RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 Ralbp1Q62172 648 aa18.54■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Ncbp3Q8BZR9 615 aaKnown RBP18.54■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Hfm1D3Z4R1 1434 aa18.54■□□□□ 0.56
Tpm1-202ENSMUST00000034928 RereQ80TZ9 1558 aa18.54■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Mroh1E0CZ22 1640 aa18.54■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Myom1Q62234 1667 aaKnown RBP18.54■□□□□ 0.56
Tpm1-202ENSMUST00000034928 AampJ3QN89 436 aa18.53■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Map4k4P97820 1233 aaKnown RBP18.53■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Usp19Q3UJD6 1360 aa18.52■□□□□ 0.56
Tpm1-202ENSMUST00000034928 CrbnQ8C7D2 445 aa18.52■□□□□ 0.56
Tpm1-202ENSMUST00000034928 IqubQ8CDK3 788 aa18.52■□□□□ 0.56
Tpm1-202ENSMUST00000034928 Ptch1Q61115 1434 aa18.52■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Rsph4aQ8BYM7 716 aa18.51■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Ift172Q6VH22 1749 aa18.51■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Dip2cE9PWR4 1557 aa18.51■□□□□ 0.55
Tpm1-202ENSMUST00000034928 CenpjQ569L8 1344 aa18.51■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Slc4a3P16283 1227 aa18.51■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Golga2Q921M4 999 aa18.5■□□□□ 0.55
Tpm1-202ENSMUST00000034928 AdgbG3UZ78 1657 aa18.5■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Lrrc7Q80TE7 1490 aa18.49■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Ttc37F8VPK0 1563 aa18.49■□□□□ 0.55
Tpm1-202ENSMUST00000034928 AU022751B1B0V2 589 aa18.49■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Uspl1Q3ULM6 1089 aa18.49■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Senp3Q9EP97 568 aaKnown RBP18.49■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Ccdc30Q8BVF4 654 aa18.48■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Speer4f1Q9D5Q6 258 aa18.48■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Knl1Q66JQ7 1612 aa18.47■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Stag3O70576 1240 aa18.47■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Kdm2bQ6P1G2 1309 aa18.46■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Kiaa1107Q80TK0 1369 aa18.46■□□□□ 0.55
Tpm1-202ENSMUST00000034928 Scaf11E9PZM7 1456 aaKnown RBP18.43■□□□□ 0.54
Tpm1-202ENSMUST00000034928 IbtkQ6ZPR6 1352 aaKnown RBP18.43■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Cald1E9QA15 768 aaKnown RBP18.42■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Ttll13A4Q9F6 804 aa18.41■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Med14A2ABV5 1459 aaKnown RBP18.41■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Adgrl1Q80TR1 1466 aa18.41■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Mapk8ip3Q9ESN9 1337 aa18.41■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Synj2Q9D2G5 1434 aa18.4■□□□□ 0.54
Tpm1-202ENSMUST00000034928 GsdmaQ9EST1 446 aa18.4■□□□□ 0.54
Tpm1-202ENSMUST00000034928 EspnQ9ET47 871 aa18.39■□□□□ 0.54
Tpm1-202ENSMUST00000034928 Arhgap23Q69ZH9 1483 aa18.39■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Nrxn1Q9CS84 1514 aa18.39■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Ccdc27Q3V036 639 aa18.37■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Iqsec2Q5DU25 1478 aa18.37■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Ciz1Q8VEH2 845 aa18.36■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Ahdc1Q6PAL7 1594 aaKnown RBP18.35■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Prrc2bQ7TPM1 1486 aaKnown RBP18.34■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Smc5Q8CG46 1101 aaKnown RBP18.34■□□□□ 0.53
Tpm1-202ENSMUST00000034928 Hecw2Q6I6G8 1578 aa18.33■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Plekhg1F6S200 1446 aa18.33■□□□□ 0.52
Tpm1-202ENSMUST00000034928 CltcQ68FD5 1675 aaKnown RBP18.32■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Neurod2Q62414 383 aa18.32■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Znf541Q0GGX2 1363 aa18.31■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Cnga1P29974 684 aa18.31■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Cul9Q80TT8 1865 aa18.31■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Yeats2Q3TUF7 1407 aa18.31■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Znf521Q6KAS7 1311 aa18.31■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Trim58Q5NCC9 485 aa18.3■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Fam135bQ9DAI6 1403 aa18.3■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Chmp5Q9D7S9 219 aa18.29■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Exosc9Q9JHI7 438 aaKnown RBP18.28■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Qser1A2BIE1 1698 aa18.28■□□□□ 0.52
Tpm1-202ENSMUST00000034928 Tmc1Q8R4P5 757 aa18.27■□□□□ 0.52
Tpm1-202ENSMUST00000034928 P2rx7Q9Z1M0 595 aa18.27■□□□□ 0.52
Tpm1-202ENSMUST00000034928 PtprmP28828 1452 aa18.26■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Pcdh10E9PXQ7 1057 aa18.26■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Ccdc9Q8VC31 543 aaKnown RBP18.26■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Gsto1O09131 240 aa18.25■□□□□ 0.51
Tpm1-202ENSMUST00000034928 FanciQ8K368 1330 aa18.24■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Shq1Q7TMX5 569 aa18.23■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Tsen2Q6P7W5 460 aa18.23■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Ccar1Q8CH18 1146 aaKnown RBP18.23■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Arhgef28P97433 1693 aa18.22■□□□□ 0.51
Tpm1-202ENSMUST00000034928 Ppm1gQ61074 542 aa18.21■□□□□ 0.51
Tpm1-202ENSMUST00000034928 NudcO35685 332 aaKnown RBP18.21■□□□□ 0.51
Tpm1-202ENSMUST00000034928 U2af1Q9D883 239 aaKnown RBP18.21■□□□□ 0.51
Tpm1-202ENSMUST00000034928 PaskQ8CEE6 1383 aa18.2■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Uhrf1bp1B2KF50 1429 aa18.2■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Naip7Q9JIB3 1402 aa18.2■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Fchsd2Q3USJ8 740 aa18.19■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Apbb1Q9QXJ1 710 aa18.19■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Nkx1-2P42580 305 aa18.18■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Stk26Q99JT2 416 aa18.18■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Itsn1Q9Z0R4 1714 aa18.18■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Usp32F8VPZ3 1604 aa18.17■□□□□ 0.5
Tpm1-202ENSMUST00000034928 NktrP30415 1453 aa18.17■□□□□ 0.5
Tpm1-202ENSMUST00000034928 B4galnt3Q6L8S8 986 aa18.17■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Atp1b4Q99ME6 356 aa18.16■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Cep170bQ80U49 1574 aa18.15■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Zc3h13E9Q784 1729 aaKnown RBP18.15■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Cavin4A2AMM0 362 aa18.15■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Hs1bp3Q3TC93 395 aa18.15■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Atl3Q91YH5 541 aa18.15■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Prdm10Q3UTQ7 1184 aa18.14■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Gas2l2Q5SSG4 860 aa18.14■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Utp14aQ640M1 767 aaKnown RBP18.14■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Tspyl2Q7TQI8 677 aa18.14■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Cdk19Q8BWD8 501 aa18.14■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Iqcf3Q9D498 203 aa18.14■□□□□ 0.5
Tpm1-202ENSMUST00000034928 Atp2b2Q9R0K7 1198 aa18.14■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms