RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W YGL193CP53097 103 aa2.31□□□□□ -2.04
CTK1YKL139W IGO1P53897 168 aa2.31□□□□□ -2.04
CTK1YKL139W UPS2P35200 230 aa2.3□□□□□ -2.04
CTK1YKL139W GRX5Q02784 150 aa2.3□□□□□ -2.04
CTK1YKL139W DML1Q03652 475 aa2.3□□□□□ -2.04
CTK1YKL139W YLR162WQ06235 118 aa2.3□□□□□ -2.04
CTK1YKL139W YHR007C-AQ07074 71 aa2.3□□□□□ -2.04
CTK1YKL139W MDM35O60200 86 aa2.29□□□□□ -2.04
CTK1YKL139W UPS3Q04006 179 aa2.29□□□□□ -2.04
CTK1YKL139W UPS1Q05776 175 aa2.29□□□□□ -2.04
CTK1YKL139W CSI2Q08054 341 aa2.29□□□□□ -2.04
CTK1YKL139W ATG41Q12048 136 aa2.29□□□□□ -2.04
CTK1YKL139W YER181CP40097 107 aa2.28□□□□□ -2.04
CTK1YKL139W NSE4P43124 402 aa2.28□□□□□ -2.04
CTK1YKL139W LIP1Q03579 150 aa2.28□□□□□ -2.04
CTK1YKL139W YDR391CQ04170 232 aa2.28□□□□□ -2.04
CTK1YKL139W YDR102CQ03864 110 aa2.27□□□□□ -2.05
CTK1YKL139W YHP1Q04116 353 aa2.27□□□□□ -2.05
CTK1YKL139W YJL218WP40892 196 aaKnown RBP2.27□□□□□ -2.05
CTK1YKL139W PAC10P48363 199 aa2.27□□□□□ -2.05
CTK1YKL139W YMR320WQ04897 101 aa2.27□□□□□ -2.05
CTK1YKL139W YPD1Q07688 167 aa2.27□□□□□ -2.05
CTK1YKL139W YOL162WP0CF19 215 aa2.26□□□□□ -2.05
CTK1YKL139W SPT14P32363 452 aa2.26□□□□□ -2.05
CTK1YKL139W YRA2P36036 203 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
CTK1YKL139W YGR201CP42936 225 aa2.26□□□□□ -2.05
CTK1YKL139W ALB1P47019 175 aaPredicted RBP2.26□□□□□ -2.05
CTK1YKL139W YNR064CP53750 290 aa2.26□□□□□ -2.05
CTK1YKL139W HRD1Q08109 551 aa2.26□□□□□ -2.05
CTK1YKL139W STF2P16965 84 aa2.25□□□□□ -2.05
CTK1YKL139W MPM1P40364 252 aa2.25□□□□□ -2.05
CTK1YKL139W RBL2P48606 106 aaKnown RBP2.25□□□□□ -2.05
CTK1YKL139W YPR114WQ06107 315 aa2.25□□□□□ -2.05
CTK1YKL139W KOG1P38873 1557 aa2.25□□□□□ -2.05
CTK1YKL139W QCR8P08525 94 aa2.24□□□□□ -2.05
CTK1YKL139W PHO13P19881 312 aa2.24□□□□□ -2.05
CTK1YKL139W CYC2P38909 366 aa2.24□□□□□ -2.05
CTK1YKL139W MOB1P40484 314 aa2.24□□□□□ -2.05
CTK1YKL139W ATG10Q07879 167 aa2.24□□□□□ -2.05
CTK1YKL139W YLR422WQ06409 1932 aa2.24□□□□□ -2.05
CTK1YKL139W DUR1,2P32528 1835 aaKnown RBP2.24□□□□□ -2.05
CTK1YKL139W MRPL24P36525 258 aaPredicted RBP2.23□□□□□ -2.05
CTK1YKL139W YEL067CP39978 195 aa2.23□□□□□ -2.05
CTK1YKL139W RPL13BP40212 199 aaKnown RBP2.23□□□□□ -2.05
CTK1YKL139W SPC2Q04969 178 aa2.23□□□□□ -2.05
CTK1YKL139W UIP4Q08926 304 aa2.23□□□□□ -2.05
CTK1YKL139W RPL13AQ12690 199 aaPredicted RBP2.23□□□□□ -2.05
CTK1YKL139W FAS1P07149 2051 aaKnown RBP2.23□□□□□ -2.05
CTK1YKL139W GPA2P10823 449 aa2.23□□□□□ -2.05
CTK1YKL139W RPB7P34087 171 aa2.23□□□□□ -2.05
CTK1YKL139W YPT31P38555 223 aaKnown RBP2.23□□□□□ -2.05
CTK1YKL139W CCS1P40202 249 aaKnown RBP2.23□□□□□ -2.05
CTK1YKL139W RIB3Q99258 208 aa2.23□□□□□ -2.05
CTK1YKL139W MAK31P23059 88 aa2.22□□□□□ -2.05
CTK1YKL139W MRS4P23500 304 aa2.22□□□□□ -2.05
CTK1YKL139W HPA3P39979 161 aa2.22□□□□□ -2.05
CTK1YKL139W GIM4P40005 111 aaKnown RBP2.22□□□□□ -2.05
CTK1YKL139W YGL204CP53089 101 aa2.22□□□□□ -2.05
CTK1YKL139W YML079WQ03629 201 aa2.22□□□□□ -2.05
CTK1YKL139W ELP6Q04868 273 aa2.22□□□□□ -2.05
CTK1YKL139W FLX1P40464 311 aa2.21□□□□□ -2.06
CTK1YKL139W HYR1P40581 163 aaKnown RBP2.21□□□□□ -2.06
CTK1YKL139W YGR042WP53227 271 aa2.21□□□□□ -2.06
CTK1YKL139W YDL241WQ07738 123 aa2.21□□□□□ -2.06
CTK1YKL139W YGL010WP25338 174 aa2.2□□□□□ -2.06
CTK1YKL139W POP7P38291 140 aa2.2□□□□□ -2.06
CTK1YKL139W YDR366CP87287 132 aa2.2□□□□□ -2.06
CTK1YKL139W COF1Q03048 143 aaKnown RBP2.2□□□□□ -2.06
CTK1YKL139W YMR030W-AQ3E760 96 aa2.2□□□□□ -2.06
CTK1YKL139W TAF2P23255 1407 aa2.19□□□□□ -2.06
CTK1YKL139W SPS2P08459 502 aa2.19□□□□□ -2.06
CTK1YKL139W INO4P13902 151 aa2.19□□□□□ -2.06
CTK1YKL139W YGR269WP40326 108 aa2.19□□□□□ -2.06
CTK1YKL139W GPI2P46961 280 aa2.19□□□□□ -2.06
CTK1YKL139W YAE1P47118 141 aaPredicted RBP2.19□□□□□ -2.06
CTK1YKL139W EST3Q03096 181 aa2.19□□□□□ -2.06
CTK1YKL139W RCE1Q03530 315 aa2.19□□□□□ -2.06
CTK1YKL139W YNL146C-AQ3E7Z1 64 aa2.19□□□□□ -2.06
CTK1YKL139W SEN2P16658 377 aa2.19□□□□□ -2.06
CTK1YKL139W YBL010CP32788 280 aa2.19□□□□□ -2.06
CTK1YKL139W BAT2P47176 376 aaKnown RBP2.19□□□□□ -2.06
CTK1YKL139W CSN9Q03981 162 aa2.19□□□□□ -2.06
CTK1YKL139W DDR48P18899 430 aaKnown RBP2.18□□□□□ -2.06
CTK1YKL139W HHO1P53551 258 aa2.18□□□□□ -2.06
CTK1YKL139W CWC27Q02770 301 aa2.18□□□□□ -2.06
CTK1YKL139W YMR252CQ04814 134 aa2.18□□□□□ -2.06
CTK1YKL139W RRT7Q07829 113 aa2.18□□□□□ -2.06
CTK1YKL139W YDL157CQ12082 118 aa2.18□□□□□ -2.06
CTK1YKL139W HSP12P22943 109 aaKnown RBP2.17□□□□□ -2.06
CTK1YKL139W SRP21P32342 167 aa2.17□□□□□ -2.06
CTK1YKL139W GEP7P53171 287 aa2.17□□□□□ -2.06
CTK1YKL139W RFU1Q08003 200 aa2.17□□□□□ -2.06
CTK1YKL139W ADE6P38972 1358 aaKnown RBP2.16□□□□□ -2.06
CTK1YKL139W ETR1P38071 380 aa2.16□□□□□ -2.06
CTK1YKL139W YEL008WP40001 126 aa2.16□□□□□ -2.06
CTK1YKL139W CIN5P40917 295 aa2.16□□□□□ -2.06
CTK1YKL139W TOM1Q03280 3268 aa2.16□□□□□ -2.06
CTK1YKL139W FPR1P20081 114 aaKnown RBP2.15□□□□□ -2.06
CTK1YKL139W SUI1P32911 108 aaKnown RBP2.15□□□□□ -2.06
CTK1YKL139W PHB1P40961 287 aa2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms