RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MRPL38P35996 138 aaPredicted RBP-0.53□□□□□ -2.49
SNU56YDR240C PAU15P40585 124 aa-0.53□□□□□ -2.49
SNU56YDR240C UTP20P35194 2493 aaKnown RBP-0.53□□□□□ -2.49
SNU56YDR240C MRP49P32388 137 aa-0.54□□□□□ -2.5
SNU56YDR240C PAU16P35994 123 aa-0.54□□□□□ -2.5
SNU56YDR240C RPB11P38902 120 aa-0.54□□□□□ -2.5
SNU56YDR240C YAR029WP39549 74 aa-0.54□□□□□ -2.5
SNU56YDR240C GTT1P40582 234 aa-0.54□□□□□ -2.5
SNU56YDR240C YGL204CP53089 101 aa-0.54□□□□□ -2.5
SNU56YDR240C YIL134C-AQ45U18 67 aa-0.54□□□□□ -2.5
SNU56YDR240C YLR365WQ7LIF2 110 aa-0.54□□□□□ -2.5
SNU56YDR240C YRF1-2P40105 1681 aa-0.54□□□□□ -2.5
SNU56YDR240C QCR6P00127 147 aa-0.54□□□□□ -2.5
SNU56YDR240C AIM11P87275 137 aa-0.54□□□□□ -2.5
SNU56YDR240C NKP2Q06162 153 aa-0.54□□□□□ -2.5
SNU56YDR240C YLR118CQ12354 227 aa-0.54□□□□□ -2.5
SNU56YDR240C YLR099W-AQ3E798 87 aa-0.54□□□□□ -2.5
SNU56YDR240C TY1B-BLQ12490 1755 aa-0.55□□□□□ -2.5
SNU56YDR240C YLR419WQ06698 1435 aaKnown RBP-0.55□□□□□ -2.5
SNU56YDR240C YHR138CP38841 114 aaPredicted RBP-0.55□□□□□ -2.5
SNU56YDR240C MRX7P53869 86 aa-0.55□□□□□ -2.5
SNU56YDR240C ICY1Q04329 127 aa-0.55□□□□□ -2.5
SNU56YDR240C SSN2P38931 1420 aa-0.56□□□□□ -2.5
SNU56YDR240C YJR107C-AP0CT86 78 aa-0.56□□□□□ -2.5
SNU56YDR240C BUD23P25627 275 aaPredicted RBP-0.56□□□□□ -2.5
SNU56YDR240C RSM18P40033 138 aa-0.56□□□□□ -2.5
SNU56YDR240C COX12Q01519 83 aa-0.56□□□□□ -2.5
SNU56YDR240C DYN2Q02647 92 aa-0.56□□□□□ -2.5
SNU56YDR240C YIR021W-AQ3E739 70 aa-0.56□□□□□ -2.5
SNU56YDR240C YLR042CQ07990 161 aa-0.57□□□□□ -2.5
SNU56YDR240C YCR108CQ3E819 63 aa-0.57□□□□□ -2.5
SNU56YDR240C YNR034W-AQ3E841 98 aa-0.58□□□□□ -2.5
SNU56YDR240C PAU6P0CE90 120 aa-0.59□□□□□ -2.5
SNU56YDR240C PAU18P0CE91 120 aa-0.59□□□□□ -2.5
SNU56YDR240C YBR292CP38357 123 aa-0.59□□□□□ -2.5
SNU56YDR240C HUR1P45820 110 aa-0.59□□□□□ -2.5
SNU56YDR240C SRB8P25648 1427 aa-0.59□□□□□ -2.5
SNU56YDR240C VMA7P39111 118 aa-0.6□□□□□ -2.5
SNU56YDR240C YCR095W-AQ3E787 52 aa-0.6□□□□□ -2.5
SNU56YDR240C SRB6P32570 121 aa-0.61□□□□□ -2.51
SNU56YDR240C PAU20Q08322 120 aa-0.61□□□□□ -2.51
SNU56YDR240C ROX3P25046 220 aa-0.61□□□□□ -2.51
SNU56YDR240C PDX3P38075 228 aaKnown RBP-0.61□□□□□ -2.51
SNU56YDR240C PAU5P43575 122 aa-0.61□□□□□ -2.51
SNU56YDR240C RPL38P49167 78 aaKnown RBP-0.61□□□□□ -2.51
SNU56YDR240C SNA2P56508 79 aa-0.61□□□□□ -2.51
SNU56YDR240C RTR2Q12378 196 aa-0.62□□□□□ -2.51
SNU56YDR240C MRP17P28778 131 aa-0.63□□□□□ -2.51
SNU56YDR240C YBL071CP38185 102 aa-0.63□□□□□ -2.51
SNU56YDR240C VMA21P41806 77 aa-0.63□□□□□ -2.51
SNU56YDR240C SPC2Q04969 178 aa-0.63□□□□□ -2.51
SNU56YDR240C MIC10Q96VH5 97 aa-0.63□□□□□ -2.51
SNU56YDR240C KRE5P22023 1365 aa-0.63□□□□□ -2.51
SNU56YDR240C BUD4P47136 1447 aa-0.63□□□□□ -2.51
SNU56YDR240C NTE1Q04958 1679 aa-0.64□□□□□ -2.51
SNU56YDR240C APS2Q00381 147 aa-0.64□□□□□ -2.51
SNU56YDR240C YDR381C-AQ3E6R5 114 aa-0.64□□□□□ -2.51
SNU56YDR240C BPT1P14772 1559 aa-0.64□□□□□ -2.51
SNU56YDR240C YRF1-1P0CX20 1796 aa-0.65□□□□□ -2.51
SNU56YDR240C YRF1-5P0CX21 1796 aa-0.65□□□□□ -2.51
SNU56YDR240C YRF1-8P0CX22 1796 aa-0.65□□□□□ -2.51
SNU56YDR240C SWC7Q06707 132 aa-0.65□□□□□ -2.51
SNU56YDR240C SEN1Q00416 2231 aaKnown RBP-0.65□□□□□ -2.51
SNU56YDR240C LYS2P07702 1392 aa-0.65□□□□□ -2.51
SNU56YDR240C TY1B-LR3P0C2I6 1755 aaKnown RBP-0.65□□□□□ -2.51
SNU56YDR240C TY1B-PR3P0C2J1 1755 aaKnown RBP-0.65□□□□□ -2.51
SNU56YDR240C PAU1P0CE88 120 aa-0.66□□□□□ -2.51
SNU56YDR240C PAU14P0CE89 120 aa-0.66□□□□□ -2.51
SNU56YDR240C PAU8P0CE92 120 aa-0.66□□□□□ -2.51
SNU56YDR240C PAU11P0CE93 120 aa-0.66□□□□□ -2.51
SNU56YDR240C PAU13P38725 120 aa-0.66□□□□□ -2.51
SNU56YDR240C PAU10Q03050 120 aa-0.66□□□□□ -2.51
SNU56YDR240C PAU9Q3E770 120 aa-0.66□□□□□ -2.51
SNU56YDR240C Q0032Q9ZZX7 96 aa-0.66□□□□□ -2.51
SNU56YDR240C YER039C-AP0CD97 72 aa-0.67□□□□□ -2.52
SNU56YDR240C COX7P10174 60 aa-0.67□□□□□ -2.52
SNU56YDR240C YGR025WP53216 100 aa-0.67□□□□□ -2.52
SNU56YDR240C MIX14Q04341 121 aa-0.67□□□□□ -2.52
SNU56YDR240C YDR246W-AQ3E763 66 aa-0.67□□□□□ -2.52
SNU56YDR240C YNL042W-BQ3E7Z2 85 aa-0.67□□□□□ -2.52
SNU56YDR240C YOS1Q3E834 85 aa-0.67□□□□□ -2.52
SNU56YDR240C AIM19P40502 157 aa-0.67□□□□□ -2.52
SNU56YDR240C WIP1Q2V2P8 89 aa-0.67□□□□□ -2.52
SNU56YDR240C PMD1P32634 1753 aa-0.68□□□□□ -2.52
SNU56YDR240C SPC1P46965 94 aa-0.68□□□□□ -2.52
SNU56YDR240C PAU4P53427 120 aa-0.68□□□□□ -2.52
SNU56YDR240C YBR201C-AQ2V2Q3 67 aa-0.68□□□□□ -2.52
SNU56YDR240C UBC4P15731 148 aa-0.69□□□□□ -2.52
SNU56YDR240C RPS29AP41057 56 aaKnown RBP-0.69□□□□□ -2.52
SNU56YDR240C NHP10Q03435 203 aa-0.69□□□□□ -2.52
SNU56YDR240C HKR1P41809 1802 aa-0.69□□□□□ -2.52
SNU56YDR240C DNF3Q12674 1656 aa-0.7□□□□□ -2.52
SNU56YDR240C RSM19P53733 91 aaPredicted RBP-0.7□□□□□ -2.52
SNU56YDR240C TY1B-BRQ12193 1756 aa-0.71□□□□□ -2.52
SNU56YDR240C UBC5P15732 148 aa-0.71□□□□□ -2.52
SNU56YDR240C YMR103CQ04436 120 aa-0.71□□□□□ -2.52
SNU56YDR240C SPP41P38904 1435 aa-0.71□□□□□ -2.52
SNU56YDR240C GNA1P43577 159 aaPredicted RBP-0.72□□□□□ -2.52
SNU56YDR240C TY3B-IQ7LHG5 1498 aaKnown RBP-0.72□□□□□ -2.53
SNU56YDR240C YBL044WP38194 122 aa-0.73□□□□□ -2.53
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms