RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C YBR072C-AQ3E794 53 aa0.6□□□□□ -2.31
NUP188YML103C PDR11P40550 1411 aa0.6□□□□□ -2.31
NUP188YML103C YHR173CP38864 112 aa0.59□□□□□ -2.31
NUP188YML103C LYS2P07702 1392 aa0.59□□□□□ -2.31
NUP188YML103C RSM19P53733 91 aaPredicted RBP0.59□□□□□ -2.31
NUP188YML103C YCL001W-BQ96VH2 84 aa0.59□□□□□ -2.31
NUP188YML103C YLR419WQ06698 1435 aaKnown RBP0.59□□□□□ -2.31
NUP188YML103C ACC1Q00955 2233 aaKnown RBP0.59□□□□□ -2.31
NUP188YML103C UBC4P15731 148 aa0.59□□□□□ -2.32
NUP188YML103C PAU24P38155 120 aa0.59□□□□□ -2.32
NUP188YML103C YHL005CP38752 130 aa0.59□□□□□ -2.32
NUP188YML103C AIM19P40502 157 aa0.59□□□□□ -2.32
NUP188YML103C TRA1P38811 3744 aa0.59□□□□□ -2.32
NUP188YML103C UBC5P15732 148 aa0.59□□□□□ -2.32
NUP188YML103C ATX1P38636 73 aa0.59□□□□□ -2.32
NUP188YML103C YOR034C-AQ3E735 80 aa0.59□□□□□ -2.32
NUP188YML103C MIC10Q96VH5 97 aa0.58□□□□□ -2.32
NUP188YML103C TY4B-JP47024 1803 aa0.58□□□□□ -2.32
NUP188YML103C SKI3P17883 1432 aaKnown RBP0.58□□□□□ -2.32
NUP188YML103C PAU20Q08322 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU1P0CE88 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU14P0CE89 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU6P0CE90 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU18P0CE91 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU8P0CE92 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU11P0CE93 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU13P38725 120 aa0.58□□□□□ -2.32
NUP188YML103C PAU10Q03050 120 aa0.58□□□□□ -2.32
NUP188YML103C COX19Q3E731 98 aa0.58□□□□□ -2.32
NUP188YML103C PAU9Q3E770 120 aa0.58□□□□□ -2.32
NUP188YML103C CCW14O13547 238 aa0.58□□□□□ -2.32
NUP188YML103C YIL086CP40503 102 aa0.58□□□□□ -2.32
NUP188YML103C SRB8P25648 1427 aa0.58□□□□□ -2.32
NUP188YML103C MSL1P40567 111 aaPredicted RBP0.57□□□□□ -2.32
NUP188YML103C MRX7P53869 86 aa0.57□□□□□ -2.32
NUP188YML103C YDR010CQ12426 110 aa0.57□□□□□ -2.32
NUP188YML103C TY3B-IQ7LHG5 1498 aaKnown RBP0.57□□□□□ -2.32
NUP188YML103C PAU4P53427 120 aa0.57□□□□□ -2.32
NUP188YML103C NHP10Q03435 203 aa0.57□□□□□ -2.32
NUP188YML103C RSF2P46974 1380 aa0.57□□□□□ -2.32
NUP188YML103C HMRA1P0CY11 126 aa0.57□□□□□ -2.32
NUP188YML103C NHP2P32495 156 aaPredicted RBP0.57□□□□□ -2.32
NUP188YML103C YBR292CP38357 123 aa0.57□□□□□ -2.32
NUP188YML103C MPC2P38857 129 aa0.57□□□□□ -2.32
NUP188YML103C YIR020CP40575 100 aa0.57□□□□□ -2.32
NUP188YML103C SHU1P38751 150 aa0.56□□□□□ -2.32
NUP188YML103C YRF1-3P0CX14 1859 aa0.56□□□□□ -2.32
NUP188YML103C YRF1-7P0CX15 1859 aa0.56□□□□□ -2.32
NUP188YML103C YDR029WQ12111 104 aa0.56□□□□□ -2.32
NUP188YML103C ICY1Q04329 127 aa0.56□□□□□ -2.32
NUP188YML103C ROX3P25046 220 aa0.56□□□□□ -2.32
NUP188YML103C YLR157W-EP0CF00 54 aa0.55□□□□□ -2.32
NUP188YML103C RSM18P40033 138 aa0.55□□□□□ -2.32
NUP188YML103C LCL1Q02786 101 aa0.55□□□□□ -2.32
NUP188YML103C YOR289WQ12012 251 aaPredicted RBP0.55□□□□□ -2.32
NUP188YML103C YLR307C-AQ3E825 87 aa0.55□□□□□ -2.32
NUP188YML103C YKL068W-AQ3E826 78 aa0.55□□□□□ -2.32
NUP188YML103C TOP2P06786 1428 aaKnown RBP0.55□□□□□ -2.32
NUP188YML103C CDC39P25655 2108 aaKnown RBP0.55□□□□□ -2.32
NUP188YML103C YBL071CP38185 102 aa0.55□□□□□ -2.32
NUP188YML103C KSH1Q8TGJ3 72 aa0.55□□□□□ -2.32
NUP188YML103C ECM12O13529 151 aa0.54□□□□□ -2.32
NUP188YML103C RPL38P49167 78 aaKnown RBP0.54□□□□□ -2.32
NUP188YML103C PAU5P43575 122 aa0.54□□□□□ -2.32
NUP188YML103C MRPS12P53732 153 aa0.54□□□□□ -2.32
NUP188YML103C SSN2P38931 1420 aa0.53□□□□□ -2.32
NUP188YML103C SLH1P53327 1967 aaKnown RBP0.53□□□□□ -2.32
NUP188YML103C YLR255CO13574 117 aa0.53□□□□□ -2.32
NUP188YML103C YHR214C-DP0CX93 97 aa0.53□□□□□ -2.32
NUP188YML103C RPS11AP0CX47 156 aaKnown RBP0.52□□□□□ -2.33
NUP188YML103C RPS11BP0CX48 156 aaKnown RBP0.52□□□□□ -2.33
NUP188YML103C YRF1-6P53819 1859 aa0.52□□□□□ -2.33
NUP188YML103C TOM6P33448 61 aa0.52□□□□□ -2.33
NUP188YML103C MRPL38P35996 138 aaPredicted RBP0.52□□□□□ -2.33
NUP188YML103C BSC4P53841 131 aa0.52□□□□□ -2.33
NUP188YML103C GSC2P40989 1895 aa0.51□□□□□ -2.33
NUP188YML103C TY1B-HO13535 1793 aa0.51□□□□□ -2.33
NUP188YML103C NTE1Q04958 1679 aa0.51□□□□□ -2.33
NUP188YML103C COX7P10174 60 aa0.51□□□□□ -2.33
NUP188YML103C YNR034W-AQ3E841 98 aa0.51□□□□□ -2.33
NUP188YML103C SWR1Q05471 1514 aa0.51□□□□□ -2.33
NUP188YML103C YNL198CP40166 100 aa0.51□□□□□ -2.33
NUP188YML103C RPS29BP41058 56 aaKnown RBP0.51□□□□□ -2.33
NUP188YML103C YBR056W-AI2HB52 66 aa0.5□□□□□ -2.33
NUP188YML103C FPR2P32472 135 aa0.5□□□□□ -2.33
NUP188YML103C SPC1P46965 94 aa0.5□□□□□ -2.33
NUP188YML103C YOL164W-AQ3E7A5 60 aa0.5□□□□□ -2.33
NUP188YML103C HFA1P32874 2273 aa0.5□□□□□ -2.33
NUP188YML103C YNL042W-BQ3E7Z2 85 aa0.5□□□□□ -2.33
NUP188YML103C YDR210WQ03482 75 aa0.5□□□□□ -2.33
NUP188YML103C BPT1P14772 1559 aa0.5□□□□□ -2.33
NUP188YML103C YDR042CQ03205 200 aa0.49□□□□□ -2.33
NUP188YML103C SCP1Q08873 200 aa0.49□□□□□ -2.33
NUP188YML103C YOR343CQ12484 108 aa0.49□□□□□ -2.33
NUP188YML103C DYN1P36022 4092 aa0.49□□□□□ -2.33
NUP188YML103C TY4B-HP0C2J7 1802 aa0.49□□□□□ -2.33
NUP188YML103C YCR075W-AQ3E830 75 aa0.49□□□□□ -2.33
NUP188YML103C SDH6Q3E785 79 aa0.49□□□□□ -2.33
NUP188YML103C YOL097W-AQ3E7Y9 61 aa0.48□□□□□ -2.33
NUP188YML103C Q0032Q9ZZX7 96 aa0.48□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms