RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YGR018CP53211 109 aa2.66□□□□□ -1.98
YIR040CYIR040C GRX5Q02784 150 aa2.66□□□□□ -1.98
YIR040CYIR040C SPG3Q04398 127 aaPredicted RBP2.66□□□□□ -1.98
YIR040CYIR040C ELP6Q04868 273 aa2.66□□□□□ -1.98
YIR040CYIR040C YLR281CQ05863 155 aa2.66□□□□□ -1.98
YIR040CYIR040C YOR186WQ08560 144 aa2.66□□□□□ -1.98
YIR040CYIR040C YOR015WQ12169 119 aa2.66□□□□□ -1.98
YIR040CYIR040C EMC6Q12431 108 aa2.66□□□□□ -1.98
YIR040CYIR040C YRA2P36036 203 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
YIR040CYIR040C ANS1P38832 159 aa2.65□□□□□ -1.99
YIR040CYIR040C MIC27P50945 234 aa2.65□□□□□ -1.99
YIR040CYIR040C HAL1Q01766 294 aa2.65□□□□□ -1.99
YIR040CYIR040C RIM9Q04734 239 aa2.65□□□□□ -1.99
YIR040CYIR040C YMR252CQ04814 134 aa2.65□□□□□ -1.99
YIR040CYIR040C ATG41Q12048 136 aa2.65□□□□□ -1.99
YIR040CYIR040C YDL211CQ12121 372 aa2.65□□□□□ -1.99
YIR040CYIR040C NCE102Q12207 173 aaRIP-Chip data2.65□□□□□ -1.99not detected
YIR040CYIR040C DAD1Q12248 94 aa2.65□□□□□ -1.99
YIR040CYIR040C CSR2Q12734 1121 aa2.65□□□□□ -1.99
YIR040CYIR040C YKL023C-AQ2V2P3 75 aa2.65□□□□□ -1.99
YIR040CYIR040C YDR119W-AQ2V2P9 66 aa2.65□□□□□ -1.99
YIR040CYIR040C SNF2P22082 1703 aa2.65□□□□□ -1.99
YIR040CYIR040C YBL081WP38180 368 aaKnown RBP2.64□□□□□ -1.99
YIR040CYIR040C UMP1P38293 148 aa2.64□□□□□ -1.99
YIR040CYIR040C SPO73P40031 143 aa2.64□□□□□ -1.99
YIR040CYIR040C YJL218WP40892 196 aaKnown RBP2.64□□□□□ -1.99
YIR040CYIR040C PIR5P46999 287 aa2.64□□□□□ -1.99
YIR040CYIR040C VPS25P47142 202 aa2.64□□□□□ -1.99
YIR040CYIR040C YGL262WP53054 175 aa2.64□□□□□ -1.99
YIR040CYIR040C PCP1P53259 346 aa2.64□□□□□ -1.99
YIR040CYIR040C NRM1P53718 249 aa2.64□□□□□ -1.99
YIR040CYIR040C YDR042CQ03205 200 aa2.64□□□□□ -1.99
YIR040CYIR040C YLR296WQ05898 108 aa2.64□□□□□ -1.99
YIR040CYIR040C YAL063C-AQ3E791 96 aa2.64□□□□□ -1.99
YIR040CYIR040C YPL038W-AQ3E7B4 63 aa2.64□□□□□ -1.99
YIR040CYIR040C YLR365WQ7LIF2 110 aa2.64□□□□□ -1.99
YIR040CYIR040C ODC2Q99297 307 aa2.64□□□□□ -1.99
YIR040CYIR040C YER145C-AA0A023PYF4 145 aa2.63□□□□□ -1.99
YIR040CYIR040C BET1P22804 142 aa2.63□□□□□ -1.99
YIR040CYIR040C LDB16P25587 256 aa2.63□□□□□ -1.99
YIR040CYIR040C RPL16AP26784 199 aaKnown RBP2.63□□□□□ -1.99
YIR040CYIR040C OM14P38325 134 aa2.63□□□□□ -1.99
YIR040CYIR040C YBR292CP38357 123 aa2.63□□□□□ -1.99
YIR040CYIR040C YND1P40009 630 aa2.63□□□□□ -1.99
YIR040CYIR040C YIL054WP40524 105 aa2.63□□□□□ -1.99
YIR040CYIR040C TES1P41903 349 aaKnown RBP2.63□□□□□ -1.99
YIR040CYIR040C HUR1P45820 110 aa2.63□□□□□ -1.99
YIR040CYIR040C SKI6P46948 246 aaPredicted RBP2.63□□□□□ -1.99
YIR040CYIR040C TPC1P53257 314 aa2.63□□□□□ -1.99
YIR040CYIR040C YNR064CP53750 290 aa2.63□□□□□ -1.99
YIR040CYIR040C TDA7P53882 636 aaPredicted RBP2.63□□□□□ -1.99
YIR040CYIR040C TVP15Q03860 143 aa2.63□□□□□ -1.99
YIR040CYIR040C HPA2Q06592 156 aa2.63□□□□□ -1.99
YIR040CYIR040C MSA1Q08471 629 aa2.63□□□□□ -1.99
YIR040CYIR040C YLR112WQ12130 139 aa2.63□□□□□ -1.99
YIR040CYIR040C POC4Q12245 148 aaPredicted RBP2.63□□□□□ -1.99
YIR040CYIR040C YMR175W-AQ3E766 64 aa2.63□□□□□ -1.99
YIR040CYIR040C TDA8Q6B2U8 126 aa2.63□□□□□ -1.99
YIR040CYIR040C SCS22Q6Q595 175 aa2.63□□□□□ -1.99
YIR040CYIR040C MIC10Q96VH5 97 aa2.63□□□□□ -1.99
YIR040CYIR040C YRF1-3P0CX14 1859 aa2.62□□□□□ -1.99
YIR040CYIR040C YRF1-7P0CX15 1859 aa2.62□□□□□ -1.99
YIR040CYIR040C YRF1-6P53819 1859 aa2.62□□□□□ -1.99
YIR040CYIR040C RPL15AP05748 204 aaKnown RBP2.62□□□□□ -1.99
YIR040CYIR040C RPS19AP07280 144 aaKnown RBP2.62□□□□□ -1.99
YIR040CYIR040C RPS19BP07281 144 aaPredicted RBP2.62□□□□□ -1.99
YIR040CYIR040C RPL42AP0CX27 106 aaKnown RBP2.62□□□□□ -1.99
YIR040CYIR040C RPL42BP0CX28 106 aaKnown RBP2.62□□□□□ -1.99
YIR040CYIR040C URA5P13298 226 aaKnown RBP2.62□□□□□ -1.99
YIR040CYIR040C YCR006CP25350 157 aa2.62□□□□□ -1.99
YIR040CYIR040C TDA2P40045 126 aa2.62□□□□□ -1.99
YIR040CYIR040C YFR035CP43608 114 aa2.62□□□□□ -1.99
YIR040CYIR040C BNS1P50084 137 aa2.62□□□□□ -1.99
YIR040CYIR040C SWT21P53873 357 aaPredicted RBP2.62□□□□□ -1.99
YIR040CYIR040C ATP19P81451 68 aa2.62□□□□□ -1.99
YIR040CYIR040C SRL1Q08673 210 aa2.62□□□□□ -1.99
YIR040CYIR040C YBL008W-AQ3E821 79 aa2.62□□□□□ -1.99
YIR040CYIR040C YML100W-AQ8TGT0 57 aa2.62□□□□□ -1.99
YIR040CYIR040C YCL021W-AQ96VH3 125 aa2.62□□□□□ -1.99
YIR040CYIR040C DNF2Q12675 1612 aa2.61□□□□□ -1.99
YIR040CYIR040C SPS100P13130 326 aa2.61□□□□□ -1.99
YIR040CYIR040C YCR043CP25361 127 aa2.61□□□□□ -1.99
YIR040CYIR040C YAR068WP39564 161 aa2.61□□□□□ -1.99
YIR040CYIR040C PGU1P47180 361 aa2.61□□□□□ -1.99
YIR040CYIR040C SYM1Q06563 197 aa2.61□□□□□ -1.99
YIR040CYIR040C YOR105WQ08504 108 aa2.61□□□□□ -1.99
YIR040CYIR040C NIP7Q08962 181 aaKnown RBP2.61□□□□□ -1.99
YIR040CYIR040C COX19Q3E731 98 aa2.61□□□□□ -1.99
YIR040CYIR040C YCR024C-BQ3E7Z8 88 aa2.61□□□□□ -1.99
YIR040CYIR040C SPO14P36126 1683 aa2.6□□□□□ -1.99
YIR040CYIR040C YRF1-2P40105 1681 aa2.6□□□□□ -1.99
YIR040CYIR040C BNI1P41832 1953 aa2.6□□□□□ -1.99
YIR040CYIR040C RPS8AP0CX39 200 aaKnown RBP2.6□□□□□ -1.99
YIR040CYIR040C RPS8BP0CX40 200 aaKnown RBP2.6□□□□□ -1.99
YIR040CYIR040C SEC11P15367 167 aa2.6□□□□□ -1.99
YIR040CYIR040C YHL005CP38752 130 aa2.6□□□□□ -1.99
YIR040CYIR040C RRT13P40042 185 aa2.6□□□□□ -1.99
YIR040CYIR040C YER135CP40082 130 aa2.6□□□□□ -1.99
YIR040CYIR040C YHP1Q04116 353 aa2.6□□□□□ -1.99
YIR040CYIR040C TMC1Q08422 150 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms