RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC5	YMR001C	UTP20	P35194	2493 aa	Known RBP	0.74	□□□□□ -2.29
CDC5	YMR001C	PAU15	P40585	124 aa		0.74	□□□□□ -2.29
CDC5	YMR001C	RTR2	Q12378	196 aa		0.74	□□□□□ -2.29
CDC5	YMR001C	BUD4	P47136	1447 aa		0.74	□□□□□ -2.29
CDC5	YMR001C	YOR093C	Q12275	1648 aa		0.72	□□□□□ -2.29
CDC5	YMR001C	LSM6	Q06406	86 aa	Known RBP	0.72	□□□□□ -2.29
CDC5	YMR001C	PAU16	P35994	123 aa		0.71	□□□□□ -2.3
CDC5	YMR001C	MYO1	P08964	1928 aa		0.71	□□□□□ -2.3
CDC5	YMR001C	MIC10	Q96VH5	97 aa		0.71	□□□□□ -2.3
CDC5	YMR001C	YRF1-6	P53819	1859 aa		0.7	□□□□□ -2.3
CDC5	YMR001C	YOL164W-A	Q3E7A5	60 aa		0.7	□□□□□ -2.3
CDC5	YMR001C	LYS2	P07702	1392 aa		0.7	□□□□□ -2.3
CDC5	YMR001C	KRE5	P22023	1365 aa		0.7	□□□□□ -2.3
CDC5	YMR001C	YMR103C	Q04436	120 aa		0.69	□□□□□ -2.3
CDC5	YMR001C	RPS12	P48589	143 aa	Known RBP	0.68	□□□□□ -2.3
CDC5	YMR001C	PDR15	Q04182	1529 aa	Known RBP	0.68	□□□□□ -2.3
CDC5	YMR001C	REV3	P14284	1504 aa		0.68	□□□□□ -2.3
CDC5	YMR001C	GCV3	P39726	170 aa	Predicted RBP	0.67	□□□□□ -2.3
CDC5	YMR001C	GTT1	P40582	234 aa		0.67	□□□□□ -2.3
CDC5	YMR001C	GNA1	P43577	159 aa	Predicted RBP	0.67	□□□□□ -2.3
CDC5	YMR001C	TSC11	P40061	1430 aa		0.66	□□□□□ -2.3
CDC5	YMR001C	RPA12	P32529	125 aa	Known RBP	0.66	□□□□□ -2.3
CDC5	YMR001C	PDR11	P40550	1411 aa		0.65	□□□□□ -2.3
CDC5	YMR001C	PAU5	P43575	122 aa		0.65	□□□□□ -2.3
CDC5	YMR001C	HUR1	P45820	110 aa		0.65	□□□□□ -2.3
CDC5	YMR001C	RSM19	P53733	91 aa	Predicted RBP	0.65	□□□□□ -2.3
CDC5	YMR001C	RRT15	Q3E811	62 aa		0.65	□□□□□ -2.3
CDC5	YMR001C	YCR101C	P25607	182 aa		0.65	□□□□□ -2.31
CDC5	YMR001C	YHR173C	P38864	112 aa		0.65	□□□□□ -2.31
CDC5	YMR001C	UBC5	P15732	148 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	LTE1	P07866	1435 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	YLR419W	Q06698	1435 aa	Known RBP	0.64	□□□□□ -2.31
CDC5	YMR001C	YRF1-1	P0CX20	1796 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	YRF1-5	P0CX21	1796 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	YRF1-8	P0CX22	1796 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	UBC4	P15731	148 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	RGI1	P40043	161 aa	Predicted RBP	0.64	□□□□□ -2.31
CDC5	YMR001C	YDR210W	Q03482	75 aa		0.64	□□□□□ -2.31
CDC5	YMR001C	TY4B-H	P0C2J7	1802 aa		0.63	□□□□□ -2.31
CDC5	YMR001C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.63	□□□□□ -2.31
CDC5	YMR001C	ROX3	P25046	220 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	SHU1	P38751	150 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	IMP2	P46972	177 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	YGR164W	P53291	111 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	NTE1	Q04958	1679 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	YBR090C	P38253	122 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	YOL118C	Q08259	102 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	FYV7	Q12247	151 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	KSH1	Q8TGJ3	72 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	TEL1	P38110	2787 aa		0.62	□□□□□ -2.31
CDC5	YMR001C	PAU6	P0CE90	120 aa		0.61	□□□□□ -2.31
CDC5	YMR001C	PAU18	P0CE91	120 aa		0.61	□□□□□ -2.31
CDC5	YMR001C	FAS2	P19097	1887 aa	Known RBP	0.61	□□□□□ -2.31
CDC5	YMR001C	CAT8	P39113	1433 aa		0.61	□□□□□ -2.31
CDC5	YMR001C	YHR138C	P38841	114 aa	Predicted RBP	0.61	□□□□□ -2.31
CDC5	YMR001C	YMR090W	Q04304	227 aa	Known RBP	0.61	□□□□□ -2.31
CDC5	YMR001C	YOS1	Q3E834	85 aa		0.61	□□□□□ -2.31
CDC5	YMR001C	VMA21	P41806	77 aa		0.6	□□□□□ -2.31
CDC5	YMR001C	RPA190	P10964	1664 aa	Known RBP	0.6	□□□□□ -2.31
CDC5	YMR001C	TOP2	P06786	1428 aa	Known RBP	0.59	□□□□□ -2.31
CDC5	YMR001C	YOR289W	Q12012	251 aa	Predicted RBP	0.59	□□□□□ -2.32
CDC5	YMR001C	YDR010C	Q12426	110 aa		0.59	□□□□□ -2.32
CDC5	YMR001C	YCR095W-A	Q3E787	52 aa		0.59	□□□□□ -2.32
CDC5	YMR001C	YPK9	Q12697	1472 aa		0.59	□□□□□ -2.32
CDC5	YMR001C	DNF2	Q12675	1612 aa		0.58	□□□□□ -2.32
CDC5	YMR001C	THO2	P53552	1597 aa	Known RBP	0.58	□□□□□ -2.32
CDC5	YMR001C	CCW14	O13547	238 aa		0.58	□□□□□ -2.32
CDC5	YMR001C	YIL086C	P40503	102 aa		0.58	□□□□□ -2.32
CDC5	YMR001C	YPL038W-A	Q3E7B4	63 aa		0.58	□□□□□ -2.32
CDC5	YMR001C	YBL071C	P38185	102 aa		0.57	□□□□□ -2.32
CDC5	YMR001C	SPC1	P46965	94 aa		0.57	□□□□□ -2.32
CDC5	YMR001C	YNR034W-A	Q3E841	98 aa		0.57	□□□□□ -2.32
CDC5	YMR001C	MRP17	P28778	131 aa		0.56	□□□□□ -2.32
CDC5	YMR001C	BPT1	P14772	1559 aa		0.56	□□□□□ -2.32
CDC5	YMR001C	NHP10	Q03435	203 aa		0.56	□□□□□ -2.32
CDC5	YMR001C	YCL048W-A	Q2V2Q2	79 aa		0.56	□□□□□ -2.32
CDC5	YMR001C	YBR072C-A	Q3E794	53 aa		0.56	□□□□□ -2.32
CDC5	YMR001C	GEA1	P47102	1408 aa	Predicted RBP	0.55	□□□□□ -2.32
CDC5	YMR001C	HMRA1	P0CY11	126 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	MIX14	Q04341	121 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	SWC7	Q06707	132 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	HIR3	P47171	1648 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	SRB6	P32570	121 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	MRPL38	P35996	138 aa	Predicted RBP	0.55	□□□□□ -2.32
CDC5	YMR001C	EMC5	P40540	141 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	MRX7	P53869	86 aa		0.55	□□□□□ -2.32
CDC5	YMR001C	YPL225W	Q08971	146 aa	Known RBP	0.55	□□□□□ -2.32
CDC5	YMR001C	SNA2	P56508	79 aa		0.54	□□□□□ -2.32
CDC5	YMR001C	MMS1	Q06211	1407 aa		0.54	□□□□□ -2.32
CDC5	YMR001C	ESC1	Q03661	1658 aa	Known RBP	0.53	□□□□□ -2.32
CDC5	YMR001C	TOR2	P32600	2474 aa	Known RBP	0.53	□□□□□ -2.32
CDC5	YMR001C	RSF2	P46974	1380 aa		0.53	□□□□□ -2.32
CDC5	YMR001C	ZEO1	Q08245	113 aa		0.53	□□□□□ -2.32
CDC5	YMR001C	RIM15	P43565	1770 aa		0.53	□□□□□ -2.33
CDC5	YMR001C	PDR10	P51533	1564 aa		0.52	□□□□□ -2.33
CDC5	YMR001C	PAU8	P0CE92	120 aa		0.52	□□□□□ -2.33
CDC5	YMR001C	PAU11	P0CE93	120 aa		0.52	□□□□□ -2.33
CDC5	YMR001C	PAU13	P38725	120 aa		0.52	□□□□□ -2.33
CDC5	YMR001C	RPS29B	P41058	56 aa	Known RBP	0.52	□□□□□ -2.33
CDC5	YMR001C	PAU4	P53427	120 aa		0.52	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 82.6 ms