RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C FYV4P38783 130 aaPredicted RBP1.57□□□□□ -2.16
RPC40YPR110C UBC7Q02159 165 aa1.57□□□□□ -2.16
RPC40YPR110C RCE1Q03530 315 aa1.57□□□□□ -2.16
RPC40YPR110C AIM36Q03798 255 aa1.57□□□□□ -2.16
RPC40YPR110C NMA1Q06178 401 aaKnown RBP1.57□□□□□ -2.16
RPC40YPR110C RFU1Q08003 200 aa1.57□□□□□ -2.16
RPC40YPR110C FIT2Q08906 153 aa1.57□□□□□ -2.16
RPC40YPR110C YOR015WQ12169 119 aa1.57□□□□□ -2.16
RPC40YPR110C YLR361C-AQ3E795 98 aa1.57□□□□□ -2.16
RPC40YPR110C SEC16P48415 2195 aaKnown RBP1.57□□□□□ -2.16
RPC40YPR110C HYM1P32464 399 aa1.56□□□□□ -2.16
RPC40YPR110C GSP2P32836 220 aaKnown RBP1.56□□□□□ -2.16
RPC40YPR110C HTD2P38790 280 aaKnown RBP1.56□□□□□ -2.16
RPC40YPR110C DLS1P40366 167 aa1.56□□□□□ -2.16
RPC40YPR110C YKR005CQ02203 525 aa1.56□□□□□ -2.16
RPC40YPR110C RAV2Q03956 351 aa1.56□□□□□ -2.16
RPC40YPR110C RAF1Q06891 181 aa1.56□□□□□ -2.16
RPC40YPR110C CDC39P25655 2108 aaKnown RBP1.55□□□□□ -2.16
RPC40YPR110C COX5BP00425 151 aa1.55□□□□□ -2.16
RPC40YPR110C PBI2P0CT04 75 aaKnown RBP1.55□□□□□ -2.16
RPC40YPR110C YBL010CP32788 280 aa1.55□□□□□ -2.16
RPC40YPR110C TRS20P38334 175 aa1.55□□□□□ -2.16
RPC40YPR110C YFL065CP43539 102 aa1.55□□□□□ -2.16
RPC40YPR110C YFL051CP43552 160 aa1.55□□□□□ -2.16
RPC40YPR110C FIP1P45976 327 aa1.55□□□□□ -2.16
RPC40YPR110C SIP18P50263 79 aa1.55□□□□□ -2.16
RPC40YPR110C SBH1P52870 82 aa1.55□□□□□ -2.16
RPC40YPR110C HHT1P61830 136 aa1.55□□□□□ -2.16
RPC40YPR110C KEI1Q06346 221 aa1.55□□□□□ -2.16
RPC40YPR110C HRD1Q08109 551 aa1.55□□□□□ -2.16
RPC40YPR110C SPS2P08459 502 aa1.54□□□□□ -2.16
RPC40YPR110C BUD23P25627 275 aaPredicted RBP1.54□□□□□ -2.16
RPC40YPR110C RPB7P34087 171 aa1.54□□□□□ -2.16
RPC40YPR110C YBR242WP38331 238 aa1.54□□□□□ -2.16
RPC40YPR110C PRS3P38689 320 aaKnown RBP1.54□□□□□ -2.16
RPC40YPR110C GLR1P41921 483 aaKnown RBP1.54□□□□□ -2.16
RPC40YPR110C DIE2P50076 525 aa1.54□□□□□ -2.16
RPC40YPR110C YDR391CQ04170 232 aa1.54□□□□□ -2.16
RPC40YPR110C FIT3Q08907 204 aa1.54□□□□□ -2.16
RPC40YPR110C HUT1Q12520 339 aa1.54□□□□□ -2.16
RPC40YPR110C YOR381W-AQ3E804 55 aa1.54□□□□□ -2.16
RPC40YPR110C ATP5P09457 212 aa1.53□□□□□ -2.16
RPC40YPR110C RPL43AP0CX25 92 aaKnown RBP1.53□□□□□ -2.16
RPC40YPR110C RPL43BP0CX26 92 aa1.53□□□□□ -2.16
RPC40YPR110C TOR1P35169 2470 aa1.53□□□□□ -2.16
RPC40YPR110C YRA2P36036 203 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
RPC40YPR110C YHL037CP38733 133 aa1.53□□□□□ -2.16
RPC40YPR110C NSE4P43124 402 aa1.53□□□□□ -2.16
RPC40YPR110C GNA1P43577 159 aaPredicted RBP1.53□□□□□ -2.16
RPC40YPR110C DYN2Q02647 92 aa1.53□□□□□ -2.16
RPC40YPR110C VPS28Q02767 242 aa1.53□□□□□ -2.16
RPC40YPR110C CSF1Q12150 2958 aa1.53□□□□□ -2.17
RPC40YPR110C SEN2P16658 377 aa1.52□□□□□ -2.17
RPC40YPR110C MRP17P28778 131 aa1.52□□□□□ -2.17
RPC40YPR110C SUA7P29055 345 aaPredicted RBP1.52□□□□□ -2.17
RPC40YPR110C SRL3P36167 246 aa1.52□□□□□ -2.17
RPC40YPR110C YER181CP40097 107 aa1.52□□□□□ -2.17
RPC40YPR110C GLC8P41818 229 aa1.52□□□□□ -2.17
RPC40YPR110C SED1Q01589 338 aa1.52□□□□□ -2.17
RPC40YPR110C YPL067CQ02754 198 aa1.52□□□□□ -2.17
RPC40YPR110C COF1Q03048 143 aaKnown RBP1.52□□□□□ -2.17
RPC40YPR110C YHP1Q04116 353 aa1.52□□□□□ -2.17
RPC40YPR110C UPS1Q05776 175 aa1.52□□□□□ -2.17
RPC40YPR110C YOR385WQ08909 290 aa1.52□□□□□ -2.17
RPC40YPR110C RPL39P04650 51 aa1.51□□□□□ -2.17
RPC40YPR110C NHP6AP11632 93 aaKnown RBP1.51□□□□□ -2.17
RPC40YPR110C YCR101CP25607 182 aa1.51□□□□□ -2.17
RPC40YPR110C YER137CP40083 148 aaKnown RBP1.51□□□□□ -2.17
RPC40YPR110C CCS1P40202 249 aaKnown RBP1.51□□□□□ -2.17
RPC40YPR110C YGL193CP53097 103 aa1.51□□□□□ -2.17
RPC40YPR110C SYM1Q06563 197 aa1.51□□□□□ -2.17
RPC40YPR110C SCP1Q08873 200 aa1.51□□□□□ -2.17
RPC40YPR110C YOR192C-CQ3E736 78 aa1.51□□□□□ -2.17
RPC40YPR110C IRA2P19158 3079 aa1.51□□□□□ -2.17
RPC40YPR110C IRA1P18963 3092 aa1.5□□□□□ -2.17
RPC40YPR110C RAD6P06104 172 aa1.5□□□□□ -2.17
RPC40YPR110C AQY2P0CD90 149 aa1.5□□□□□ -2.17
RPC40YPR110C STF2P16965 84 aa1.5□□□□□ -2.17
RPC40YPR110C MRPL24P36525 258 aaPredicted RBP1.5□□□□□ -2.17
RPC40YPR110C CIN5P40917 295 aa1.5□□□□□ -2.17
RPC40YPR110C YNR064CP53750 290 aa1.5□□□□□ -2.17
RPC40YPR110C UPS3Q04006 179 aa1.5□□□□□ -2.17
RPC40YPR110C FIT1Q04433 528 aa1.5□□□□□ -2.17
RPC40YPR110C RIM9Q04734 239 aa1.5□□□□□ -2.17
RPC40YPR110C COA4Q05809 96 aa1.5□□□□□ -2.17
RPC40YPR110C YOL118CQ08259 102 aa1.5□□□□□ -2.17
RPC40YPR110C WIP1Q2V2P8 89 aa1.5□□□□□ -2.17
RPC40YPR110C YCL048W-AQ2V2Q2 79 aa1.5□□□□□ -2.17
RPC40YPR110C YPR108W-AQ3E7B3 70 aa1.5□□□□□ -2.17
RPC40YPR110C HUG1Q6Q5K6 68 aa1.5□□□□□ -2.17
RPC40YPR110C YLR365WQ7LIF2 110 aa1.5□□□□□ -2.17
RPC40YPR110C VAR1P02381 398 aa1.49□□□□□ -2.17
RPC40YPR110C YHR140WP38842 239 aa1.49□□□□□ -2.17
RPC40YPR110C VMA7P39111 118 aa1.49□□□□□ -2.17
RPC40YPR110C YEL008WP40001 126 aa1.49□□□□□ -2.17
RPC40YPR110C SWM2P40342 146 aa1.49□□□□□ -2.17
RPC40YPR110C GEP7P53171 287 aa1.49□□□□□ -2.17
RPC40YPR110C YDR366CP87287 132 aa1.49□□□□□ -2.17
RPC40YPR110C YPD1Q07688 167 aa1.49□□□□□ -2.17
RPC40YPR110C RRT7Q07829 113 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms