RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C RGI1P40043 161 aaPredicted RBP1.03□□□□□ -2.24
WHI3YNL197C TSC11P40061 1430 aa1.03□□□□□ -2.24
WHI3YNL197C YRF1-6P53819 1859 aa1.03□□□□□ -2.24
WHI3YNL197C YHR138CP38841 114 aaPredicted RBP1.03□□□□□ -2.25
WHI3YNL197C KRE5P22023 1365 aa1.02□□□□□ -2.25
WHI3YNL197C YCR101CP25607 182 aa1.02□□□□□ -2.25
WHI3YNL197C SWC7Q06707 132 aa1.02□□□□□ -2.25
WHI3YNL197C BNI1P41832 1953 aa1.02□□□□□ -2.25
WHI3YNL197C YLR419WQ06698 1435 aaKnown RBP1.02□□□□□ -2.25
WHI3YNL197C YOL118CQ08259 102 aa1.01□□□□□ -2.25
WHI3YNL197C YOS1Q3E834 85 aa1.01□□□□□ -2.25
WHI3YNL197C MDN1Q12019 4910 aaKnown RBP1.01□□□□□ -2.25
WHI3YNL197C UBC4P15731 148 aa1.01□□□□□ -2.25
WHI3YNL197C IMP2P46972 177 aa1.01□□□□□ -2.25
WHI3YNL197C YCL048W-AQ2V2Q2 79 aa1□□□□□ -2.25
WHI3YNL197C UBC5P15732 148 aa0.99□□□□□ -2.25
WHI3YNL197C YMR090WQ04304 227 aaKnown RBP0.99□□□□□ -2.25
WHI3YNL197C BLM10P43583 2143 aa0.99□□□□□ -2.25
WHI3YNL197C YBR090CP38253 122 aa0.99□□□□□ -2.25
WHI3YNL197C SNF2P22082 1703 aa0.98□□□□□ -2.25
WHI3YNL197C SRB6P32570 121 aa0.98□□□□□ -2.25
WHI3YNL197C FYV7Q12247 151 aa0.98□□□□□ -2.25
WHI3YNL197C POL2P21951 2222 aaKnown RBP0.98□□□□□ -2.25
WHI3YNL197C GEA1P47102 1408 aaPredicted RBP0.98□□□□□ -2.25
WHI3YNL197C PAU5P43575 122 aa0.97□□□□□ -2.25
WHI3YNL197C BUD4P47136 1447 aa0.97□□□□□ -2.25
WHI3YNL197C GCV3P39726 170 aaPredicted RBP0.97□□□□□ -2.25
WHI3YNL197C RSM19P53733 91 aaPredicted RBP0.97□□□□□ -2.25
WHI3YNL197C YDR210WQ03482 75 aa0.97□□□□□ -2.25
WHI3YNL197C PDR11P40550 1411 aa0.96□□□□□ -2.26
WHI3YNL197C TY4B-HP0C2J7 1802 aa0.96□□□□□ -2.26
WHI3YNL197C CCW14O13547 238 aa0.96□□□□□ -2.26
WHI3YNL197C SHU1P38751 150 aa0.96□□□□□ -2.26
WHI3YNL197C YPL038W-AQ3E7B4 63 aa0.96□□□□□ -2.26
WHI3YNL197C TY3B-IQ7LHG5 1498 aaKnown RBP0.95□□□□□ -2.26
WHI3YNL197C SIN3P22579 1536 aa0.95□□□□□ -2.26
WHI3YNL197C YCR095W-AQ3E787 52 aa0.95□□□□□ -2.26
WHI3YNL197C GEA2P39993 1459 aaKnown RBP0.95□□□□□ -2.26
WHI3YNL197C YHR173CP38864 112 aa0.94□□□□□ -2.26
WHI3YNL197C YIL086CP40503 102 aa0.94□□□□□ -2.26
WHI3YNL197C TOP2P06786 1428 aaKnown RBP0.94□□□□□ -2.26
WHI3YNL197C FMP27Q06179 2628 aa0.94□□□□□ -2.26
WHI3YNL197C REV3P14284 1504 aa0.93□□□□□ -2.26
WHI3YNL197C KSH1Q8TGJ3 72 aa0.93□□□□□ -2.26
WHI3YNL197C MYO1P08964 1928 aa0.92□□□□□ -2.26
WHI3YNL197C BPT1P14772 1559 aa0.92□□□□□ -2.26
WHI3YNL197C PAU6P0CE90 120 aa0.92□□□□□ -2.26
WHI3YNL197C PAU18P0CE91 120 aa0.92□□□□□ -2.26
WHI3YNL197C MIX14Q04341 121 aa0.92□□□□□ -2.26
WHI3YNL197C YPL225WQ08971 146 aaKnown RBP0.92□□□□□ -2.26
WHI3YNL197C ROX3P25046 220 aa0.91□□□□□ -2.26
WHI3YNL197C CAT8P39113 1433 aa0.91□□□□□ -2.26
WHI3YNL197C SNA2P56508 79 aa0.9□□□□□ -2.26
WHI3YNL197C ZEO1Q08245 113 aa0.9□□□□□ -2.26
WHI3YNL197C GCN1P33892 2672 aaKnown RBP0.9□□□□□ -2.27
WHI3YNL197C YOR289WQ12012 251 aaPredicted RBP0.9□□□□□ -2.27
WHI3YNL197C YDR010CQ12426 110 aa0.9□□□□□ -2.27
WHI3YNL197C YBR072C-AQ3E794 53 aa0.9□□□□□ -2.27
WHI3YNL197C YOL164W-AQ3E7A5 60 aa0.9□□□□□ -2.27
WHI3YNL197C MPC2P38857 129 aa0.89□□□□□ -2.27
WHI3YNL197C RRT15Q3E811 62 aa0.89□□□□□ -2.27
WHI3YNL197C UTP20P35194 2493 aaKnown RBP0.89□□□□□ -2.27
WHI3YNL197C MRX7P53869 86 aa0.88□□□□□ -2.27
WHI3YNL197C YHL005CP38752 130 aa0.88□□□□□ -2.27
WHI3YNL197C YNR034W-AQ3E841 98 aa0.88□□□□□ -2.27
WHI3YNL197C COX12Q01519 83 aa0.87□□□□□ -2.27
WHI3YNL197C RPA12P32529 125 aaKnown RBP0.87□□□□□ -2.27
WHI3YNL197C YBL071CP38185 102 aa0.87□□□□□ -2.27
WHI3YNL197C SRB8P25648 1427 aa0.86□□□□□ -2.27
WHI3YNL197C HMRA1P0CY11 126 aa0.86□□□□□ -2.27
WHI3YNL197C SPC1P46965 94 aa0.85□□□□□ -2.27
WHI3YNL197C COX19Q3E731 98 aa0.85□□□□□ -2.27
WHI3YNL197C NTE1Q04958 1679 aa0.85□□□□□ -2.27
WHI3YNL197C YRF1-1P0CX20 1796 aa0.84□□□□□ -2.27
WHI3YNL197C YRF1-5P0CX21 1796 aa0.84□□□□□ -2.27
WHI3YNL197C YRF1-8P0CX22 1796 aa0.84□□□□□ -2.27
WHI3YNL197C FAS2P19097 1887 aaKnown RBP0.84□□□□□ -2.27
WHI3YNL197C MRP17P28778 131 aa0.84□□□□□ -2.28
WHI3YNL197C EMC5P40540 141 aa0.84□□□□□ -2.28
WHI3YNL197C ICY1Q04329 127 aa0.84□□□□□ -2.28
WHI3YNL197C MRPL38P35996 138 aaPredicted RBP0.83□□□□□ -2.28
WHI3YNL197C NHP10Q03435 203 aa0.83□□□□□ -2.28
WHI3YNL197C PAU20Q08322 120 aa0.83□□□□□ -2.28
WHI3YNL197C SSN2P38931 1420 aa0.82□□□□□ -2.28
WHI3YNL197C RSF2P46974 1380 aa0.82□□□□□ -2.28
WHI3YNL197C RPS11AP0CX47 156 aaKnown RBP0.82□□□□□ -2.28
WHI3YNL197C RPS11BP0CX48 156 aaKnown RBP0.82□□□□□ -2.28
WHI3YNL197C PDR10P51533 1564 aa0.82□□□□□ -2.28
WHI3YNL197C SKI3P17883 1432 aaKnown RBP0.81□□□□□ -2.28
WHI3YNL197C RPA190P10964 1664 aaKnown RBP0.81□□□□□ -2.28
WHI3YNL197C MSL1P40567 111 aaPredicted RBP0.8□□□□□ -2.28
WHI3YNL197C YCL001W-BQ96VH2 84 aa0.79□□□□□ -2.28
WHI3YNL197C PAU1P0CE88 120 aa0.79□□□□□ -2.28
WHI3YNL197C PAU14P0CE89 120 aa0.79□□□□□ -2.28
WHI3YNL197C PAU8P0CE92 120 aa0.79□□□□□ -2.28
WHI3YNL197C PAU11P0CE93 120 aa0.79□□□□□ -2.28
WHI3YNL197C PAU13P38725 120 aa0.79□□□□□ -2.28
WHI3YNL197C AIM19P40502 157 aa0.79□□□□□ -2.28
WHI3YNL197C PAU10Q03050 120 aa0.79□□□□□ -2.28
WHI3YNL197C PAU9Q3E770 120 aa0.79□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms