Protein–RNA interactions for Protein: P40045

TDA2, Topoisomerase I damage affected protein 2, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA2P40045 NSR1YGR159C 1245 nt12.67□□□□□ -0.38
TDA2P40045 YML009W-BYML009W-B 477 nt12.13□□□□□ -0.47
TDA2P40045 MDJ1YFL016C 1536 nt11.68□□□□□ -0.54
TDA2P40045 NOP1YDL014W 984 nt11.67□□□□□ -0.54
TDA2P40045 YJL027CYJL027C 417 nt10.82□□□□□ -0.68
TDA2P40045 SSA3YBL075C 1950 nt10.56□□□□□ -0.72
TDA2P40045 YBR190WYBR190W 312 nt10.25□□□□□ -0.77
TDA2P40045 SRX1YKL086W 384 nt10.14□□□□□ -0.79
TDA2P40045 YKL036CYKL036C 393 nt10.13□□□□□ -0.79
TDA2P40045 DBP2YNL112W 1641 nt10.1□□□□□ -0.79
TDA2P40045 Q0297Q0297 156 nt9.98□□□□□ -0.81
TDA2P40045 RTC3YHR087W 336 nt9.91□□□□□ -0.82
TDA2P40045 RDN37-1RDN37-1 5354 nt9.74□□□□□ -0.85
TDA2P40045 RDN37-2RDN37-2 5354 nt9.74□□□□□ -0.85
TDA2P40045 PUT4YOR348C 1884 nt9.7□□□□□ -0.86
TDA2P40045 YJL225CYJL225C 5277 nt9.69□□□□□ -0.86
TDA2P40045 TRN1tP(UGG)A 72 nt9.51□□□□□ -0.89
TDA2P40045 SUF9tP(UGG)F 72 nt9.51□□□□□ -0.89
TDA2P40045 SUF8tP(UGG)H 72 nt9.51□□□□□ -0.89
TDA2P40045 tP(UGG)LtP(UGG)L 72 nt9.51□□□□□ -0.89
TDA2P40045 SUF7tP(UGG)M 72 nt9.51□□□□□ -0.89
TDA2P40045 tP(UGG)N1tP(UGG)N1 72 nt9.51□□□□□ -0.89
TDA2P40045 tP(UGG)N2tP(UGG)N2 72 nt9.51□□□□□ -0.89
TDA2P40045 tP(UGG)O1tP(UGG)O1 72 nt9.51□□□□□ -0.89
TDA2P40045 SUF11tP(UGG)O2 72 nt9.51□□□□□ -0.89
TDA2P40045 RVS167YDR388W 1449 nt9.5□□□□□ -0.89
TDA2P40045 YCR051WYCR051W 669 nt9.5□□□□□ -0.89
TDA2P40045 ARE1YCR048W 1833 nt9.32□□□□□ -0.92
TDA2P40045 CCC1YLR220W 969 nt9.3□□□□□ -0.92
TDA2P40045 POA1YBR022W 534 nt9.29□□□□□ -0.92
TDA2P40045 SPT5YML010W 3192 nt9.28□□□□□ -0.92
TDA2P40045 SSA4YER103W 1929 nt9.27□□□□□ -0.93
TDA2P40045 BSC6YOL137W 1494 nt9.26□□□□□ -0.93
TDA2P40045 YHR049C-AYHR049C-A 297 nt9.22□□□□□ -0.93
TDA2P40045 SCJ1YMR214W 1134 nt9.18□□□□□ -0.94
TDA2P40045 SAH1YER043C 1350 nt9.11□□□□□ -0.95
TDA2P40045 OPI9YLR338W 858 nt9.1□□□□□ -0.95
TDA2P40045 URN1YPR152C 1398 nt9.06□□□□□ -0.96
TDA2P40045 SSA1YAL005C 1929 nt9.03□□□□□ -0.96
TDA2P40045 FPS1YLL043W 2010 nt9.02□□□□□ -0.97
TDA2P40045 NVJ2YPR091C 2313 nt9.01□□□□□ -0.97
TDA2P40045 SHR5YOL110W 714 nt9□□□□□ -0.97
TDA2P40045 BDF1YLR399C 2061 nt8.97□□□□□ -0.97
TDA2P40045 PAC11YDR488C 1602 nt8.94□□□□□ -0.98
TDA2P40045 RPP1BYDL130W 321 nt8.93□□□□□ -0.98
TDA2P40045 BUD23YCR047C 828 nt8.92□□□□□ -0.98
TDA2P40045 RPN10YHR200W 807 nt8.92□□□□□ -0.98
TDA2P40045 TAT1YBR069C 1860 nt8.88□□□□□ -0.99
TDA2P40045 PUN1YLR414C 792 nt8.88□□□□□ -0.99
TDA2P40045 SCS3YGL126W 1143 nt8.85□□□□□ -0.99
TDA2P40045 YOL085CYOL085C 342 nt8.83□□□□□ -1
TDA2P40045 NAB2YGL122C 1578 nt8.82□□□□□ -1
TDA2P40045 DEP1YAL013W 1218 nt8.79□□□□□ -1
TDA2P40045 MEP2YNL142W 1500 nt8.79□□□□□ -1
TDA2P40045 PTC2YER089C 1395 nt8.77□□□□□ -1.01
TDA2P40045 tP(UGG)O3tP(UGG)O3 72 nt8.77□□□□□ -1.01
TDA2P40045 YNL208WYNL208W 600 nt8.73□□□□□ -1.01
TDA2P40045 YJR018WYJR018W 363 nt8.63□□□□□ -1.03
TDA2P40045 FIS1YIL065C 468 nt8.59□□□□□ -1.03
TDA2P40045 YMR090WYMR090W 684 nt8.59□□□□□ -1.03
TDA2P40045 PKP1YIL042C 1185 nt8.58□□□□□ -1.04
TDA2P40045 DAL1YIR027C 1383 nt8.58□□□□□ -1.04
TDA2P40045 YDJ1YNL064C 1230 nt8.57□□□□□ -1.04
TDA2P40045 PET122YER153C 765 nt8.54□□□□□ -1.04
TDA2P40045 DCW1YKL046C 1350 nt8.53□□□□□ -1.04
TDA2P40045 YBR220CYBR220C 1683 nt8.53□□□□□ -1.04
TDA2P40045 YPS1YLR120C 1710 nt8.52□□□□□ -1.05
TDA2P40045 EMI2YDR516C 1503 nt8.48□□□□□ -1.05
TDA2P40045 PHO4YFR034C 939 nt8.47□□□□□ -1.05
TDA2P40045 INM2YDR287W 879 nt8.46□□□□□ -1.06
TDA2P40045 YHR165W-AYHR165W-A 312 nt8.45□□□□□ -1.06
TDA2P40045 SEC11YIR022W 504 nt8.45□□□□□ -1.06
TDA2P40045 FPR4YLR449W 1179 nt8.44□□□□□ -1.06
TDA2P40045 PCH2YBR186W 1695 nt8.41□□□□□ -1.06
TDA2P40045 YDR095CYDR095C 411 nt8.4□□□□□ -1.06
TDA2P40045 SDH1YKL148C 1923 nt8.4□□□□□ -1.06
TDA2P40045 YDL221WYDL221W 552 nt8.39□□□□□ -1.07
TDA2P40045 SCR1SCR1 522 nt8.39□□□□□ -1.07
TDA2P40045 GUT2YIL155C 1950 nt8.37□□□□□ -1.07
TDA2P40045 RPP2BYDR382W 333 nt8.36□□□□□ -1.07
TDA2P40045 GAR1YHR089C 618 nt8.35□□□□□ -1.07
TDA2P40045 YJR120WYJR120W 351 nt8.29□□□□□ -1.08
TDA2P40045 SCC4YER147C 1875 nt8.25□□□□□ -1.09
TDA2P40045 UME6YDR207C 2511 nt8.23□□□□□ -1.09
TDA2P40045 YBL100CYBL100C 315 nt8.23□□□□□ -1.09
TDA2P40045 RPP2AYOL039W 321 nt8.23□□□□□ -1.09
TDA2P40045 RRN5YLR141W 1092 nt8.21□□□□□ -1.1
TDA2P40045 PTP1YDL230W 1008 nt8.19□□□□□ -1.1
TDA2P40045 CAC2YML102W 1407 nt8.19□□□□□ -1.1
TDA2P40045 PIB2YGL023C 1908 nt8.17□□□□□ -1.1
TDA2P40045 TIR1YER011W 765 nt8.15□□□□□ -1.1
TDA2P40045 ALF1YNL148C 765 nt8.14□□□□□ -1.11
TDA2P40045 RTF1YGL244W 1677 nt8.14□□□□□ -1.11
TDA2P40045 IRC15YPL017C 1500 nt8.1□□□□□ -1.11
TDA2P40045 FUN26YAL022C 1554 nt8.1□□□□□ -1.11
TDA2P40045 YSC84YHR016C 1407 nt8.09□□□□□ -1.11
TDA2P40045 RPM1RPM1 483 nt8.08□□□□□ -1.12
TDA2P40045 BOP3YNL042W 1191 nt8.08□□□□□ -1.12
TDA2P40045 GIS3YLR094C 1509 nt8.07□□□□□ -1.12
TDA2P40045 YER088W-BYER088W-B 147 nt8.06□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms