q99NA9 353 aa18.77■□□□□ 0.6
Srp54b-202ENSMUST00000218879 Abcc8B2RUS7 1588 aa18.43■□□□□ 0.54
Srp54b-202ENSMUST00000218879 Abcc9P70170 1546 aa18.43■□□□□ 0.54
Srp54b-202ENSMUST00000218879 DiexfQ8BTT6 772 aaKnown RBP18.31■□□□□ 0.52
Srp54b-202ENSMUST00000218879 Acin1Q9JIX8 1338 aaKnown RBP18.31■□□□□ 0.52
Srp54b-202ENSMUST00000218879 Las1lA2BE28 776 aaKnown RBP18.22■□□□□ 0.51
Srp54b-202ENSMUST00000218879 CenpbP27790 599 aa18.21■□□□□ 0.51
Srp54b-202ENSMUST00000218879 Rtl1Q7M732 1744 aa18.1■□□□□ 0.49
Srp54b-202ENSMUST00000218879 ScribQ80U72 1612 aa18.04■□□□□ 0.48
Srp54b-202ENSMUST00000218879 Bcl11aQ9QYE3 773 aa17.87■□□□□ 0.45
Srp54b-202ENSMUST00000218879 Ccdc180J3QNE4 1664 aa17.83■□□□□ 0.45
Srp54b-202ENSMUST00000218879 Trim41Q5NCC3 630 aa17.8■□□□□ 0.44
Srp54b-202ENSMUST00000218879 Neurod1Q60867 357 aa17.75■□□□□ 0.43
Srp54b-202ENSMUST00000218879 1700123L14RikQ3V2K7 440 aa17.7■□□□□ 0.42
Srp54b-202ENSMUST00000218879 Amer1Q7TS75 1132 aa17.5■□□□□ 0.39
Srp54b-202ENSMUST00000218879 Aplp2Q06335 707 aa17.45■□□□□ 0.38
Srp54b-202ENSMUST00000218879 Dcaf1Q80TR8 1506 aa17.44■□□□□ 0.38
Srp54b-202ENSMUST00000218879 Anks4bQ8K3X6 423 aa17.38■□□□□ 0.37
Srp54b-202ENSMUST00000218879 Rhox8Q6VSS7 320 aa17.36■□□□□ 0.37
Srp54b-202ENSMUST00000218879 Supt5hO55201 1082 aaKnown RBP17.31■□□□□ 0.36
Srp54b-202ENSMUST00000218879 NacadQ5SWP3 1504 aa17.27■□□□□ 0.35
Srp54b-202ENSMUST00000218879 PrkcshO08795 521 aa17.25■□□□□ 0.35
Srp54b-202ENSMUST00000218879 Kdm5dQ62240 1548 aa17.17■□□□□ 0.34
Srp54b-202ENSMUST00000218879 CatipB9EKE5 520 aa17.12■□□□□ 0.33
Srp54b-202ENSMUST00000218879 Ehmt2Q9Z148 1263 aaKnown RBP17.12■□□□□ 0.33
Srp54b-202ENSMUST00000218879 Csrnp3P59055 597 aa17.09■□□□□ 0.33
Srp54b-202ENSMUST00000218879 Cngb1E1AZ71 1325 aa17.07■□□□□ 0.32
Srp54b-202ENSMUST00000218879 Sycp2Q9CUU3 1500 aa16.99■□□□□ 0.31
Srp54b-202ENSMUST00000218879 BicraF8VPZ9 1578 aa16.85■□□□□ 0.29
Srp54b-202ENSMUST00000218879 Fgd1P52734 960 aa16.76■□□□□ 0.27
Srp54b-202ENSMUST00000218879 NrdcQ8BHG1 1161 aa16.73■□□□□ 0.27
Srp54b-202ENSMUST00000218879 Zcchc6Q5BLK4 1491 aaKnown RBP16.71■□□□□ 0.27
Srp54b-202ENSMUST00000218879 Pknox2Q8BG99 474 aa16.64■□□□□ 0.25
Srp54b-202ENSMUST00000218879 Rtl5Q5DTT4 599 aa16.61■□□□□ 0.25
Srp54b-202ENSMUST00000218879 Ifnlr1Q8CGK5 535 aa16.59■□□□□ 0.25
Srp54b-202ENSMUST00000218879 Thoc2B1AZI6 1594 aaKnown RBP16.56■□□□□ 0.24
Srp54b-202ENSMUST00000218879 Crybg2B7ZCC2 1516 aa16.55■□□□□ 0.24
Srp54b-202ENSMUST00000218879 HrcG5E8J6 738 aa16.51■□□□□ 0.23
Srp54b-202ENSMUST00000218879 Hdac5Q9Z2V6 1113 aa16.49■□□□□ 0.23
Srp54b-202ENSMUST00000218879 Fam71e1A1L3C1 212 aa16.49■□□□□ 0.23
Srp54b-202ENSMUST00000218879 Dnajc5bQ9CQ94 199 aa16.47■□□□□ 0.23
Srp54b-202ENSMUST00000218879 Sall2Q9QX96 1004 aa16.43■□□□□ 0.22
Srp54b-202ENSMUST00000218879 Rb1cc1Q9ESK9 1588 aa16.35■□□□□ 0.21
Srp54b-202ENSMUST00000218879 NefmP08553 848 aa16.34■□□□□ 0.21
Srp54b-202ENSMUST00000218879 Cdk11bP24788 784 aaKnown RBP16.33■□□□□ 0.2
Srp54b-202ENSMUST00000218879 Baz1bQ9Z277 1479 aa16.31■□□□□ 0.2
Srp54b-202ENSMUST00000218879 BccipQ9CWI3 316 aa16.31■□□□□ 0.2
Srp54b-202ENSMUST00000218879 Gtf3c5Q8R2T8 520 aa16.25■□□□□ 0.19
Srp54b-202ENSMUST00000218879 Baz1aO88379 1555 aa16.24■□□□□ 0.19
Srp54b-202ENSMUST00000218879 Ccdc9Q8VC31 543 aaKnown RBP16.23■□□□□ 0.19
Srp54b-202ENSMUST00000218879 Pds5bQ4VA53 1446 aaKnown RBP16.2■□□□□ 0.18
Srp54b-202ENSMUST00000218879 Nop58Q6DFW4 536 aaKnown RBP16.15■□□□□ 0.18
Srp54b-202ENSMUST00000218879 Gtf3c3Q3TMP1 882 aa16.15■□□□□ 0.18
Srp54b-202ENSMUST00000218879 Plppr3Q7TPB0 716 aa16.14■□□□□ 0.17
Srp54b-202ENSMUST00000218879 Zeb1Q64318 1117 aa16.09■□□□□ 0.17
Srp54b-202ENSMUST00000218879 Fam135aQ6NS59 1506 aa16.09■□□□□ 0.17
Srp54b-202ENSMUST00000218879 Tnnt3Q9QZ47 272 aa16.08■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Smarca2Q6DIC0 1577 aa16.08■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Pelp1Q9DBD5 1123 aaKnown RBP16.07■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Ccdc136Q3TVA9 1136 aa16.05■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Gm38655A0A286YDK6 273 aa16.05■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Atad2bE9Q166 1460 aaKnown RBP16.05■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Ipo4Q8VI75 1082 aa16.04■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Anp32aO35381 247 aa16.02■□□□□ 0.16
Srp54b-202ENSMUST00000218879 Znf316Q6PGE4 1016 aa15.99■□□□□ 0.15
Srp54b-202ENSMUST00000218879 Upf2A2AT37 1269 aaKnown RBP15.97■□□□□ 0.15
Srp54b-202ENSMUST00000218879 ClspnQ80YR7 1315 aa15.97■□□□□ 0.15
Srp54b-202ENSMUST00000218879 Scaf1Q5U4C3 1256 aaKnown RBP15.95■□□□□ 0.14
Srp54b-202ENSMUST00000218879 Plcd4Q8K3R3 807 aa15.94■□□□□ 0.14
Srp54b-202ENSMUST00000218879 Irx3P81067 507 aa15.93■□□□□ 0.14
Srp54b-202ENSMUST00000218879 Smarca4Q3TKT4 1613 aaKnown RBP15.9■□□□□ 0.14
Srp54b-202ENSMUST00000218879 Cc2d2aQ8CFW7 1633 aa15.89■□□□□ 0.13
Srp54b-202ENSMUST00000218879 Ttbk1Q6PCN3 1308 aa15.88■□□□□ 0.13
Srp54b-202ENSMUST00000218879 TimelessQ9R1X4 1197 aa15.86■□□□□ 0.13
Srp54b-202ENSMUST00000218879 Aebp2Q9Z248 504 aaKnown RBP15.82■□□□□ 0.12
Srp54b-202ENSMUST00000218879 Wdr62Q3U3T8 1523 aa15.8■□□□□ 0.12
Srp54b-202ENSMUST00000218879 Unc13aQ4KUS2 1712 aa15.8■□□□□ 0.12
Srp54b-202ENSMUST00000218879 Kcnn1Q9EQR3 537 aa15.8■□□□□ 0.12
Srp54b-202ENSMUST00000218879 Iqgap2Q3UQ44 1575 aa15.79■□□□□ 0.12
Srp54b-202ENSMUST00000218879 Mapk8ip2Q9ERE9 830 aa15.79■□□□□ 0.12
Srp54b-202ENSMUST00000218879 Ccdc27Q3V036 639 aa15.75■□□□□ 0.11
Srp54b-202ENSMUST00000218879 SafbD3YXK2 937 aaKnown RBP15.74■□□□□ 0.11
Srp54b-202ENSMUST00000218879 Hnrnpul2Q00PI9 745 aaKnown RBP15.74■□□□□ 0.11
Srp54b-202ENSMUST00000218879 Zfp777B9EKF4 885 aa15.71■□□□□ 0.11
Srp54b-202ENSMUST00000218879 Ercc6F8VPZ5 1481 aa15.71■□□□□ 0.1
Srp54b-202ENSMUST00000218879 Il27Q8K3I6 234 aa15.69■□□□□ 0.1
Srp54b-202ENSMUST00000218879 AampJ3QN89 436 aa15.68■□□□□ 0.1
Srp54b-202ENSMUST00000218879 Ppargc1bQ8VHJ7 1014 aa15.65■□□□□ 0.1
Srp54b-202ENSMUST00000218879 Myt1lP97500 1187 aa15.61■□□□□ 0.09
Srp54b-202ENSMUST00000218879 Frmpd1A2AKB4 1549 aa15.6■□□□□ 0.09
Srp54b-202ENSMUST00000218879 Supt16hQ920B9 1047 aa15.6■□□□□ 0.09
Srp54b-202ENSMUST00000218879 Mier1Q5UAK0 511 aa15.59■□□□□ 0.09
Srp54b-202ENSMUST00000218879 Pdcl3Q8BVF2 240 aa15.59■□□□□ 0.09
Srp54b-202ENSMUST00000218879 Nolc1E9Q5C9 702 aaKnown RBP15.58■□□□□ 0.08
Srp54b-202ENSMUST00000218879 Cep164Q5DU05 1446 aa15.57■□□□□ 0.08
Srp54b-202ENSMUST00000218879 NeflP08551 543 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 93.7 ms