RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Shq1Q7TMX5 569 aa12.03□□□□□ -0.48
Trim42-201ENSMUST00000035026 Sipa1l1Q8C0T5 1782 aa12.03□□□□□ -0.48
Trim42-201ENSMUST00000035026 Mug2P28666 1451 aa12.03□□□□□ -0.48
Trim42-201ENSMUST00000035026 Q9D9H8 365 aa12.03□□□□□ -0.48
Trim42-201ENSMUST00000035026 Grwd1Q810D6 446 aaKnown RBP12.02□□□□□ -0.48
Trim42-201ENSMUST00000035026 Slc52a2Q9D8F3 450 aa12.02□□□□□ -0.48
Trim42-201ENSMUST00000035026 Pik3r4Q8VD65 1358 aa12.02□□□□□ -0.48
Trim42-201ENSMUST00000035026 Atp1b4Q99ME6 356 aa12.02□□□□□ -0.49
Trim42-201ENSMUST00000035026 Lrrc7Q80TE7 1490 aa12.01□□□□□ -0.49
Trim42-201ENSMUST00000035026 Cps1Q8C196 1500 aa12□□□□□ -0.49
Trim42-201ENSMUST00000035026 TonslQ6NZL6 1363 aa11.99□□□□□ -0.49
Trim42-201ENSMUST00000035026 Kdm2aP59997 1161 aa11.99□□□□□ -0.49
Trim42-201ENSMUST00000035026 Irx3P81067 507 aa11.99□□□□□ -0.49
Trim42-201ENSMUST00000035026 Ift172Q6VH22 1749 aa11.99□□□□□ -0.49
Trim42-201ENSMUST00000035026 Srpk2O54781 681 aaKnown RBP11.98□□□□□ -0.49
Trim42-201ENSMUST00000035026 Col18a1P39061 1774 aa11.98□□□□□ -0.49
Trim42-201ENSMUST00000035026 Puf60Q3UEB3 564 aaKnown RBP11.98□□□□□ -0.49
Trim42-201ENSMUST00000035026 Fan1Q69ZT1 1020 aa11.98□□□□□ -0.49
Trim42-201ENSMUST00000035026 Aebp2Q9Z248 504 aaKnown RBP11.98□□□□□ -0.49
Trim42-201ENSMUST00000035026 DnmbpQ6TXD4 1580 aa11.97□□□□□ -0.49
Trim42-201ENSMUST00000035026 Cep170bQ80U49 1574 aa11.96□□□□□ -0.49
Trim42-201ENSMUST00000035026 Unc13bQ9Z1N9 1602 aa11.96□□□□□ -0.49
Trim42-201ENSMUST00000035026 Gm20521D3Z5F7 333 aa11.96□□□□□ -0.49
Trim42-201ENSMUST00000035026 Tns3Q5SSZ5 1440 aa11.96□□□□□ -0.49
Trim42-201ENSMUST00000035026 Os9Q8K2C7 672 aa11.95□□□□□ -0.5
Trim42-201ENSMUST00000035026 Vgll3P85442 326 aa11.94□□□□□ -0.5
Trim42-201ENSMUST00000035026 Kcna4Q61423 654 aa11.94□□□□□ -0.5
Trim42-201ENSMUST00000035026 RalgapbQ8BQZ4 1484 aa11.94□□□□□ -0.5
Trim42-201ENSMUST00000035026 Plekhg1F6S200 1446 aa11.94□□□□□ -0.5
Trim42-201ENSMUST00000035026 Dapk1Q80YE7 1442 aa11.93□□□□□ -0.5
Trim42-201ENSMUST00000035026 Usp32F8VPZ3 1604 aa11.93□□□□□ -0.5
Trim42-201ENSMUST00000035026 Nphp4P59240 1425 aa11.93□□□□□ -0.5
Trim42-201ENSMUST00000035026 HnrnpmQ9D0E1 729 aaKnown RBP11.93□□□□□ -0.5
Trim42-201ENSMUST00000035026 Itsn2Q9Z0R6 1659 aa11.92□□□□□ -0.5
Trim42-201ENSMUST00000035026 Stard8Q8K031 1019 aa11.92□□□□□ -0.5
Trim42-201ENSMUST00000035026 Stk26Q99JT2 416 aa11.92□□□□□ -0.5
Trim42-201ENSMUST00000035026 Nwd1A6H603 1563 aa11.92□□□□□ -0.5
Trim42-201ENSMUST00000035026 Utp14aQ640M1 767 aaKnown RBP11.92□□□□□ -0.5
Trim42-201ENSMUST00000035026 Kif20bQ80WE4 1774 aaKnown RBP11.92□□□□□ -0.5
Trim42-201ENSMUST00000035026 Abca14E9Q8F8 1683 aa11.91□□□□□ -0.5
Trim42-201ENSMUST00000035026 Col14a1Q80X19 1797 aa11.91□□□□□ -0.5
Trim42-201ENSMUST00000035026 Ppargc1bQ8VHJ7 1014 aa11.91□□□□□ -0.5
Trim42-201ENSMUST00000035026 Sall2Q9QX96 1004 aa11.91□□□□□ -0.5
Trim42-201ENSMUST00000035026 NalcnQ8BXR5 1738 aa11.91□□□□□ -0.5
Trim42-201ENSMUST00000035026 Amigo3Q8C2S7 508 aa11.91□□□□□ -0.5
Trim42-201ENSMUST00000035026 D430041D05RikF6ZGR6 1678 aa11.9□□□□□ -0.5
Trim42-201ENSMUST00000035026 Usp40Q8BWR4 1235 aa11.9□□□□□ -0.5
Trim42-201ENSMUST00000035026 Rreb1Q3UH06 1700 aaKnown RBP11.9□□□□□ -0.5
Trim42-201ENSMUST00000035026 Rundc1Q0VDN7 615 aa11.89□□□□□ -0.51
Trim42-201ENSMUST00000035026 Taok2Q6ZQ29 1240 aa11.88□□□□□ -0.51
Trim42-201ENSMUST00000035026 Irx6Q9ER75 438 aa11.88□□□□□ -0.51
Trim42-201ENSMUST00000035026 Tmem94Q7TSH8 1360 aa11.88□□□□□ -0.51
Trim42-201ENSMUST00000035026 C3P01027 1663 aa11.87□□□□□ -0.51
Trim42-201ENSMUST00000035026 Pola1P33609 1465 aa11.87□□□□□ -0.51
Trim42-201ENSMUST00000035026 Upf2A2AT37 1269 aaKnown RBP11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 IqubQ8CDK3 788 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 Slain2Q8CI08 581 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 C5P06684 1680 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 Gm16486A0A1D5RMD1 1434 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 NgefQ8CHT1 710 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 Card11Q8CIS0 1159 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 Iqsec2Q5DU25 1478 aa11.86□□□□□ -0.51
Trim42-201ENSMUST00000035026 Als2Q920R0 1651 aa11.85□□□□□ -0.51
Trim42-201ENSMUST00000035026 Stag3O70576 1240 aa11.85□□□□□ -0.51
Trim42-201ENSMUST00000035026 Gtf2e1Q9D0D5 440 aa11.85□□□□□ -0.51
Trim42-201ENSMUST00000035026 Pik3c2bE9QAN8 1632 aa11.85□□□□□ -0.51
Trim42-201ENSMUST00000035026 Brd2Q7JJ13 798 aaKnown RBP11.84□□□□□ -0.51
Trim42-201ENSMUST00000035026 Q3UJC8 639 aa11.83□□□□□ -0.52
Trim42-201ENSMUST00000035026 Srcin1Q9QWI6 1250 aa11.83□□□□□ -0.52
Trim42-201ENSMUST00000035026 NktrP30415 1453 aa11.83□□□□□ -0.52
Trim42-201ENSMUST00000035026 Evi5lH3BKQ3 813 aa11.83□□□□□ -0.52
Trim42-201ENSMUST00000035026 Brinp3Q499E0 766 aa11.83□□□□□ -0.52
Trim42-201ENSMUST00000035026 Rock2P70336 1388 aa11.82□□□□□ -0.52
Trim42-201ENSMUST00000035026 Dnttip2Q8R2M2 758 aaKnown RBP11.82□□□□□ -0.52
Trim42-201ENSMUST00000035026 Kcnn1Q9EQR3 537 aa11.82□□□□□ -0.52
Trim42-201ENSMUST00000035026 Sipa1l2Q80TE4 1722 aa11.82□□□□□ -0.52
Trim42-201ENSMUST00000035026 Hspa1lP16627 641 aa11.82□□□□□ -0.52
Trim42-201ENSMUST00000035026 Atp2b2Q9R0K7 1198 aa11.82□□□□□ -0.52
Trim42-201ENSMUST00000035026 Mink1Q9JM52 1308 aa11.81□□□□□ -0.52
Trim42-201ENSMUST00000035026 Gm10563F6WIE4 79 aa11.8□□□□□ -0.52
Trim42-201ENSMUST00000035026 NeflP08551 543 aa11.8□□□□□ -0.52
Trim42-201ENSMUST00000035026 DekQ7TNV0 380 aaKnown RBP11.8□□□□□ -0.52
Trim42-201ENSMUST00000035026 Wnk3Q80XP9 1757 aa11.8□□□□□ -0.52
Trim42-201ENSMUST00000035026 ClspnQ80YR7 1315 aa11.79□□□□□ -0.52
Trim42-201ENSMUST00000035026 CenpjQ569L8 1344 aa11.78□□□□□ -0.52
Trim42-201ENSMUST00000035026 Zbtb4Q5F293 982 aa11.78□□□□□ -0.52
Trim42-201ENSMUST00000035026 Podxl2Q8CAE9 603 aa11.78□□□□□ -0.52
Trim42-201ENSMUST00000035026 Tnrc6bQ8BKI2 1810 aaKnown RBP11.77□□□□□ -0.52
Trim42-201ENSMUST00000035026 Rangap1P46061 589 aaKnown RBP11.77□□□□□ -0.53
Trim42-201ENSMUST00000035026 Fbxo41Q6NS60 873 aa11.77□□□□□ -0.53
Trim42-201ENSMUST00000035026 N4bp2F8VQG7 1678 aaKnown RBP11.77□□□□□ -0.53
Trim42-201ENSMUST00000035026 Camta1A2A891 1682 aa11.76□□□□□ -0.53
Trim42-201ENSMUST00000035026 Abcc10Q8R4P9 1501 aa11.76□□□□□ -0.53
Trim42-201ENSMUST00000035026 Pik3c2aQ61194 1686 aa11.76□□□□□ -0.53
Trim42-201ENSMUST00000035026 Cdk19Q8BWD8 501 aa11.76□□□□□ -0.53
Trim42-201ENSMUST00000035026 Sirt1Q923E4 737 aa11.76□□□□□ -0.53
Trim42-201ENSMUST00000035026 InsrP15208 1372 aa11.75□□□□□ -0.53
Trim42-201ENSMUST00000035026 Atf3Q60765 181 aa11.75□□□□□ -0.53
Trim42-201ENSMUST00000035026 BbxQ8VBW5 907 aa11.75□□□□□ -0.53
Trim42-201ENSMUST00000035026 DmtnQ9WV69 405 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms