Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Gm25239-201ENSMUST00000174915 86 ntBASIC42.26■■■■■ 4.36
Q9CYI0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
Q9CYI0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
Q9CYI0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Q9CYI0 Gm15042-201ENSMUST00000120212 883 ntBASIC36.9■■■■□ 3.5
Q9CYI0 Gm24109-201ENSMUST00000175489 103 ntBASIC36.62■■■■□ 3.45
Q9CYI0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Q9CYI0 Gm15045-201ENSMUST00000117359 883 ntBASIC36.08■■■■□ 3.37
Q9CYI0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.98■■■■□ 3.35
Q9CYI0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Q9CYI0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.7■■■■□ 3.31
Q9CYI0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Q9CYI0 Gm23366-201ENSMUST00000175022 89 ntBASIC35.32■■■■□ 3.24
Q9CYI0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Q9CYI0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Q9CYI0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Q9CYI0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.43■■■■□ 3.1
Q9CYI0 Psd-208ENSMUST00000224556 2034 ntBASIC34.36■■■■□ 3.09
Q9CYI0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Q9CYI0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.14■■■■□ 3.06
Q9CYI0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.14■■■■□ 3.06
Q9CYI0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.08■■■■□ 3.05
Q9CYI0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
Q9CYI0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Q9CYI0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.89■■■■□ 3.02
Q9CYI0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.78■■■■□ 3
Q9CYI0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Q9CYI0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.68■■■□□ 2.98
Q9CYI0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Q9CYI0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.66■■■□□ 2.98
Q9CYI0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Q9CYI0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Q9CYI0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Q9CYI0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Q9CYI0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.4■■■□□ 2.94
Q9CYI0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Q9CYI0 Gm25238-201ENSMUST00000174914 89 ntBASIC33.37■■■□□ 2.93
Q9CYI0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Q9CYI0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Q9CYI0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Q9CYI0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.18■■■□□ 2.9
Q9CYI0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Q9CYI0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
Q9CYI0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
Q9CYI0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Q9CYI0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.62■■■□□ 2.81
Q9CYI0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.56■■■□□ 2.8
Q9CYI0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Q9CYI0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Q9CYI0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Q9CYI0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Q9CYI0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Q9CYI0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.41■■■□□ 2.78
Q9CYI0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
Q9CYI0 Gm27325-201ENSMUST00000175467 74 ntBASIC32.37■■■□□ 2.77
Q9CYI0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Q9CYI0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Q9CYI0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.19■■■□□ 2.74
Q9CYI0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.18■■■□□ 2.74
Q9CYI0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Q9CYI0 Gm25262-201ENSMUST00000174934 133 ntBASIC32.01■■■□□ 2.71
Q9CYI0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Q9CYI0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.95■■■□□ 2.71
Q9CYI0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Q9CYI0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Q9CYI0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.86■■■□□ 2.69
Q9CYI0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Q9CYI0 Rab21-202ENSMUST00000218831 843 ntBASIC31.8■■■□□ 2.68
Q9CYI0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Q9CYI0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Q9CYI0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Q9CYI0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.71■■■□□ 2.67
Q9CYI0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.69■■■□□ 2.66
Q9CYI0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Q9CYI0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Q9CYI0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Q9CYI0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.55■■■□□ 2.64
Q9CYI0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Q9CYI0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Q9CYI0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.45■■■□□ 2.62
Q9CYI0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Q9CYI0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.41■■■□□ 2.62
Q9CYI0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Q9CYI0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Q9CYI0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.35■■■□□ 2.61
Q9CYI0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Q9CYI0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.32■■■□□ 2.6
Q9CYI0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Q9CYI0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Q9CYI0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.3■■■□□ 2.6
Q9CYI0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Q9CYI0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Q9CYI0 Gm26115-201ENSMUST00000175605 87 ntBASIC31.22■■■□□ 2.59
Q9CYI0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Q9CYI0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Q9CYI0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Q9CYI0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Q9CYI0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Q9CYI0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.01■■■□□ 2.55
Q9CYI0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms