RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W YCL048W-AQ2V2Q2 79 aa3.67□□□□□ -1.82
FOB1YDR110W PAU1P0CE88 120 aa3.67□□□□□ -1.82
FOB1YDR110W PAU14P0CE89 120 aa3.67□□□□□ -1.82
FOB1YDR110W SPI1P40092 148 aa3.67□□□□□ -1.82
FOB1YDR110W YIL163CP40448 117 aa3.67□□□□□ -1.82
FOB1YDR110W YKL023C-AQ2V2P3 75 aa3.67□□□□□ -1.82
FOB1YDR110W BRR2P32639 2163 aaKnown RBP3.67□□□□□ -1.82
FOB1YDR110W YDR010CQ12426 110 aa3.66□□□□□ -1.82
FOB1YDR110W CCW14O13547 238 aa3.64□□□□□ -1.83
FOB1YDR110W YMR230W-AQ3E7B5 62 aa3.64□□□□□ -1.83
FOB1YDR110W NOP10Q6Q547 58 aaPredicted RBP3.64□□□□□ -1.83
FOB1YDR110W CUP1-1P0CX80 61 aa3.63□□□□□ -1.83
FOB1YDR110W CUP1-2P0CX81 61 aa3.63□□□□□ -1.83
FOB1YDR110W YDR210WQ03482 75 aa3.63□□□□□ -1.83
FOB1YDR110W RDS3Q06835 107 aaPredicted RBP3.63□□□□□ -1.83
FOB1YDR110W YIL046W-AQ3E7Z4 54 aa3.63□□□□□ -1.83
FOB1YDR110W BSC4P53841 131 aa3.62□□□□□ -1.83
FOB1YDR110W PAU20Q08322 120 aa3.62□□□□□ -1.83
FOB1YDR110W YNL162W-AQ3E7A8 72 aa3.62□□□□□ -1.83
FOB1YDR110W TAR1Q8TGM6 124 aa3.61□□□□□ -1.83
FOB1YDR110W MRPS12P53732 153 aa3.61□□□□□ -1.83
FOB1YDR110W YDR114CQ04597 100 aa3.61□□□□□ -1.83
FOB1YDR110W RPL33AP05744 107 aaKnown RBP3.6□□□□□ -1.83
FOB1YDR110W LCL2Q08045 131 aa3.6□□□□□ -1.83
FOB1YDR110W YSF3P0C074 85 aaPredicted RBP3.59□□□□□ -1.83
FOB1YDR110W YHR007C-AQ07074 71 aa3.59□□□□□ -1.83
FOB1YDR110W CCW12Q12127 133 aa3.58□□□□□ -1.84
FOB1YDR110W GCN1P33892 2672 aaKnown RBP3.58□□□□□ -1.84
FOB1YDR110W YDL022C-AP0C5L6 82 aa3.58□□□□□ -1.84
FOB1YDR110W VAM10Q08474 114 aa3.57□□□□□ -1.84
FOB1YDR110W YOR032W-AQ8TGS1 66 aa3.57□□□□□ -1.84
FOB1YDR110W RPS11AP0CX47 156 aaKnown RBP3.56□□□□□ -1.84
FOB1YDR110W RPS11BP0CX48 156 aaKnown RBP3.56□□□□□ -1.84
FOB1YDR110W YBR032WP38223 100 aa3.56□□□□□ -1.84
FOB1YDR110W YKL018C-AQ3E7A7 99 aa3.56□□□□□ -1.84
FOB1YDR110W YEL008WP40001 126 aa3.55□□□□□ -1.84
FOB1YDR110W YIL086CP40503 102 aa3.55□□□□□ -1.84
FOB1YDR110W DSE2P38844 325 aa3.54□□□□□ -1.84
FOB1YDR110W AIM19P40502 157 aa3.54□□□□□ -1.84
FOB1YDR110W PRM7Q12459 698 aa3.54□□□□□ -1.84
FOB1YDR110W PAU7P39545 55 aa3.53□□□□□ -1.84
FOB1YDR110W EDC1P53080 175 aaPredicted RBP3.53□□□□□ -1.84
FOB1YDR110W PRP8P33334 2413 aaKnown RBP3.53□□□□□ -1.84
FOB1YDR110W YBR056W-AI2HB52 66 aa3.53□□□□□ -1.85
FOB1YDR110W TRA1P38811 3744 aa3.51□□□□□ -1.85
FOB1YDR110W AGA2P32781 87 aa3.51□□□□□ -1.85
FOB1YDR110W RPS27AP35997 82 aaKnown RBP3.51□□□□□ -1.85
FOB1YDR110W RPS27BP38711 82 aa3.51□□□□□ -1.85
FOB1YDR110W YGL260WP53056 76 aa3.51□□□□□ -1.85
FOB1YDR110W YNL042W-BQ3E7Z2 85 aa3.51□□□□□ -1.85
FOB1YDR110W YOR192C-CQ3E736 78 aa3.5□□□□□ -1.85
FOB1YDR110W YGL041C-BQ3E750 60 aa3.5□□□□□ -1.85
FOB1YDR110W YLR255CO13574 117 aa3.5□□□□□ -1.85
FOB1YDR110W YOR034C-AQ3E735 80 aa3.5□□□□□ -1.85
FOB1YDR110W MEC1P38111 2368 aa3.48□□□□□ -1.85
FOB1YDR110W YPR096CO13587 100 aa3.48□□□□□ -1.85
FOB1YDR110W YBR219CP38317 127 aa3.48□□□□□ -1.85
FOB1YDR110W YNL190WP53872 204 aa3.47□□□□□ -1.85
FOB1YDR110W RPS30AP0CX33 63 aaKnown RBP3.46□□□□□ -1.86
FOB1YDR110W RPS30BP0CX34 63 aaKnown RBP3.46□□□□□ -1.86
FOB1YDR110W YDR182W-AQ3E796 67 aa3.46□□□□□ -1.86
FOB1YDR110W YGR240C-AQ3E786 66 aa3.44□□□□□ -1.86
FOB1YDR110W COA3Q3E7B2 85 aa3.44□□□□□ -1.86
FOB1YDR110W AQY2P0CD90 149 aa3.43□□□□□ -1.86
FOB1YDR110W YCL042WP25572 119 aa3.43□□□□□ -1.86
FOB1YDR110W MGR2Q02889 113 aa3.42□□□□□ -1.86
FOB1YDR110W YMR122W-AQ3E842 84 aa3.42□□□□□ -1.86
FOB1YDR110W YOL166W-AQ8TGJ1 51 aa3.42□□□□□ -1.86
FOB1YDR110W RPL43AP0CX25 92 aaKnown RBP3.39□□□□□ -1.87
FOB1YDR110W RPL43BP0CX26 92 aa3.39□□□□□ -1.87
FOB1YDR110W NCE101Q02820 53 aa3.39□□□□□ -1.87
FOB1YDR110W ATP17Q06405 101 aa3.39□□□□□ -1.87
FOB1YDR110W SGF11Q03067 99 aa3.37□□□□□ -1.87
FOB1YDR110W BLM10P43583 2143 aa3.37□□□□□ -1.87
FOB1YDR110W YBR201C-AQ2V2Q3 67 aa3.36□□□□□ -1.87
FOB1YDR110W YCR001WP25347 104 aa3.36□□□□□ -1.87
FOB1YDR110W YNL122CP53921 115 aaPredicted RBP3.34□□□□□ -1.87
FOB1YDR110W LCL1Q02786 101 aa3.34□□□□□ -1.87
FOB1YDR110W MVB12P42939 101 aa3.32□□□□□ -1.88
FOB1YDR110W YNL146C-AQ3E7Z1 64 aa3.31□□□□□ -1.88
FOB1YDR110W HUB1Q6Q546 73 aa3.31□□□□□ -1.88
FOB1YDR110W Q0032Q9ZZX7 96 aa3.31□□□□□ -1.88
FOB1YDR110W SEC16P48415 2195 aaKnown RBP3.31□□□□□ -1.88
FOB1YDR110W YMR007WQ03675 126 aa3.29□□□□□ -1.88
FOB1YDR110W SHU1P38751 150 aa3.28□□□□□ -1.88
FOB1YDR110W ATP18P81450 59 aa3.28□□□□□ -1.88
FOB1YDR110W UTP20P35194 2493 aaKnown RBP3.27□□□□□ -1.89
FOB1YDR110W YJL009WP47078 108 aa3.26□□□□□ -1.89
FOB1YDR110W YLR146W-AQ2V2P1 62 aa3.25□□□□□ -1.89
FOB1YDR110W SDH6Q3E785 79 aa3.24□□□□□ -1.89
FOB1YDR110W YHR086W-AQ3E746 53 aa3.24□□□□□ -1.89
FOB1YDR110W SIP18P50263 79 aa3.22□□□□□ -1.89
FOB1YDR110W YOL097W-AQ3E7Y9 61 aa3.21□□□□□ -1.9
FOB1YDR110W YOR072WQ08486 104 aa3.19□□□□□ -1.9
FOB1YDR110W YMR001C-AQ8TGS9 76 aa3.19□□□□□ -1.9
FOB1YDR110W Q0297Q9ZZV8 51 aa3.19□□□□□ -1.9
FOB1YDR110W URA2P07259 2214 aaKnown RBP3.19□□□□□ -1.9
FOB1YDR110W YLR157W-DP0CE99 70 aa3.18□□□□□ -1.9
FOB1YDR110W YDL012CQ12489 107 aa3.17□□□□□ -1.9
FOB1YDR110W YJR107C-AP0CT86 78 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms