RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W YLR042CQ07990 161 aa2.86□□□□□ -1.95
DEG1YFL001W RPL13AQ12690 199 aaPredicted RBP2.86□□□□□ -1.95
DEG1YFL001W FLO9P39712 1322 aa2.85□□□□□ -1.95
DEG1YFL001W PRP8P33334 2413 aaKnown RBP2.85□□□□□ -1.95
DEG1YFL001W GEP7P53171 287 aa2.85□□□□□ -1.95
DEG1YFL001W AHT1P29589 182 aa2.84□□□□□ -1.96
DEG1YFL001W RPL14AP36105 138 aaKnown RBP2.84□□□□□ -1.96
DEG1YFL001W SFT2P38166 215 aa2.84□□□□□ -1.96
DEG1YFL001W YPL067CQ02754 198 aa2.84□□□□□ -1.96
DEG1YFL001W YHP1Q04116 353 aa2.84□□□□□ -1.96
DEG1YFL001W YMR090WQ04304 227 aaKnown RBP2.84□□□□□ -1.96
DEG1YFL001W FIT1Q04433 528 aa2.84□□□□□ -1.96
DEG1YFL001W FIT2Q08906 153 aa2.84□□□□□ -1.96
DEG1YFL001W ATG41Q12048 136 aa2.84□□□□□ -1.96
DEG1YFL001W YOR097CQ12274 175 aaPredicted RBP2.84□□□□□ -1.96
DEG1YFL001W YOR343CQ12484 108 aa2.84□□□□□ -1.96
DEG1YFL001W YKR070WP36151 352 aaKnown RBP2.83□□□□□ -1.96
DEG1YFL001W YJL218WP40892 196 aaKnown RBP2.83□□□□□ -1.96
DEG1YFL001W SPG1P50088 95 aa2.83□□□□□ -1.96
DEG1YFL001W YNR064CP53750 290 aa2.83□□□□□ -1.96
DEG1YFL001W UPS3Q04006 179 aa2.83□□□□□ -1.96
DEG1YFL001W YHR007C-AQ07074 71 aa2.83□□□□□ -1.96
DEG1YFL001W IRA1P18963 3092 aa2.82□□□□□ -1.96
DEG1YFL001W HAP3P13434 144 aa2.82□□□□□ -1.96
DEG1YFL001W YBR219CP38317 127 aa2.82□□□□□ -1.96
DEG1YFL001W PHS1P40857 217 aa2.82□□□□□ -1.96
DEG1YFL001W YMR103CQ04436 120 aa2.82□□□□□ -1.96
DEG1YFL001W YLR162WQ06235 118 aa2.82□□□□□ -1.96
DEG1YFL001W CUP1-1P0CX80 61 aa2.81□□□□□ -1.96
DEG1YFL001W CUP1-2P0CX81 61 aa2.81□□□□□ -1.96
DEG1YFL001W HSP12P22943 109 aaKnown RBP2.81□□□□□ -1.96
DEG1YFL001W MRPL11P36521 249 aaPredicted RBP2.81□□□□□ -1.96
DEG1YFL001W PAM16P42949 149 aa2.81□□□□□ -1.96
DEG1YFL001W PAU12P53343 120 aa2.81□□□□□ -1.96
DEG1YFL001W RCE1Q03530 315 aa2.81□□□□□ -1.96
DEG1YFL001W MEC1P38111 2368 aa2.81□□□□□ -1.96
DEG1YFL001W COX9P07255 59 aa2.8□□□□□ -1.96
DEG1YFL001W EMP24P32803 203 aaKnown RBP2.8□□□□□ -1.96
DEG1YFL001W PAU24P38155 120 aa2.8□□□□□ -1.96
DEG1YFL001W YAR029WP39549 74 aa2.8□□□□□ -1.96
DEG1YFL001W HPA3P39979 161 aa2.8□□□□□ -1.96
DEG1YFL001W EST3Q03096 181 aa2.8□□□□□ -1.96
DEG1YFL001W RAF1Q06891 181 aa2.8□□□□□ -1.96
DEG1YFL001W RRT7Q07829 113 aa2.8□□□□□ -1.96
DEG1YFL001W MRS4P23500 304 aa2.79□□□□□ -1.96
DEG1YFL001W YGL010WP25338 174 aa2.79□□□□□ -1.96
DEG1YFL001W GAT4P40569 121 aa2.79□□□□□ -1.96
DEG1YFL001W ECM12O13529 151 aa2.78□□□□□ -1.96
DEG1YFL001W PAU2P32612 120 aa2.78□□□□□ -1.96
DEG1YFL001W TRS20P38334 175 aa2.78□□□□□ -1.96
DEG1YFL001W CCS1P40202 249 aaKnown RBP2.78□□□□□ -1.96
DEG1YFL001W SWM2P40342 146 aa2.78□□□□□ -1.96
DEG1YFL001W YML079WQ03629 201 aa2.78□□□□□ -1.96
DEG1YFL001W FIT3Q08907 204 aa2.78□□□□□ -1.96
DEG1YFL001W YDR029WQ12111 104 aa2.78□□□□□ -1.96
DEG1YFL001W COA6Q3E846 104 aa2.78□□□□□ -1.96
DEG1YFL001W SUS1Q6WNK7 96 aa2.78□□□□□ -1.96
DEG1YFL001W NUM1Q00402 2748 aa2.78□□□□□ -1.96
DEG1YFL001W HMRA1P0CY11 126 aa2.77□□□□□ -1.97
DEG1YFL001W INO4P13902 151 aa2.77□□□□□ -1.97
DEG1YFL001W FUN14P18411 198 aa2.77□□□□□ -1.97
DEG1YFL001W DDR48P18899 430 aaKnown RBP2.77□□□□□ -1.97
DEG1YFL001W YMR252CQ04814 134 aa2.77□□□□□ -1.97
DEG1YFL001W CSI2Q08054 341 aa2.77□□□□□ -1.97
DEG1YFL001W BLM10P43583 2143 aa2.77□□□□□ -1.97
DEG1YFL001W YBR056W-AI2HB52 66 aa2.76□□□□□ -1.97
DEG1YFL001W PAI3P01094 68 aa2.76□□□□□ -1.97
DEG1YFL001W RPB7P34087 171 aa2.76□□□□□ -1.97
DEG1YFL001W SSS1P35179 80 aa2.76□□□□□ -1.97
DEG1YFL001W LSM2P38203 95 aaKnown RBP2.76□□□□□ -1.97
DEG1YFL001W YEL067CP39978 195 aa2.76□□□□□ -1.97
DEG1YFL001W FLX1P40464 311 aa2.76□□□□□ -1.97
DEG1YFL001W SIP18P50263 79 aa2.76□□□□□ -1.97
DEG1YFL001W YMR082CQ04276 118 aa2.76□□□□□ -1.97
DEG1YFL001W RPL43AP0CX25 92 aaKnown RBP2.75□□□□□ -1.97
DEG1YFL001W RPL43BP0CX26 92 aa2.75□□□□□ -1.97
DEG1YFL001W YHL037CP38733 133 aa2.75□□□□□ -1.97
DEG1YFL001W MSL1P40567 111 aaPredicted RBP2.75□□□□□ -1.97
DEG1YFL001W ATP19P81451 68 aa2.75□□□□□ -1.97
DEG1YFL001W NMA1Q06178 401 aaKnown RBP2.75□□□□□ -1.97
DEG1YFL001W YBR013CP38215 129 aa2.74□□□□□ -1.97
DEG1YFL001W CYB5P40312 120 aa2.74□□□□□ -1.97
DEG1YFL001W YGR269WP40326 108 aa2.74□□□□□ -1.97
DEG1YFL001W YDL241WQ07738 123 aa2.74□□□□□ -1.97
DEG1YFL001W SEC16P48415 2195 aaKnown RBP2.74□□□□□ -1.97
DEG1YFL001W UBC4P15731 148 aa2.73□□□□□ -1.97
DEG1YFL001W YCR050CP25630 102 aa2.73□□□□□ -1.97
DEG1YFL001W SNN1P48232 102 aa2.73□□□□□ -1.97
DEG1YFL001W YOS1Q3E834 85 aa2.73□□□□□ -1.97
DEG1YFL001W KSH1Q8TGJ3 72 aa2.73□□□□□ -1.97
DEG1YFL001W TDA2P40045 126 aa2.72□□□□□ -1.97
DEG1YFL001W EMC5P40540 141 aa2.72□□□□□ -1.97
DEG1YFL001W VMA21P41806 77 aa2.72□□□□□ -1.97
DEG1YFL001W YFL065CP43539 102 aa2.72□□□□□ -1.97
DEG1YFL001W YFL051CP43552 160 aa2.72□□□□□ -1.97
DEG1YFL001W RSM19P53733 91 aaPredicted RBP2.72□□□□□ -1.97
DEG1YFL001W YPR203WQ08994 102 aa2.72□□□□□ -1.97
DEG1YFL001W QCR8P08525 94 aa2.71□□□□□ -1.98
DEG1YFL001W SNF11P38956 169 aa2.71□□□□□ -1.98
DEG1YFL001W GPI19Q04082 140 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 63.4 ms