RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PWP1	YLR196W	RPP1	P38786	293 aa		4.27	□□□□□ -1.73
PWP1	YLR196W	YER181C	P40097	107 aa		4.27	□□□□□ -1.73
PWP1	YLR196W	TPC1	P53257	314 aa		4.27	□□□□□ -1.73
PWP1	YLR196W	VPS68	Q12016	184 aa		4.27	□□□□□ -1.73
PWP1	YLR196W	MPD1	Q12404	318 aa	Known RBP	4.27	□□□□□ -1.73
PWP1	YLR196W	BET1	P22804	142 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	YPT10	P38146	199 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	ANS1	P38832	159 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	RRT13	P40042	185 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	MIX17	Q03667	156 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	RRT15	Q3E811	62 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	RPL16A	P26784	199 aa	Known RBP	4.26	□□□□□ -1.73
PWP1	YLR196W	YBR144C	P34215	104 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	YGL193C	P53097	103 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	FHN1	P53279	174 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	HAL1	Q01766	294 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	MIX14	Q04341	121 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	MCH4	Q08268	501 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	NIP7	Q08962	181 aa	Known RBP	4.26	□□□□□ -1.73
PWP1	YLR196W	NPC2	Q12408	173 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	EMC6	Q12431	108 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.26	□□□□□ -1.73
PWP1	YLR196W	HTL1	Q9URQ5	78 aa		4.26	□□□□□ -1.73
PWP1	YLR196W	FZF1	P32805	299 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	SWD3	P38123	315 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	DFG10	P40526	253 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	CIS3	P47001	227 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	SWT21	P53873	357 aa	Predicted RBP	4.25	□□□□□ -1.73
PWP1	YLR196W	YOR105W	Q08504	108 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	YDR381C-A	Q3E6R5	114 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	YOR376W-A	Q3E805	51 aa		4.25	□□□□□ -1.73
PWP1	YLR196W	Q0255	P03881	472 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	APS1	P35181	156 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	YLR112W	Q12130	139 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	AYT1	Q12226	474 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	YHR214C-E	Q8TGK0	99 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	YBR182C-A	Q8TGU6	64 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	YHR139C-A	O13536	103 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	AGA2	P32781	87 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	SKI6	P46948	246 aa	Predicted RBP	4.24	□□□□□ -1.73
PWP1	YLR196W	PGU1	P47180	361 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	HNT2	P49775	206 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	LEE1	Q02799	301 aa	Known RBP	4.24	□□□□□ -1.73
PWP1	YLR196W	LPP1	Q04396	274 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	NAG1	Q8TGN9	163 aa		4.24	□□□□□ -1.73
PWP1	YLR196W	BRR2	P32639	2163 aa	Known RBP	4.23	□□□□□ -1.73
PWP1	YLR196W	YNL208W	P40159	199 aa	Known RBP	4.23	□□□□□ -1.73
PWP1	YLR196W	YFR035C	P43608	114 aa		4.23	□□□□□ -1.73
PWP1	YLR196W	VPS55	P47111	140 aa		4.23	□□□□□ -1.73
PWP1	YLR196W	YGL034C	P53186	121 aa		4.23	□□□□□ -1.73
PWP1	YLR196W	BRP1	P53194	125 aa		4.23	□□□□□ -1.73
PWP1	YLR196W	USV1	Q12132	391 aa		4.23	□□□□□ -1.73
PWP1	YLR196W	YHR213W	P0CI67	198 aa		4.22	□□□□□ -1.73
PWP1	YLR196W	YBL059W	P34224	193 aa		4.22	□□□□□ -1.73
PWP1	YLR196W	YPS5	P53057	165 aa		4.22	□□□□□ -1.73
PWP1	YLR196W	NCE102	Q12207	173 aa	RIP-Chip data	4.22	□□□□□ -1.73	not detected
PWP1	YLR196W	CDC39	P25655	2108 aa	Known RBP	4.21	□□□□□ -1.73
PWP1	YLR196W	YFL019C	P43576	117 aa		4.21	□□□□□ -1.73
PWP1	YLR196W	YGL118C	P53132	145 aa		4.21	□□□□□ -1.73
PWP1	YLR196W	LSM6	Q06406	86 aa	Known RBP	4.21	□□□□□ -1.73
PWP1	YLR196W	FAB1	P34756	2278 aa		4.21	□□□□□ -1.74
PWP1	YLR196W	YDL242W	Q07746	117 aa		4.21	□□□□□ -1.74
PWP1	YLR196W	TDA8	Q6B2U8	126 aa		4.21	□□□□□ -1.74
PWP1	YLR196W	MRPL31	P14063	131 aa	Predicted RBP	4.2	□□□□□ -1.74
PWP1	YLR196W	HSP12	P22943	109 aa	Known RBP	4.2	□□□□□ -1.74
PWP1	YLR196W	RPL16B	P26785	198 aa	Known RBP	4.2	□□□□□ -1.74
PWP1	YLR196W	SPG4	Q04438	115 aa		4.2	□□□□□ -1.74
PWP1	YLR196W	SOD1	P00445	154 aa	Known RBP	4.19	□□□□□ -1.74
PWP1	YLR196W	RPB9	P27999	122 aa		4.19	□□□□□ -1.74
PWP1	YLR196W	IMP1	P28627	190 aa		4.19	□□□□□ -1.74
PWP1	YLR196W	YKL044W	P36092	106 aa		4.19	□□□□□ -1.74
PWP1	YLR196W	YKR045C	P36138	183 aa		4.19	□□□□□ -1.74
PWP1	YLR196W	SWS2	P53937	143 aa		4.19	□□□□□ -1.74
PWP1	YLR196W	YLR365W	Q7LIF2	110 aa		4.19	□□□□□ -1.74
PWP1	YLR196W	MDM35	O60200	86 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	SPS100	P13130	326 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YNL217W	P40152	326 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YNL200C	P40165	246 aa	Known RBP	4.18	□□□□□ -1.74
PWP1	YLR196W	UBC13	P52490	153 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YGR018C	P53211	109 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YIL014C-A	Q02598	104 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	MIM1	Q08176	113 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	BLM10	P43583	2143 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	SEC16	P48415	2195 aa	Known RBP	4.18	□□□□□ -1.74
PWP1	YLR196W	FPR1	P20081	114 aa	Known RBP	4.18	□□□□□ -1.74
PWP1	YLR196W	YER187W	P40102	141 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YGL088W	P53151	121 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	NCE101	Q02820	53 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YDR102C	Q03864	110 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	YML100W-A	Q8TGT0	57 aa		4.18	□□□□□ -1.74
PWP1	YLR196W	ARF1	P11076	181 aa	Known RBP	4.17	□□□□□ -1.74
PWP1	YLR196W	YCR025C	P25352	136 aa		4.17	□□□□□ -1.74
PWP1	YLR196W	YEL045C	P32616	141 aa		4.17	□□□□□ -1.74
PWP1	YLR196W	YHR180W	P38868	163 aa		4.17	□□□□□ -1.74
PWP1	YLR196W	KEG1	P43614	200 aa		4.17	□□□□□ -1.74
PWP1	YLR196W	ICY1	Q04329	127 aa		4.17	□□□□□ -1.74
PWP1	YLR196W	GLT1	Q12680	2145 aa	Known RBP	4.17	□□□□□ -1.74
PWP1	YLR196W	FAS1	P07149	2051 aa	Known RBP	4.16	□□□□□ -1.74
PWP1	YLR196W	RPS22A	P0C0W1	130 aa	Known RBP	4.16	□□□□□ -1.74
PWP1	YLR196W	YOR268C	Q08734	132 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 151.5 ms