RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	HMX1	P32339	317 aa		4.81	□□□□□ -1.64
TSR2	YLR435W	YHR173C	P38864	112 aa		4.81	□□□□□ -1.64
TSR2	YLR435W	SNX4	P47057	423 aa		4.81	□□□□□ -1.64
TSR2	YLR435W	SNN1	P48232	102 aa		4.81	□□□□□ -1.64
TSR2	YLR435W	YCR043C	P25361	127 aa		4.8	□□□□□ -1.64
TSR2	YLR435W	VMA7	P39111	118 aa		4.8	□□□□□ -1.64
TSR2	YLR435W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	RIP-Chip
TSR2	YLR435W	PAU1	P0CE88	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU14	P0CE89	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU6	P0CE90	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU18	P0CE91	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU8	P0CE92	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU11	P0CE93	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	RPS11A	P0CX47	156 aa	Known RBP	4.79	□□□□□ -1.64
TSR2	YLR435W	RPS11B	P0CX48	156 aa	Known RBP	4.79	□□□□□ -1.64
TSR2	YLR435W	YBR090C	P38253	122 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU13	P38725	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU10	Q03050	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU20	Q08322	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	CCW12	Q12127	133 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	ATP14	Q12349	124 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	PAU9	Q3E770	120 aa		4.79	□□□□□ -1.64
TSR2	YLR435W	RPL31B	P0C2H9	113 aa	Known RBP	4.78	□□□□□ -1.64
TSR2	YLR435W	RPL2A	P0CX45	254 aa	Known RBP	4.78	□□□□□ -1.64
TSR2	YLR435W	RPL2B	P0CX46	254 aa	Known RBP	4.78	□□□□□ -1.64
TSR2	YLR435W	ACP1	P32463	125 aa		4.78	□□□□□ -1.64
TSR2	YLR435W	SHG1	P38337	142 aa		4.78	□□□□□ -1.64
TSR2	YLR435W	HIT1	P46973	164 aa		4.78	□□□□□ -1.64
TSR2	YLR435W	DAD4	P69851	72 aa		4.78	□□□□□ -1.64
TSR2	YLR435W	YPR063C	Q12160	140 aa		4.78	□□□□□ -1.64
TSR2	YLR435W	MRPL20	P22354	195 aa	Predicted RBP	4.77	□□□□□ -1.65
TSR2	YLR435W	VMA9	Q3E7B6	73 aa		4.77	□□□□□ -1.65
TSR2	YLR435W	SPI1	P40092	148 aa		4.76	□□□□□ -1.65
TSR2	YLR435W	UBC12	P52491	188 aa		4.76	□□□□□ -1.65
TSR2	YLR435W	HAL1	Q01766	294 aa		4.76	□□□□□ -1.65
TSR2	YLR435W	RPS22A	P0C0W1	130 aa	Known RBP	4.75	□□□□□ -1.65
TSR2	YLR435W	FZF1	P32805	299 aa		4.75	□□□□□ -1.65
TSR2	YLR435W	POG1	P40473	351 aa		4.75	□□□□□ -1.65
TSR2	YLR435W	DAD1	Q12248	94 aa		4.75	□□□□□ -1.65
TSR2	YLR435W	Q0255	P03881	472 aa		4.74	□□□□□ -1.65
TSR2	YLR435W	CPT1	P17898	393 aa		4.74	□□□□□ -1.65
TSR2	YLR435W	VMA16	P23968	213 aa		4.74	□□□□□ -1.65
TSR2	YLR435W	SGF11	Q03067	99 aa		4.74	□□□□□ -1.65
TSR2	YLR435W	NAT3	Q06504	195 aa		4.74	□□□□□ -1.65
TSR2	YLR435W	VAR1	P02381	398 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	AME1	P38313	324 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	CYB5	P40312	120 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	VHS2	P40463	436 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	DAD3	P69850	94 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	YMR253C	Q04835	414 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	YLR342W-A	Q3E810	57 aa		4.73	□□□□□ -1.65
TSR2	YLR435W	PGD1	P40356	397 aa		4.72	□□□□□ -1.65
TSR2	YLR435W	YFR045W	P43617	309 aa		4.72	□□□□□ -1.65
TSR2	YLR435W	VAM10	Q08474	114 aa		4.72	□□□□□ -1.65
TSR2	YLR435W	PCC1	Q3E833	88 aa		4.72	□□□□□ -1.65
TSR2	YLR435W	SRB6	P32570	121 aa		4.71	□□□□□ -1.66
TSR2	YLR435W	YGR017W	P53210	297 aa		4.71	□□□□□ -1.66
TSR2	YLR435W	SNO1	Q03144	224 aa		4.71	□□□□□ -1.66
TSR2	YLR435W	YOR105W	Q08504	108 aa		4.71	□□□□□ -1.66
TSR2	YLR435W	YCL001W-B	Q96VH2	84 aa		4.71	□□□□□ -1.66
TSR2	YLR435W	POF1	P25576	258 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	RPL16B	P26785	198 aa	Known RBP	4.7	□□□□□ -1.66
TSR2	YLR435W	ECM25	P32525	599 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	MRPL4	P36517	319 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	SRP14	P38985	146 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	RRT13	P40042	185 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	KEG1	P43614	200 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	BNS1	P50084	137 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	ATP19	P81451	68 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	SMT3	Q12306	101 aa	Known RBP	4.7	□□□□□ -1.66
TSR2	YLR435W	YCR075W-A	Q3E830	75 aa		4.7	□□□□□ -1.66
TSR2	YLR435W	RPL42A	P0CX27	106 aa	Known RBP	4.69	□□□□□ -1.66
TSR2	YLR435W	RPL42B	P0CX28	106 aa	Known RBP	4.69	□□□□□ -1.66
TSR2	YLR435W	LDS1	P31379	325 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	AGA1	P32323	725 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	RPR2	P40571	144 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	PHS1	P40857	217 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	YPS5	P53057	165 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	YGL185C	P53100	379 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	TIM22	Q12328	207 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	YBR200W-A	Q3E755	54 aa		4.69	□□□□□ -1.66
TSR2	YLR435W	SEC59	P20048	519 aa		4.68	□□□□□ -1.66
TSR2	YLR435W	SRP21	P32342	167 aa		4.68	□□□□□ -1.66
TSR2	YLR435W	DIA1	P54005	336 aa		4.68	□□□□□ -1.66
TSR2	YLR435W	FMP49	A0A023PZB3	126 aa		4.67	□□□□□ -1.66
TSR2	YLR435W	TIR1	P10863	254 aa		4.67	□□□□□ -1.66
TSR2	YLR435W	LAC1	P28496	418 aa		4.67	□□□□□ -1.66
TSR2	YLR435W	NTF2	P33331	125 aa	Known RBP	4.67	□□□□□ -1.66
TSR2	YLR435W	UTP23	Q12339	254 aa	Known RBP	4.67	□□□□□ -1.66
TSR2	YLR435W	DCN1	Q12395	269 aa		4.67	□□□□□ -1.66
TSR2	YLR435W	MRPL31	P14063	131 aa	Predicted RBP	4.66	□□□□□ -1.66
TSR2	YLR435W	CUP2	P15315	225 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	QRI5	P32344	111 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	RPB11	P38902	120 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	YNL217W	P40152	326 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	BRP1	P53194	125 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	YDR366C	P87287	132 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	DXO1	Q06349	442 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	YBR126W-A	Q8TGU7	68 aa		4.66	□□□□□ -1.66
TSR2	YLR435W	RPL12A	P0CX53	165 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 104.8 ms