RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 FYV7Q12247 151 aa-3.67□□□□□ -3
snR48snR48 YDR524C-BQ3E6R4 66 aa-3.67□□□□□ -3
snR48snR48 YOR394C-AQ8TGJ0 55 aa-3.7□□□□□ -3
snR48snR48 MHF2Q3E829 80 aa-3.71□□□□□ -3
snR48snR48 SCP1Q08873 200 aa-3.72□□□□□ -3
snR48snR48 YIL156W-BQ2V2P4 73 aa-3.72□□□□□ -3
snR48snR48 UTP10P42945 1769 aaKnown RBP-3.73□□□□□ -3.01
snR48snR48 YLL006W-AQ3E814 58 aa-3.73□□□□□ -3.01
snR48snR48 YBR200W-AQ3E755 54 aa-3.76□□□□□ -3.01
snR48snR48 COA2Q3E823 68 aa-3.76□□□□□ -3.01
snR48snR48 WIP1Q2V2P8 89 aa-3.77□□□□□ -3.01
snR48snR48 YDR042CQ03205 200 aa-3.79□□□□□ -3.02
snR48snR48 YDR119W-AQ2V2P9 66 aa-3.79□□□□□ -3.02
snR48snR48 TY3B-GQ99315 1547 aa-3.8□□□□□ -3.02
snR48snR48 APC1P53886 1748 aa-3.81□□□□□ -3.02
snR48snR48 REV3P14284 1504 aa-3.81□□□□□ -3.02
snR48snR48 RPA190P10964 1664 aaKnown RBP-3.81□□□□□ -3.02
snR48snR48 YOR011W-AQ3E807 68 aa-3.82□□□□□ -3.02
snR48snR48 GDB1Q06625 1536 aa-3.82□□□□□ -3.02
snR48snR48 YDL022C-AP0C5L6 82 aa-3.83□□□□□ -3.02
snR48snR48 YLR146W-AQ2V2P1 62 aa-3.83□□□□□ -3.02
snR48snR48 SUS1Q6WNK7 96 aa-3.83□□□□□ -3.02
snR48snR48 TSC11P40061 1430 aa-3.84□□□□□ -3.02
snR48snR48 GEA2P39993 1459 aaKnown RBP-3.85□□□□□ -3.03
snR48snR48 YGL258W-AQ3E740 77 aa-3.85□□□□□ -3.03
snR48snR48 MSL1P40567 111 aaPredicted RBP-3.86□□□□□ -3.03
snR48snR48 KOG1P38873 1557 aa-3.87□□□□□ -3.03
snR48snR48 YOR304C-AO14468 76 aa-3.87□□□□□ -3.03
snR48snR48 RPS27BP38711 82 aa-3.87□□□□□ -3.03
snR48snR48 RPS12P48589 143 aaKnown RBP-3.92□□□□□ -3.04
snR48snR48 HAP1P0CE41 1502 aa-3.94□□□□□ -3.04
snR48snR48 YBL039W-BP0C268 59 aa-3.94□□□□□ -3.04
snR48snR48 ATP17Q06405 101 aa-3.94□□□□□ -3.04
snR48snR48 YOR072W-BQ3E832 53 aa-3.94□□□□□ -3.04
snR48snR48 YOR105WQ08504 108 aa-3.95□□□□□ -3.04
snR48snR48 VPS15P22219 1454 aa-3.97□□□□□ -3.04
snR48snR48 CUP1-1P0CX80 61 aa-3.98□□□□□ -3.05
snR48snR48 CUP1-2P0CX81 61 aa-3.98□□□□□ -3.05
snR48snR48 YGR146C-AQ8TGT9 53 aa-3.98□□□□□ -3.05
snR48snR48 YPL225WQ08971 146 aaKnown RBP-4□□□□□ -3.05
snR48snR48 YOR314WQ12506 109 aa-4□□□□□ -3.05
snR48snR48 YKL065W-AQ2V2P2 73 aa-4.02□□□□□ -3.05
snR48snR48 SWR1Q05471 1514 aa-4.02□□□□□ -3.05
snR48snR48 YMR175W-AQ3E766 64 aa-4.06□□□□□ -3.06
snR48snR48 SIN3P22579 1536 aa-4.09□□□□□ -3.06
snR48snR48 YMR082CQ04276 118 aa-4.12□□□□□ -3.07
snR48snR48 YER137CP40083 148 aaKnown RBP-4.13□□□□□ -3.07
snR48snR48 PDR10P51533 1564 aa-4.14□□□□□ -3.07
snR48snR48 Q0017Q9ZZX8 53 aa-4.15□□□□□ -3.07
snR48snR48 FIG2P25653 1609 aa-4.15□□□□□ -3.07
snR48snR48 YOR032W-AQ8TGS1 66 aa-4.17□□□□□ -3.08
snR48snR48 YBR230W-AQ3E762 66 aa-4.18□□□□□ -3.08
snR48snR48 YGR121W-AQ3E816 71 aa-4.21□□□□□ -3.08
snR48snR48 YGR035W-AQ45U48 73 aa-4.22□□□□□ -3.08
snR48snR48 QCR9P22289 66 aa-4.23□□□□□ -3.09
snR48snR48 YPR145C-AQ2V2P0 78 aa-4.23□□□□□ -3.09
snR48snR48 CSF1Q12150 2958 aa-4.26□□□□□ -3.09
snR48snR48 SPI1P40092 148 aa-4.27□□□□□ -3.09
snR48snR48 YCL001W-BQ96VH2 84 aa-4.27□□□□□ -3.09
snR48snR48 NUM1Q00402 2748 aa-4.32□□□□□ -3.1
snR48snR48 SWM2P40342 146 aa-4.32□□□□□ -3.1
snR48snR48 YSP2Q06681 1438 aa-4.33□□□□□ -3.1
snR48snR48 THO2P53552 1597 aaKnown RBP-4.34□□□□□ -3.1
snR48snR48 MDS3P53094 1487 aa-4.34□□□□□ -3.1
snR48snR48 YOR192C-CQ3E736 78 aa-4.34□□□□□ -3.1
snR48snR48 MMS22Q06164 1454 aa-4.35□□□□□ -3.11
snR48snR48 SSS1P35179 80 aa-4.35□□□□□ -3.11
snR48snR48 PAU7P39545 55 aa-4.35□□□□□ -3.11
snR48snR48 YGL194C-AQ2V2P6 80 aa-4.35□□□□□ -3.11
snR48snR48 HUB1Q6Q546 73 aa-4.37□□□□□ -3.11
snR48snR48 FKS3Q04952 1785 aa-4.37□□□□□ -3.11
snR48snR48 DNF1P32660 1571 aa-4.42□□□□□ -3.12
snR48snR48 TIM12P32830 109 aa-4.43□□□□□ -3.12
snR48snR48 YCR075W-AQ3E830 75 aa-4.45□□□□□ -3.12
snR48snR48 TRA1P38811 3744 aa-4.49□□□□□ -3.13
snR48snR48 YML054C-AQ3E809 52 aa-4.5□□□□□ -3.13
snR48snR48 CWP2P43497 92 aa-4.53□□□□□ -3.13
snR48snR48 PDR12Q02785 1511 aa-4.53□□□□□ -3.13
snR48snR48 ARO1P08566 1588 aaKnown RBP-4.54□□□□□ -3.14
snR48snR48 ZEO1Q08245 113 aa-4.55□□□□□ -3.14
snR48snR48 LTE1P07866 1435 aa-4.55□□□□□ -3.14
snR48snR48 SNQ2P32568 1501 aaKnown RBP-4.56□□□□□ -3.14
snR48snR48 ERI1P62651 68 aaKnown RBP-4.6□□□□□ -3.15
snR48snR48 YLR157W-DP0CE99 70 aa-4.63□□□□□ -3.15
snR48snR48 RPS30AP0CX33 63 aaKnown RBP-4.63□□□□□ -3.15
snR48snR48 RPS30BP0CX34 63 aaKnown RBP-4.63□□□□□ -3.15
snR48snR48 MLP1Q02455 1875 aaKnown RBP-4.63□□□□□ -3.15
snR48snR48 PDR15Q04182 1529 aaKnown RBP-4.67□□□□□ -3.16
snR48snR48 IQG1Q12280 1495 aa-4.68□□□□□ -3.16
snR48snR48 RPL29P05747 59 aaPredicted RBP-4.69□□□□□ -3.16
snR48snR48 IRA1P18963 3092 aa-4.69□□□□□ -3.16
snR48snR48 ESP1Q03018 1630 aa-4.7□□□□□ -3.16
snR48snR48 IRA2P19158 3079 aa-4.7□□□□□ -3.16
snR48snR48 TY1B-DR4Q07793 1604 aa-4.72□□□□□ -3.16
snR48snR48 YDR034C-AP0C289 58 aa-4.72□□□□□ -3.17
snR48snR48 YOR093CQ12275 1648 aa-4.72□□□□□ -3.17
snR48snR48 DNF2Q12675 1612 aa-4.72□□□□□ -3.17
snR48snR48 BCK1Q01389 1478 aa-4.77□□□□□ -3.17
snR48snR48 RRP5Q05022 1729 aaKnown RBP-4.8□□□□□ -3.18
snR48snR48 YOR316C-AQ3E806 69 aa-4.8□□□□□ -3.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms