RNA–Protein interactions for RNA: YMR001C

CDC5, Transcript of Polo-like kinase, yeastyeast

Gene CDC5, Length 2,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC5YMR001C DRS1P32892 752 aaKnown RBP10.83□□□□□ -0.68
CDC5YMR001C MTC1P47018 478 aaKnown RBP10.64□□□□□ -0.71
CDC5YMR001C BFR2Q06631 534 aaKnown RBP9.41□□□□□ -0.9
CDC5YMR001C AVT3P36062 692 aa9.26□□□□□ -0.93
CDC5YMR001C DIP2Q12220 943 aaPredicted RBP9.19□□□□□ -0.94
CDC5YMR001C TFA1P36100 482 aa9.14□□□□□ -0.95
CDC5YMR001C RSE1Q04693 1361 aaKnown RBP8.52□□□□□ -1.04
CDC5YMR001C ISW2Q08773 1120 aa8.47□□□□□ -1.05
CDC5YMR001C PRI1P10363 409 aa8.46□□□□□ -1.06
CDC5YMR001C RPG1P38249 964 aaKnown RBP8.44□□□□□ -1.06
CDC5YMR001C FAP1P53971 965 aa8.3□□□□□ -1.08
CDC5YMR001C RPL17AP05740 184 aaKnown RBP8.21□□□□□ -1.09
CDC5YMR001C RPL17BP46990 184 aaKnown RBP8.21□□□□□ -1.09
CDC5YMR001C AAD16Q02895 342 aa8.17□□□□□ -1.1
CDC5YMR001C SPT21P35209 758 aa8.14□□□□□ -1.11
CDC5YMR001C REB1P21538 810 aa8.01□□□□□ -1.13
CDC5YMR001C RIM101P33400 625 aa8□□□□□ -1.13
CDC5YMR001C TSR3Q12094 313 aaKnown RBP7.99□□□□□ -1.13
CDC5YMR001C PRY3P47033 881 aa7.82□□□□□ -1.16
CDC5YMR001C OXP1P28273 1286 aa7.81□□□□□ -1.16
CDC5YMR001C YKR023WP36119 530 aaKnown RBP7.81□□□□□ -1.16
CDC5YMR001C YCK3P39962 524 aa7.78□□□□□ -1.16
CDC5YMR001C PTP3P40048 928 aa7.75□□□□□ -1.17
CDC5YMR001C SSP1P38871 571 aa7.64□□□□□ -1.19
CDC5YMR001C YLR271WQ06152 274 aa7.61□□□□□ -1.19
CDC5YMR001C TFC8Q12308 588 aa7.6□□□□□ -1.19
CDC5YMR001C RQC2Q12532 1038 aaKnown RBP7.58□□□□□ -1.2
CDC5YMR001C CDC27P38042 758 aa7.58□□□□□ -1.2
CDC5YMR001C DMA1P38823 416 aa7.57□□□□□ -1.2
CDC5YMR001C DCD1P06773 312 aa7.57□□□□□ -1.2
CDC5YMR001C HOP09932 586 aa7.56□□□□□ -1.2
CDC5YMR001C MRPL32P25348 183 aa7.54□□□□□ -1.2
CDC5YMR001C YAH1Q12184 172 aaKnown RBP7.54□□□□□ -1.2
CDC5YMR001C YIL055CP40523 627 aaKnown RBP7.43□□□□□ -1.22
CDC5YMR001C RSM7P47150 247 aa7.42□□□□□ -1.22
CDC5YMR001C CST9Q06032 482 aa7.41□□□□□ -1.22
CDC5YMR001C BCH2P36122 765 aa7.4□□□□□ -1.22
CDC5YMR001C PSD2P53037 1138 aaKnown RBP7.4□□□□□ -1.22
CDC5YMR001C MGA2P40578 1113 aa7.37□□□□□ -1.23
CDC5YMR001C HAA1Q12753 694 aaKnown RBP7.37□□□□□ -1.23
CDC5YMR001C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
CDC5YMR001C AI2P03876 854 aa7.31□□□□□ -1.24
CDC5YMR001C EPS1P40557 701 aa7.23□□□□□ -1.25
CDC5YMR001C BDF1P35817 686 aa7.21□□□□□ -1.25
CDC5YMR001C SAS10Q12136 610 aaPredicted RBP7.21□□□□□ -1.25
CDC5YMR001C RCR1P38212 213 aa7.19□□□□□ -1.26
CDC5YMR001C MAP2P38174 421 aaKnown RBP7.16□□□□□ -1.26
CDC5YMR001C RAM2P29703 316 aa7.15□□□□□ -1.26
CDC5YMR001C SCY1P53009 804 aa7.13□□□□□ -1.27
CDC5YMR001C BBC1P47068 1157 aa7.12□□□□□ -1.27
CDC5YMR001C UBP10P53874 792 aaPredicted RBP7.1□□□□□ -1.27
CDC5YMR001C MRM1P25270 412 aa7.1□□□□□ -1.27
CDC5YMR001C VPS29P38759 282 aa7.02□□□□□ -1.29
CDC5YMR001C YGL015CP33199 130 aa6.99□□□□□ -1.29
CDC5YMR001C RTG3P38165 486 aa6.97□□□□□ -1.29
CDC5YMR001C LEU3P08638 886 aa6.95□□□□□ -1.3
CDC5YMR001C YPR148CQ06523 435 aa6.95□□□□□ -1.3
CDC5YMR001C SET1P38827 1080 aaKnown RBP6.95□□□□□ -1.3
CDC5YMR001C MAK11P20484 414 aaKnown RBP6.94□□□□□ -1.3
CDC5YMR001C SLX5P32828 619 aaKnown RBP6.93□□□□□ -1.3
CDC5YMR001C LEO1P38439 464 aa6.93□□□□□ -1.3
CDC5YMR001C STS1P38637 319 aa6.93□□□□□ -1.3
CDC5YMR001C EDS1P38073 919 aa6.86□□□□□ -1.31
CDC5YMR001C COQ8P27697 501 aa6.84□□□□□ -1.31
CDC5YMR001C YMR1P47147 688 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
CDC5YMR001C NSR1P27476 414 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
CDC5YMR001C DBP1P24784 617 aaKnown RBP6.8□□□□□ -1.32
CDC5YMR001C VPS70P47161 811 aa6.8□□□□□ -1.32
CDC5YMR001C YFR006WP43590 535 aa6.79□□□□□ -1.32
CDC5YMR001C TAF7Q05021 590 aa6.77□□□□□ -1.33
CDC5YMR001C YOR238WQ08634 303 aa6.76□□□□□ -1.33
CDC5YMR001C DSF2P38213 736 aa6.74□□□□□ -1.33
CDC5YMR001C TGL3P40308 642 aa6.74□□□□□ -1.33
CDC5YMR001C IFH1P39520 1085 aa6.74□□□□□ -1.33
CDC5YMR001C CKB1P43639 278 aa6.74□□□□□ -1.33
CDC5YMR001C NOP53Q12080 455 aaKnown RBP6.74□□□□□ -1.33
CDC5YMR001C PTC3P34221 468 aaKnown RBP6.71□□□□□ -1.34
CDC5YMR001C MIF2P35201 549 aa6.71□□□□□ -1.34
CDC5YMR001C PIB1Q06651 286 aa6.7□□□□□ -1.34
CDC5YMR001C MST1P07236 462 aa6.7□□□□□ -1.34
CDC5YMR001C VMA1P17255 1071 aaKnown RBP6.68□□□□□ -1.34
CDC5YMR001C TIF4632P39936 914 aaKnown RBP6.68□□□□□ -1.34
CDC5YMR001C YAP5P40574 245 aa6.68□□□□□ -1.34
CDC5YMR001C PBS2P08018 668 aa6.67□□□□□ -1.34
CDC5YMR001C RPN1P38764 993 aaKnown RBP6.65□□□□□ -1.35
CDC5YMR001C SPB4P25808 606 aaPredicted RBP6.64□□□□□ -1.35
CDC5YMR001C NUP42P49686 430 aaKnown RBP6.64□□□□□ -1.35
CDC5YMR001C NST1P53935 1240 aa6.64□□□□□ -1.35
CDC5YMR001C YDR090CQ03193 310 aa6.64□□□□□ -1.35
CDC5YMR001C SOL3P38858 249 aa6.63□□□□□ -1.35
CDC5YMR001C ABP1P15891 592 aaKnown RBP6.62□□□□□ -1.35
CDC5YMR001C UBP14P38237 781 aaKnown RBP6.62□□□□□ -1.35
CDC5YMR001C SAM3Q08986 587 aa6.62□□□□□ -1.35
CDC5YMR001C REF2P42073 533 aaPredicted RBP6.61□□□□□ -1.35
CDC5YMR001C DIT2P21595 489 aa6.59□□□□□ -1.35
CDC5YMR001C COX6P00427 148 aa6.58□□□□□ -1.36
CDC5YMR001C YLR326WQ06170 240 aaKnown RBP6.57□□□□□ -1.36
CDC5YMR001C DMA2P53924 522 aa6.56□□□□□ -1.36
CDC5YMR001C IES2P40154 320 aa6.55□□□□□ -1.36
CDC5YMR001C YNR021WP53723 404 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms