RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 RereQ80TZ9 1558 aa18.22■□□□□ 0.51
Lime1-201ENSMUST00000048077 Kdm2bQ6P1G2 1309 aa18.22■□□□□ 0.51
Lime1-201ENSMUST00000048077 Hfm1D3Z4R1 1434 aa18.22■□□□□ 0.51
Lime1-201ENSMUST00000048077 Ralbp1Q62172 648 aa18.22■□□□□ 0.51
Lime1-201ENSMUST00000048077 Ccdc30Q8BVF4 654 aa18.21■□□□□ 0.5
Lime1-201ENSMUST00000048077 Speer4f1Q9D5Q6 258 aa18.21■□□□□ 0.5
Lime1-201ENSMUST00000048077 Kiaa1107Q80TK0 1369 aa18.2■□□□□ 0.5
Lime1-201ENSMUST00000048077 Ptch1Q61115 1434 aa18.2■□□□□ 0.5
Lime1-201ENSMUST00000048077 Map4k4P97820 1233 aaKnown RBP18.2■□□□□ 0.5
Lime1-201ENSMUST00000048077 Golga2Q921M4 999 aa18.2■□□□□ 0.5
Lime1-201ENSMUST00000048077 Lrrc7Q80TE7 1490 aa18.2■□□□□ 0.5
Lime1-201ENSMUST00000048077 Dip2cE9PWR4 1557 aa18.2■□□□□ 0.5
Lime1-201ENSMUST00000048077 Uspl1Q3ULM6 1089 aa18.19■□□□□ 0.5
Lime1-201ENSMUST00000048077 Ttll13A4Q9F6 804 aa18.18■□□□□ 0.5
Lime1-201ENSMUST00000048077 Ttc37F8VPK0 1563 aa18.18■□□□□ 0.5
Lime1-201ENSMUST00000048077 Knl1Q66JQ7 1612 aa18.17■□□□□ 0.5
Lime1-201ENSMUST00000048077 AU022751B1B0V2 589 aa18.17■□□□□ 0.5
Lime1-201ENSMUST00000048077 Ccdc27Q3V036 639 aa18.16■□□□□ 0.5
Lime1-201ENSMUST00000048077 Ncbp3Q8BZR9 615 aaKnown RBP18.15■□□□□ 0.5
Lime1-201ENSMUST00000048077 IbtkQ6ZPR6 1352 aaKnown RBP18.15■□□□□ 0.5
Lime1-201ENSMUST00000048077 Scaf11E9PZM7 1456 aaKnown RBP18.15■□□□□ 0.5
Lime1-201ENSMUST00000048077 IqubQ8CDK3 788 aa18.15■□□□□ 0.5
Lime1-201ENSMUST00000048077 CenpjQ569L8 1344 aa18.15■□□□□ 0.5
Lime1-201ENSMUST00000048077 Cul9Q80TT8 1865 aa18.14■□□□□ 0.49
Lime1-201ENSMUST00000048077 Adgrl1Q80TR1 1466 aa18.14■□□□□ 0.49
Lime1-201ENSMUST00000048077 AampJ3QN89 436 aa18.14■□□□□ 0.49
Lime1-201ENSMUST00000048077 Stag3O70576 1240 aa18.13■□□□□ 0.49
Lime1-201ENSMUST00000048077 Pabpn1Q8CCS6 302 aaKnown RBP18.13■□□□□ 0.49
Lime1-201ENSMUST00000048077 EspnQ9ET47 871 aa18.13■□□□□ 0.49
Lime1-201ENSMUST00000048077 Iqsec2Q5DU25 1478 aa18.13■□□□□ 0.49
Lime1-201ENSMUST00000048077 Med14A2ABV5 1459 aaKnown RBP18.12■□□□□ 0.49
Lime1-201ENSMUST00000048077 Mapk8ip3Q9ESN9 1337 aa18.11■□□□□ 0.49
Lime1-201ENSMUST00000048077 Nrxn1Q9CS84 1514 aa18.11■□□□□ 0.49
Lime1-201ENSMUST00000048077 Cald1E9QA15 768 aaKnown RBP18.1■□□□□ 0.49
Lime1-201ENSMUST00000048077 Smc5Q8CG46 1101 aaKnown RBP18.09■□□□□ 0.49
Lime1-201ENSMUST00000048077 GsdmaQ9EST1 446 aa18.09■□□□□ 0.49
Lime1-201ENSMUST00000048077 Arhgap23Q69ZH9 1483 aa18.07■□□□□ 0.48
Lime1-201ENSMUST00000048077 Hecw2Q6I6G8 1578 aa18.07■□□□□ 0.48
Lime1-201ENSMUST00000048077 Neurod2Q62414 383 aa18.07■□□□□ 0.48
Lime1-201ENSMUST00000048077 Znf521Q6KAS7 1311 aa18.05■□□□□ 0.48
Lime1-201ENSMUST00000048077 Cnga1P29974 684 aa18.05■□□□□ 0.48
Lime1-201ENSMUST00000048077 Chmp5Q9D7S9 219 aa18.05■□□□□ 0.48
Lime1-201ENSMUST00000048077 Ahdc1Q6PAL7 1594 aaKnown RBP18.05■□□□□ 0.48
Lime1-201ENSMUST00000048077 CltcQ68FD5 1675 aaKnown RBP18.04■□□□□ 0.48
Lime1-201ENSMUST00000048077 Gm156Q58A37 223 aa18.04■□□□□ 0.48
Lime1-201ENSMUST00000048077 Fam135bQ9DAI6 1403 aa18.03■□□□□ 0.48
Lime1-201ENSMUST00000048077 P2rx7Q9Z1M0 595 aa18.02■□□□□ 0.48
Lime1-201ENSMUST00000048077 Trim58Q5NCC9 485 aa18.02■□□□□ 0.47
Lime1-201ENSMUST00000048077 Rsph4aQ8BYM7 716 aa18.02■□□□□ 0.47
Lime1-201ENSMUST00000048077 Prrc2bQ7TPM1 1486 aaKnown RBP18.01■□□□□ 0.47
Lime1-201ENSMUST00000048077 Qser1A2BIE1 1698 aa18.01■□□□□ 0.47
Lime1-201ENSMUST00000048077 Synj2Q9D2G5 1434 aa18■□□□□ 0.47
Lime1-201ENSMUST00000048077 Yeats2Q3TUF7 1407 aa18■□□□□ 0.47
Lime1-201ENSMUST00000048077 Apbb1Q9QXJ1 710 aa17.99■□□□□ 0.47
Lime1-201ENSMUST00000048077 Nkx1-2P42580 305 aa17.99■□□□□ 0.47
Lime1-201ENSMUST00000048077 B4galnt3Q6L8S8 986 aa17.99■□□□□ 0.47
Lime1-201ENSMUST00000048077 Znf541Q0GGX2 1363 aa17.98■□□□□ 0.47
Lime1-201ENSMUST00000048077 NudcO35685 332 aaKnown RBP17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Tmc1Q8R4P5 757 aa17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Ccdc9Q8VC31 543 aaKnown RBP17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Ciz1Q8VEH2 845 aa17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 PtprmP28828 1452 aa17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Iqcf3Q9D498 203 aa17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Bcl11aQ9QYE3 773 aa17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Arhgef28P97433 1693 aa17.97■□□□□ 0.47
Lime1-201ENSMUST00000048077 Exosc9Q9JHI7 438 aaKnown RBP17.96■□□□□ 0.47
Lime1-201ENSMUST00000048077 Plekhg1F6S200 1446 aa17.96■□□□□ 0.47
Lime1-201ENSMUST00000048077 Gas2l2Q5SSG4 860 aa17.94■□□□□ 0.46
Lime1-201ENSMUST00000048077 Ppm1gQ61074 542 aa17.93■□□□□ 0.46
Lime1-201ENSMUST00000048077 Tsen2Q6P7W5 460 aa17.93■□□□□ 0.46
Lime1-201ENSMUST00000048077 ChgaP26339 463 aaKnown RBP17.93■□□□□ 0.46
Lime1-201ENSMUST00000048077 Tspyl2Q7TQI8 677 aa17.93■□□□□ 0.46
Lime1-201ENSMUST00000048077 Prdm10Q3UTQ7 1184 aa17.92■□□□□ 0.46
Lime1-201ENSMUST00000048077 Ccar1Q8CH18 1146 aaKnown RBP17.91■□□□□ 0.46
Lime1-201ENSMUST00000048077 Pank1Q8K4K6 548 aa17.91■□□□□ 0.46
Lime1-201ENSMUST00000048077 U2af1Q9D883 239 aaKnown RBP17.91■□□□□ 0.46
Lime1-201ENSMUST00000048077 Usp32F8VPZ3 1604 aa17.91■□□□□ 0.46
Lime1-201ENSMUST00000048077 Atxn3Q9CVD2 355 aa17.91■□□□□ 0.46
Lime1-201ENSMUST00000048077 Cep170bQ80U49 1574 aa17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 Kif13aQ9EQW7 1749 aa17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 Itsn1Q9Z0R4 1714 aa17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 Gsto1O09131 240 aa17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 Shq1Q7TMX5 569 aa17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 Dbr1Q923B1 550 aa17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 CanxP35564 591 aaKnown RBP17.9■□□□□ 0.46
Lime1-201ENSMUST00000048077 Uhrf1bp1B2KF50 1429 aa17.89■□□□□ 0.46
Lime1-201ENSMUST00000048077 NktrP30415 1453 aa17.89■□□□□ 0.45
Lime1-201ENSMUST00000048077 PplQ9R269 1755 aa17.89■□□□□ 0.45
Lime1-201ENSMUST00000048077 Dnai1Q8C0M8 701 aa17.88■□□□□ 0.45
Lime1-201ENSMUST00000048077 Stk26Q99JT2 416 aa17.88■□□□□ 0.45
Lime1-201ENSMUST00000048077 Abca14E9Q8F8 1683 aa17.88■□□□□ 0.45
Lime1-201ENSMUST00000048077 Hsp90aa1P07901 733 aaKnown RBP17.88■□□□□ 0.45
Lime1-201ENSMUST00000048077 PaskQ8CEE6 1383 aa17.87■□□□□ 0.45
Lime1-201ENSMUST00000048077 FanciQ8K368 1330 aa17.87■□□□□ 0.45
Lime1-201ENSMUST00000048077 Naip7Q9JIB3 1402 aa17.87■□□□□ 0.45
Lime1-201ENSMUST00000048077 Duxf3A0A0N4SV92 674 aa17.87■□□□□ 0.45
Lime1-201ENSMUST00000048077 Apaf1O88879 1249 aa17.87■□□□□ 0.45
Lime1-201ENSMUST00000048077 Zc3h13E9Q784 1729 aaKnown RBP17.86■□□□□ 0.45
Lime1-201ENSMUST00000048077 Ksr2Q3UVC0 959 aa17.86■□□□□ 0.45
Lime1-201ENSMUST00000048077 Ipo8Q7TMY7 1010 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms