RNA–Protein interactions for RNA: YKL122C

SRP21, Transcript of Subunit of the signal recognition particle (SRP), yeast

Gene SRP21, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP21	YKL122C	YCR101C	P25607	182 aa		0.74	□□□□□ -2.29
SRP21	YKL122C	SRB6	P32570	121 aa		0.74	□□□□□ -2.29
SRP21	YKL122C	PAU16	P35994	123 aa		0.74	□□□□□ -2.29
SRP21	YKL122C	PAU15	P40585	124 aa		0.74	□□□□□ -2.29
SRP21	YKL122C	YLR307C-A	Q3E825	87 aa		0.74	□□□□□ -2.29
SRP21	YKL122C	GEA1	P47102	1408 aa	Predicted RBP	0.73	□□□□□ -2.29
SRP21	YKL122C	YLR157W-E	P0CF00	54 aa		0.73	□□□□□ -2.29
SRP21	YKL122C	YOL118C	Q08259	102 aa		0.73	□□□□□ -2.29
SRP21	YKL122C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.73	□□□□□ -2.29
SRP21	YKL122C	KRE5	P22023	1365 aa		0.72	□□□□□ -2.29
SRP21	YKL122C	FAS2	P19097	1887 aa	Known RBP	0.72	□□□□□ -2.29
SRP21	YKL122C	CCW14	O13547	238 aa		0.72	□□□□□ -2.29
SRP21	YKL122C	IMP2	P46972	177 aa		0.72	□□□□□ -2.29
SRP21	YKL122C	FYV7	Q12247	151 aa		0.72	□□□□□ -2.29
SRP21	YKL122C	URA2	P07259	2214 aa	Known RBP	0.72	□□□□□ -2.29
SRP21	YKL122C	BPT1	P14772	1559 aa		0.71	□□□□□ -2.3
SRP21	YKL122C	PDR11	P40550	1411 aa		0.71	□□□□□ -2.3
SRP21	YKL122C	YRF1-1	P0CX20	1796 aa		0.7	□□□□□ -2.3
SRP21	YKL122C	YRF1-5	P0CX21	1796 aa		0.7	□□□□□ -2.3
SRP21	YKL122C	YRF1-8	P0CX22	1796 aa		0.7	□□□□□ -2.3
SRP21	YKL122C	BRR2	P32639	2163 aa	Known RBP	0.7	□□□□□ -2.3
SRP21	YKL122C	GEA2	P39993	1459 aa	Known RBP	0.7	□□□□□ -2.3
SRP21	YKL122C	MIX14	Q04341	121 aa		0.7	□□□□□ -2.3
SRP21	YKL122C	YIL086C	P40503	102 aa		0.69	□□□□□ -2.3
SRP21	YKL122C	YDR210W	Q03482	75 aa		0.69	□□□□□ -2.3
SRP21	YKL122C	KSH1	Q8TGJ3	72 aa		0.69	□□□□□ -2.3
SRP21	YKL122C	NTE1	Q04958	1679 aa		0.69	□□□□□ -2.3
SRP21	YKL122C	YLR255C	O13574	117 aa		0.68	□□□□□ -2.3
SRP21	YKL122C	TOP2	P06786	1428 aa	Known RBP	0.68	□□□□□ -2.3
SRP21	YKL122C	BUD4	P47136	1447 aa		0.68	□□□□□ -2.3
SRP21	YKL122C	COX12	Q01519	83 aa		0.68	□□□□□ -2.3
SRP21	YKL122C	COX19	Q3E731	98 aa		0.68	□□□□□ -2.3
SRP21	YKL122C	YPL038W-A	Q3E7B4	63 aa		0.68	□□□□□ -2.3
SRP21	YKL122C	BLM10	P43583	2143 aa		0.67	□□□□□ -2.3
SRP21	YKL122C	SHU1	P38751	150 aa		0.67	□□□□□ -2.3
SRP21	YKL122C	YDR010C	Q12426	110 aa		0.67	□□□□□ -2.3
SRP21	YKL122C	YCR095W-A	Q3E787	52 aa		0.67	□□□□□ -2.3
SRP21	YKL122C	YBR072C-A	Q3E794	53 aa		0.67	□□□□□ -2.3
SRP21	YKL122C	REV3	P14284	1504 aa		0.67	□□□□□ -2.3
SRP21	YKL122C	POL2	P21951	2222 aa	Known RBP	0.66	□□□□□ -2.3
SRP21	YKL122C	RPA190	P10964	1664 aa	Known RBP	0.66	□□□□□ -2.3
SRP21	YKL122C	SRB8	P25648	1427 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	CAT8	P39113	1433 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	RIM15	P43565	1770 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	AUA1	P32450	94 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	YHL005C	P38752	130 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	MPC2	P38857	129 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	YHR173C	P38864	112 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	GCV3	P39726	170 aa	Predicted RBP	0.66	□□□□□ -2.3
SRP21	YKL122C	RSM19	P53733	91 aa	Predicted RBP	0.66	□□□□□ -2.3
SRP21	YKL122C	ZEO1	Q08245	113 aa		0.66	□□□□□ -2.3
SRP21	YKL122C	YPL225W	Q08971	146 aa	Known RBP	0.66	□□□□□ -2.3
SRP21	YKL122C	ROX3	P25046	220 aa		0.65	□□□□□ -2.31
SRP21	YKL122C	PAU5	P43575	122 aa		0.65	□□□□□ -2.31
SRP21	YKL122C	SNA2	P56508	79 aa		0.65	□□□□□ -2.31
SRP21	YKL122C	TY1B-BL	Q12490	1755 aa		0.65	□□□□□ -2.31
SRP21	YKL122C	SNF2	P22082	1703 aa		0.64	□□□□□ -2.31
SRP21	YKL122C	MRP17	P28778	131 aa		0.64	□□□□□ -2.31
SRP21	YKL122C	EMC5	P40540	141 aa		0.64	□□□□□ -2.31
SRP21	YKL122C	YOR289W	Q12012	251 aa	Predicted RBP	0.64	□□□□□ -2.31
SRP21	YKL122C	YRF1-2	P40105	1681 aa		0.64	□□□□□ -2.31
SRP21	YKL122C	HMRA1	P0CY11	126 aa		0.63	□□□□□ -2.31
SRP21	YKL122C	MRX7	P53869	86 aa		0.63	□□□□□ -2.31
SRP21	YKL122C	PAU6	P0CE90	120 aa		0.62	□□□□□ -2.31
SRP21	YKL122C	PAU18	P0CE91	120 aa		0.62	□□□□□ -2.31
SRP21	YKL122C	ICY1	Q04329	127 aa		0.62	□□□□□ -2.31
SRP21	YKL122C	TY1B-BR	Q12193	1756 aa		0.62	□□□□□ -2.31
SRP21	YKL122C	MRPL38	P35996	138 aa	Predicted RBP	0.61	□□□□□ -2.31
SRP21	YKL122C	YBR292C	P38357	123 aa		0.61	□□□□□ -2.31
SRP21	YKL122C	MSL1	P40567	111 aa	Predicted RBP	0.61	□□□□□ -2.31
SRP21	YKL122C	PRP8	P33334	2413 aa	Known RBP	0.61	□□□□□ -2.31
SRP21	YKL122C	SSN2	P38931	1420 aa		0.61	□□□□□ -2.31
SRP21	YKL122C	RSF2	P46974	1380 aa		0.6	□□□□□ -2.31
SRP21	YKL122C	RPS11A	P0CX47	156 aa	Known RBP	0.6	□□□□□ -2.31
SRP21	YKL122C	RPS11B	P0CX48	156 aa	Known RBP	0.6	□□□□□ -2.31
SRP21	YKL122C	YBL071C	P38185	102 aa		0.6	□□□□□ -2.31
SRP21	YKL122C	AIM19	P40502	157 aa		0.6	□□□□□ -2.31
SRP21	YKL122C	PAU20	Q08322	120 aa		0.6	□□□□□ -2.31
SRP21	YKL122C	YNR034W-A	Q3E841	98 aa		0.6	□□□□□ -2.31
SRP21	YKL122C	YOL164W-A	Q3E7A5	60 aa		0.59	□□□□□ -2.31
SRP21	YKL122C	RRT15	Q3E811	62 aa		0.59	□□□□□ -2.31
SRP21	YKL122C	PAU1	P0CE88	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	PAU14	P0CE89	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	PAU8	P0CE92	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	PAU11	P0CE93	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	PAU13	P38725	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	RPS29B	P41058	56 aa	Known RBP	0.58	□□□□□ -2.32
SRP21	YKL122C	PAU10	Q03050	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	NHP10	Q03435	203 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	PAU9	Q3E770	120 aa		0.58	□□□□□ -2.32
SRP21	YKL122C	SNU13	P39990	126 aa	Known RBP	0.57	□□□□□ -2.32
SRP21	YKL122C	RSM18	P40033	138 aa		0.57	□□□□□ -2.32
SRP21	YKL122C	SPC1	P46965	94 aa		0.57	□□□□□ -2.32
SRP21	YKL122C	SUS1	Q6WNK7	96 aa		0.57	□□□□□ -2.32
SRP21	YKL122C	TY1B-PR2	P0C2J0	1756 aa		0.56	□□□□□ -2.32
SRP21	YKL122C	PAU4	P53427	120 aa		0.56	□□□□□ -2.32
SRP21	YKL122C	PDR10	P51533	1564 aa		0.56	□□□□□ -2.32
SRP21	YKL122C	MOT1	P32333	1867 aa		0.56	□□□□□ -2.32
SRP21	YKL122C	ECM29	P38737	1868 aa		0.56	□□□□□ -2.32
SRP21	YKL122C	YDR042C	Q03205	200 aa		0.55	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms