RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C CSH1P38287 376 aa2.43□□□□□ -2.02
NFI1YOR156C DML1Q03652 475 aa2.43□□□□□ -2.02
NFI1YOR156C TY4B-HP0C2J7 1802 aa2.42□□□□□ -2.02
NFI1YOR156C TY4B-JP47024 1803 aa2.42□□□□□ -2.02
NFI1YOR156C LYS2P07702 1392 aa2.42□□□□□ -2.02
NFI1YOR156C BNI1P41832 1953 aa2.42□□□□□ -2.02
NFI1YOR156C CMD1P06787 147 aaKnown RBP2.42□□□□□ -2.02
NFI1YOR156C UBC6P33296 250 aaPredicted RBP2.42□□□□□ -2.02
NFI1YOR156C NKP2Q06162 153 aa2.42□□□□□ -2.02
NFI1YOR156C YPR127WQ06494 345 aa2.42□□□□□ -2.02
NFI1YOR156C RPO41P13433 1351 aaKnown RBP2.42□□□□□ -2.02
NFI1YOR156C HSP30P25619 332 aa2.42□□□□□ -2.02
NFI1YOR156C RPC19P28000 142 aaKnown RBP2.42□□□□□ -2.02
NFI1YOR156C HPA3P39979 161 aa2.42□□□□□ -2.02
NFI1YOR156C YFH7P43591 353 aa2.42□□□□□ -2.02
NFI1YOR156C ALB1P47019 175 aaPredicted RBP2.42□□□□□ -2.02
NFI1YOR156C CWC27Q02770 301 aa2.42□□□□□ -2.02
NFI1YOR156C RCE1Q03530 315 aa2.42□□□□□ -2.02
NFI1YOR156C YOR289WQ12012 251 aaPredicted RBP2.42□□□□□ -2.02
NFI1YOR156C FKS3Q04952 1785 aa2.41□□□□□ -2.02
NFI1YOR156C NMT1P14743 455 aa2.41□□□□□ -2.02
NFI1YOR156C APS3P47064 194 aa2.41□□□□□ -2.02
NFI1YOR156C XPT1P47165 209 aa2.41□□□□□ -2.02
NFI1YOR156C RRP17Q04031 235 aaPredicted RBP2.41□□□□□ -2.02
NFI1YOR156C YOR015WQ12169 119 aa2.41□□□□□ -2.02
NFI1YOR156C ADE6P38972 1358 aaKnown RBP2.41□□□□□ -2.02
NFI1YOR156C RPB7P34087 171 aa2.4□□□□□ -2.02
NFI1YOR156C RBL2P48606 106 aaKnown RBP2.4□□□□□ -2.02
NFI1YOR156C YKR005CQ02203 525 aa2.4□□□□□ -2.02
NFI1YOR156C YMR252CQ04814 134 aa2.4□□□□□ -2.02
NFI1YOR156C RDI1Q12434 202 aa2.4□□□□□ -2.02
NFI1YOR156C YOR381W-AQ3E804 55 aa2.4□□□□□ -2.03
NFI1YOR156C YHL042WP38729 150 aa2.39□□□□□ -2.03
NFI1YOR156C VPS28Q02767 242 aa2.39□□□□□ -2.03
NFI1YOR156C PIR1Q03178 341 aa2.39□□□□□ -2.03
NFI1YOR156C THI74Q04083 370 aa2.39□□□□□ -2.03
NFI1YOR156C YCR023CP25351 611 aa2.39□□□□□ -2.03
NFI1YOR156C UTP11P34247 250 aaPredicted RBP2.39□□□□□ -2.03
NFI1YOR156C YPR117WQ06116 2489 aa2.39□□□□□ -2.03
NFI1YOR156C AME1P38313 324 aa2.38□□□□□ -2.03
NFI1YOR156C EDC3P39998 551 aaKnown RBP2.38□□□□□ -2.03
NFI1YOR156C MPM1P40364 252 aa2.38□□□□□ -2.03
NFI1YOR156C UBR2Q07963 1872 aa2.38□□□□□ -2.03
NFI1YOR156C UTP10P42945 1769 aaKnown RBP2.37□□□□□ -2.03
NFI1YOR156C TIM13P53299 105 aa2.37□□□□□ -2.03
NFI1YOR156C UPS1Q05776 175 aa2.37□□□□□ -2.03
NFI1YOR156C FAS2P19097 1887 aaKnown RBP2.37□□□□□ -2.03
NFI1YOR156C BUD23P25627 275 aaPredicted RBP2.37□□□□□ -2.03
NFI1YOR156C YEL008WP40001 126 aa2.37□□□□□ -2.03
NFI1YOR156C YHP1Q04116 353 aa2.37□□□□□ -2.03
NFI1YOR156C POP7P38291 140 aa2.36□□□□□ -2.03
NFI1YOR156C YFL065CP43539 102 aa2.36□□□□□ -2.03
NFI1YOR156C RIM9Q04734 239 aa2.36□□□□□ -2.03
NFI1YOR156C YLR053CQ12026 108 aa2.36□□□□□ -2.03
NFI1YOR156C QCR2P07257 368 aa2.36□□□□□ -2.03
NFI1YOR156C NSE4P43124 402 aa2.36□□□□□ -2.03
NFI1YOR156C VMA10P48836 114 aaKnown RBP2.36□□□□□ -2.03
NFI1YOR156C DDP1Q99321 188 aaKnown RBP2.36□□□□□ -2.03
NFI1YOR156C AQY2P0CD90 149 aa2.35□□□□□ -2.03
NFI1YOR156C SPC2Q04969 178 aa2.35□□□□□ -2.03
NFI1YOR156C UIP4Q08926 304 aa2.35□□□□□ -2.03
NFI1YOR156C ATG41Q12048 136 aa2.35□□□□□ -2.03
NFI1YOR156C OCA6Q12454 224 aa2.35□□□□□ -2.03
NFI1YOR156C YER137CP40083 148 aaKnown RBP2.34□□□□□ -2.03
NFI1YOR156C YGL101WP53144 215 aa2.34□□□□□ -2.03
NFI1YOR156C TMA20P89886 181 aaPredicted RBP2.34□□□□□ -2.03
NFI1YOR156C YBL010CP32788 280 aa2.34□□□□□ -2.04
NFI1YOR156C UPS3Q04006 179 aa2.34□□□□□ -2.04
NFI1YOR156C SPC24Q04477 213 aa2.34□□□□□ -2.04
NFI1YOR156C YPD1Q07688 167 aa2.34□□□□□ -2.04
NFI1YOR156C YEL028WP39989 153 aa2.33□□□□□ -2.04
NFI1YOR156C GLR1P41921 483 aaKnown RBP2.33□□□□□ -2.04
NFI1YOR156C YRF1-3P0CX14 1859 aa2.33□□□□□ -2.04
NFI1YOR156C YRF1-7P0CX15 1859 aa2.33□□□□□ -2.04
NFI1YOR156C YRF1-6P53819 1859 aa2.33□□□□□ -2.04
NFI1YOR156C ACC1Q00955 2233 aaKnown RBP2.33□□□□□ -2.04
NFI1YOR156C RPL22AP05749 121 aaKnown RBP2.33□□□□□ -2.04
NFI1YOR156C RAD6P06104 172 aa2.33□□□□□ -2.04
NFI1YOR156C UBI4P0CG63 381 aaKnown RBP2.33□□□□□ -2.04
NFI1YOR156C YRA2P36036 203 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
NFI1YOR156C YGL235WP53071 178 aa2.33□□□□□ -2.04
NFI1YOR156C COA4Q05809 96 aa2.33□□□□□ -2.04
NFI1YOR156C RTR2Q12378 196 aa2.33□□□□□ -2.04
NFI1YOR156C STF2P16965 84 aa2.32□□□□□ -2.04
NFI1YOR156C MAK31P23059 88 aa2.32□□□□□ -2.04
NFI1YOR156C YEL073CP39974 107 aa2.32□□□□□ -2.04
NFI1YOR156C CIN5P40917 295 aa2.32□□□□□ -2.04
NFI1YOR156C SYM1Q06563 197 aa2.32□□□□□ -2.04
NFI1YOR156C YLR422WQ06409 1932 aa2.31□□□□□ -2.04
NFI1YOR156C RIM15P43565 1770 aa2.31□□□□□ -2.04
NFI1YOR156C CCS1P40202 249 aaKnown RBP2.31□□□□□ -2.04
NFI1YOR156C LSM1P47017 172 aaKnown RBP2.31□□□□□ -2.04
NFI1YOR156C GRX5Q02784 150 aa2.31□□□□□ -2.04
NFI1YOR156C YGL041W-AP0C5N3 154 aa2.3□□□□□ -2.04
NFI1YOR156C CUP1-1P0CX80 61 aa2.3□□□□□ -2.04
NFI1YOR156C CUP1-2P0CX81 61 aa2.3□□□□□ -2.04
NFI1YOR156C PHO13P19881 312 aa2.3□□□□□ -2.04
NFI1YOR156C LSM8P47093 109 aaKnown RBP2.3□□□□□ -2.04
NFI1YOR156C HPM1P40481 377 aa2.3□□□□□ -2.04
NFI1YOR156C ELP6Q04868 273 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms