RNA–Protein interactions for RNA: YMR260C

TIF11, Transcript of Translation initiation factor eIF1A, yeast

Gene TIF11, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF11	YMR260C	YMR141C	P40211	102 aa		0.68	□□□□□ -2.3
TIF11	YMR260C	YIL163C	P40448	117 aa		0.68	□□□□□ -2.3
TIF11	YMR260C	YIL014C-A	Q02598	104 aa		0.68	□□□□□ -2.3
TIF11	YMR260C	SPC24	Q04477	213 aa		0.68	□□□□□ -2.3
TIF11	YMR260C	YOR097C	Q12274	175 aa	Predicted RBP	0.68	□□□□□ -2.3
TIF11	YMR260C	YOR376W-A	Q3E805	51 aa		0.68	□□□□□ -2.3
TIF11	YMR260C	HUG1	Q6Q5K6	68 aa		0.68	□□□□□ -2.3
TIF11	YMR260C	ECM5	Q03214	1411 aa		0.67	□□□□□ -2.3
TIF11	YMR260C	MRPL31	P14063	131 aa	Predicted RBP	0.67	□□□□□ -2.3
TIF11	YMR260C	TDA2	P40045	126 aa		0.67	□□□□□ -2.3
TIF11	YMR260C	YFR035C	P43608	114 aa		0.67	□□□□□ -2.3
TIF11	YMR260C	ICS3	P47034	131 aa		0.67	□□□□□ -2.3
TIF11	YMR260C	YLR194C	Q05777	254 aa		0.67	□□□□□ -2.3
TIF11	YMR260C	YPL261C	Q08976	102 aa		0.67	□□□□□ -2.3
TIF11	YMR260C	RPL22A	P05749	121 aa	Known RBP	0.66	□□□□□ -2.3
TIF11	YMR260C	OST5	Q92316	86 aa		0.66	□□□□□ -2.3
TIF11	YMR260C	GSC2	P40989	1895 aa		0.66	□□□□□ -2.3
TIF11	YMR260C	EMP24	P32803	203 aa	Known RBP	0.65	□□□□□ -2.31
TIF11	YMR260C	POR2	P40478	281 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	PAM16	P42949	149 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	YMR321C	Q04898	105 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	YLR042C	Q07990	161 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	RTR2	Q12378	196 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	OCA6	Q12454	224 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	YGL041C-B	Q3E750	60 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	ENV10	Q99382	181 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	TY4B-J	P47024	1803 aa		0.65	□□□□□ -2.31
TIF11	YMR260C	YOR304C-A	O14468	76 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	SRX1	P36077	127 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	YAR029W	P39549	74 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	YER187W	P40102	141 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	GTT1	P40582	234 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	RPL22B	P56628	122 aa	Known RBP	0.64	□□□□□ -2.31
TIF11	YMR260C	ARL3	Q02804	198 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	DAD1	Q12248	94 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	YLR363W-A	Q3E747	85 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	YGR240C-A	Q3E786	66 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	PCC1	Q3E833	88 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	YLR365W	Q7LIF2	110 aa		0.64	□□□□□ -2.31
TIF11	YMR260C	YPK9	Q12697	1472 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	RPL43A	P0CX25	92 aa	Known RBP	0.63	□□□□□ -2.31
TIF11	YMR260C	RPL43B	P0CX26	92 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	YHR130C	P38834	111 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	SNN1	P48232	102 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	PAU12	P53343	120 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	YOR034C-A	Q3E735	80 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	SPP41	P38904	1435 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	YRF1-3	P0CX14	1859 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	YRF1-7	P0CX15	1859 aa		0.63	□□□□□ -2.31
TIF11	YMR260C	ADK1	P07170	222 aa	Known RBP	0.62	□□□□□ -2.31
TIF11	YMR260C	COX23	P38824	151 aa		0.62	□□□□□ -2.31
TIF11	YMR260C	CYB5	P40312	120 aa		0.62	□□□□□ -2.31
TIF11	YMR260C	YIR020C	P40575	100 aa		0.62	□□□□□ -2.31
TIF11	YMR260C	YJR128W	P47162	119 aa		0.61	□□□□□ -2.31
TIF11	YMR260C	YGR164W	P53291	111 aa		0.61	□□□□□ -2.31
TIF11	YMR260C	SWC7	Q06707	132 aa		0.61	□□□□□ -2.31
TIF11	YMR260C	YLR285C-A	Q3E771	56 aa		0.61	□□□□□ -2.31
TIF11	YMR260C	PRP8	P33334	2413 aa	Known RBP	0.61	□□□□□ -2.31
TIF11	YMR260C	LAA1	P39526	2014 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	YER039C-A	P0CD97	72 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	VMA21	P41806	77 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	HUR1	P45820	110 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	RUB1	Q03919	77 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	YCL048W-A	Q2V2Q2	79 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	YLR307C-A	Q3E825	87 aa		0.6	□□□□□ -2.31
TIF11	YMR260C	URA2	P07259	2214 aa	Known RBP	0.59	□□□□□ -2.31
TIF11	YMR260C	PAU2	P32612	120 aa		0.59	□□□□□ -2.31
TIF11	YMR260C	PAU24	P38155	120 aa		0.59	□□□□□ -2.31
TIF11	YMR260C	YEA6	P39953	335 aa		0.59	□□□□□ -2.31
TIF11	YMR260C	VPS55	P47111	140 aa		0.59	□□□□□ -2.31
TIF11	YMR260C	LCL1	Q02786	101 aa		0.59	□□□□□ -2.31
TIF11	YMR260C	MDS3	P53094	1487 aa		0.59	□□□□□ -2.32
TIF11	YMR260C	DNA2	P38859	1522 aa		0.59	□□□□□ -2.32
TIF11	YMR260C	PAU19	P0CE85	124 aa		0.58	□□□□□ -2.32
TIF11	YMR260C	YLR157W-E	P0CF00	54 aa		0.58	□□□□□ -2.32
TIF11	YMR260C	HMRA2	P0CY13	119 aa		0.58	□□□□□ -2.32
TIF11	YMR260C	PAU3	P25610	124 aa		0.58	□□□□□ -2.32
TIF11	YMR260C	GNA1	P43577	159 aa	Predicted RBP	0.58	□□□□□ -2.32
TIF11	YMR260C	TY1B-H	O13535	1793 aa		0.57	□□□□□ -2.32
TIF11	YMR260C	RPS12	P48589	143 aa	Known RBP	0.57	□□□□□ -2.32
TIF11	YMR260C	LSM6	Q06406	86 aa	Known RBP	0.57	□□□□□ -2.32
TIF11	YMR260C	YOS1	Q3E834	85 aa		0.57	□□□□□ -2.32
TIF11	YMR260C	YLR419W	Q06698	1435 aa	Known RBP	0.56	□□□□□ -2.32
TIF11	YMR260C	LHP1	P33399	275 aa	Known RBP	0.56	□□□□□ -2.32
TIF11	YMR260C	YHR138C	P38841	114 aa	Predicted RBP	0.56	□□□□□ -2.32
TIF11	YMR260C	MRPS12	P53732	153 aa		0.56	□□□□□ -2.32
TIF11	YMR260C	TSC11	P40061	1430 aa		0.55	□□□□□ -2.32
TIF11	YMR260C	SEC16	P48415	2195 aa	Known RBP	0.55	□□□□□ -2.32
TIF11	YMR260C	SRB6	P32570	121 aa		0.55	□□□□□ -2.32
TIF11	YMR260C	RGI1	P40043	161 aa	Predicted RBP	0.55	□□□□□ -2.32
TIF11	YMR260C	YER137C	P40083	148 aa	Known RBP	0.55	□□□□□ -2.32
TIF11	YMR260C	YMR090W	Q04304	227 aa	Known RBP	0.55	□□□□□ -2.32
TIF11	YMR260C	YMR103C	Q04436	120 aa		0.55	□□□□□ -2.32
TIF11	YMR260C	YOL118C	Q08259	102 aa		0.55	□□□□□ -2.32
TIF11	YMR260C	LYS2	P07702	1392 aa		0.55	□□□□□ -2.32
TIF11	YMR260C	CCW14	O13547	238 aa		0.54	□□□□□ -2.32
TIF11	YMR260C	YCR101C	P25607	182 aa		0.54	□□□□□ -2.32
TIF11	YMR260C	BUD23	P25627	275 aa	Predicted RBP	0.54	□□□□□ -2.32
TIF11	YMR260C	PAU16	P35994	123 aa		0.54	□□□□□ -2.32
TIF11	YMR260C	YBR090C	P38253	122 aa		0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms