RNA–Protein interactions for RNA: YMR287C

DSS1, Transcript of 3'-5' exoribonuclease, yeastyeast

Gene DSS1, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DSS1YMR287C YLR046CQ12253 270 aa2.18□□□□□ -2.06
DSS1YMR287C RRT1P38192 103 aa2.18□□□□□ -2.06
DSS1YMR287C YHL018WP38744 120 aaPredicted RBP2.18□□□□□ -2.06
DSS1YMR287C EFM5P53200 248 aaKnown RBP2.18□□□□□ -2.06
DSS1YMR287C BUD25P85052 153 aa2.18□□□□□ -2.06
DSS1YMR287C RAD28Q12021 506 aa2.18□□□□□ -2.06
DSS1YMR287C MDH2P22133 377 aa2.18□□□□□ -2.06
DSS1YMR287C YDC1Q02896 317 aa2.18□□□□□ -2.06
DSS1YMR287C GAL83Q04739 417 aa2.18□□□□□ -2.06
DSS1YMR287C EFG1Q3E705 233 aaKnown RBP2.18□□□□□ -2.06
DSS1YMR287C TMA19P35691 167 aaKnown RBP2.17□□□□□ -2.06
DSS1YMR287C PAM17P36147 197 aa2.17□□□□□ -2.06
DSS1YMR287C YBR219CP38317 127 aa2.17□□□□□ -2.06
DSS1YMR287C ERG25P53045 309 aa2.17□□□□□ -2.06
DSS1YMR287C SHH3Q04487 196 aa2.17□□□□□ -2.06
DSS1YMR287C YPR202WQ08993 238 aa2.17□□□□□ -2.06
DSS1YMR287C YLR053CQ12026 108 aa2.17□□□□□ -2.06
DSS1YMR287C SEC14P24280 304 aaKnown RBP2.16□□□□□ -2.06
DSS1YMR287C YMR253CQ04835 414 aa2.16□□□□□ -2.06
DSS1YMR287C SEN2P16658 377 aa2.15□□□□□ -2.06
DSS1YMR287C DIG2Q03373 323 aaKnown RBP2.15□□□□□ -2.06
DSS1YMR287C CUE4Q04201 117 aaPredicted RBP2.15□□□□□ -2.06
DSS1YMR287C PEX11Q12462 236 aa2.15□□□□□ -2.06
DSS1YMR287C TFC1P32367 649 aa2.15□□□□□ -2.07
DSS1YMR287C MPA43P53583 542 aaPredicted RBP2.15□□□□□ -2.07
DSS1YMR287C YDR102CQ03864 110 aa2.15□□□□□ -2.07
DSS1YMR287C YPL073CP40323 161 aa2.14□□□□□ -2.07
DSS1YMR287C YGL101WP53144 215 aa2.14□□□□□ -2.07
DSS1YMR287C YOR214CQ12282 236 aa2.14□□□□□ -2.07
DSS1YMR287C RPL2AP0CX45 254 aaKnown RBP2.14□□□□□ -2.07
DSS1YMR287C RPL2BP0CX46 254 aaKnown RBP2.14□□□□□ -2.07
DSS1YMR287C YBR220CP38318 560 aa2.14□□□□□ -2.07
DSS1YMR287C NSA2P40078 261 aaKnown RBP2.14□□□□□ -2.07
DSS1YMR287C QCR2P07257 368 aa2.14□□□□□ -2.07
DSS1YMR287C YOL162WP0CF19 215 aa2.14□□□□□ -2.07
DSS1YMR287C AIM2P39721 246 aa2.14□□□□□ -2.07
DSS1YMR287C XPT1P47165 209 aa2.14□□□□□ -2.07
DSS1YMR287C YPR014CQ6B0W2 109 aa2.14□□□□□ -2.07
DSS1YMR287C DER1P38307 211 aa2.13□□□□□ -2.07
DSS1YMR287C FLX1P40464 311 aa2.13□□□□□ -2.07
DSS1YMR287C YGL235WP53071 178 aa2.13□□□□□ -2.07
DSS1YMR287C SAY1P53324 424 aa2.13□□□□□ -2.07
DSS1YMR287C CMD1P06787 147 aaKnown RBP2.12□□□□□ -2.07
DSS1YMR287C YAE1P47118 141 aaPredicted RBP2.12□□□□□ -2.07
DSS1YMR287C NSP1P14907 823 aaKnown RBP2.12□□□□□ -2.07
DSS1YMR287C FIG1P38224 298 aa2.12□□□□□ -2.07
DSS1YMR287C DML1Q03652 475 aa2.12□□□□□ -2.07
DSS1YMR287C RIM9Q04734 239 aa2.12□□□□□ -2.07
DSS1YMR287C YMR252CQ04814 134 aa2.12□□□□□ -2.07
DSS1YMR287C YHP1Q04116 353 aa2.11□□□□□ -2.07
DSS1YMR287C FIT2Q08906 153 aa2.11□□□□□ -2.07
DSS1YMR287C YPR013CQ12145 317 aa2.11□□□□□ -2.07
DSS1YMR287C COX8P04039 78 aa2.11□□□□□ -2.07
DSS1YMR287C YEL008WP40001 126 aa2.11□□□□□ -2.07
DSS1YMR287C NQM1P53228 333 aaPredicted RBP2.11□□□□□ -2.07
DSS1YMR287C YGL010WP25338 174 aa2.11□□□□□ -2.07
DSS1YMR287C AQY2P0CD90 149 aa2.1□□□□□ -2.07
DSS1YMR287C YEL028WP39989 153 aa2.1□□□□□ -2.07
DSS1YMR287C UPS1Q05776 175 aa2.1□□□□□ -2.07
DSS1YMR287C MDM35O60200 86 aa2.1□□□□□ -2.07
DSS1YMR287C HSP30P25619 332 aa2.1□□□□□ -2.07
DSS1YMR287C ACP1P32463 125 aa2.1□□□□□ -2.07
DSS1YMR287C NSE4P43124 402 aa2.1□□□□□ -2.07
DSS1YMR287C MOG1P47123 218 aa2.1□□□□□ -2.07
DSS1YMR287C YKR005CQ02203 525 aa2.1□□□□□ -2.07
DSS1YMR287C YLR422WQ06409 1932 aa2.1□□□□□ -2.07
DSS1YMR287C FLO9P39712 1322 aa2.09□□□□□ -2.07
DSS1YMR287C MRS4P23500 304 aa2.09□□□□□ -2.07
DSS1YMR287C GLR1P41921 483 aaKnown RBP2.09□□□□□ -2.07
DSS1YMR287C FIP1P45976 327 aa2.09□□□□□ -2.07
DSS1YMR287C PLP1Q04004 230 aa2.09□□□□□ -2.07
DSS1YMR287C NUF2P33895 451 aa2.09□□□□□ -2.08
DSS1YMR287C HPA3P39979 161 aa2.09□□□□□ -2.08
DSS1YMR287C APQ12P40532 138 aa2.09□□□□□ -2.08
DSS1YMR287C YFH7P43591 353 aa2.09□□□□□ -2.08
DSS1YMR287C PAC10P48363 199 aa2.09□□□□□ -2.08
DSS1YMR287C PRP11Q07350 266 aaPredicted RBP2.09□□□□□ -2.08
DSS1YMR287C PET20Q99373 253 aa2.09□□□□□ -2.08
DSS1YMR287C CDC39P25655 2108 aaKnown RBP2.09□□□□□ -2.08
DSS1YMR287C LSM3P57743 89 aaKnown RBP2.08□□□□□ -2.08
DSS1YMR287C YPR174CQ06616 221 aaPredicted RBP2.08□□□□□ -2.08
DSS1YMR287C BAT2P47176 376 aaKnown RBP2.08□□□□□ -2.08
DSS1YMR287C YMR320WQ04897 101 aa2.08□□□□□ -2.08
DSS1YMR287C SYM1Q06563 197 aa2.08□□□□□ -2.08
DSS1YMR287C INO4P13902 151 aa2.07□□□□□ -2.08
DSS1YMR287C MAK31P23059 88 aa2.07□□□□□ -2.08
DSS1YMR287C YRA2P36036 203 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
DSS1YMR287C YEL073CP39974 107 aa2.07□□□□□ -2.08
DSS1YMR287C RPL30P14120 105 aaKnown RBP2.07□□□□□ -2.08
DSS1YMR287C STP22P25604 385 aa2.07□□□□□ -2.08
DSS1YMR287C RPB7P34087 171 aa2.07□□□□□ -2.08
DSS1YMR287C DLS1P40366 167 aa2.07□□□□□ -2.08
DSS1YMR287C CCS1P40202 249 aaKnown RBP2.07□□□□□ -2.08
DSS1YMR287C MSB2P32334 1306 aa2.06□□□□□ -2.08
DSS1YMR287C TVP23P38962 199 aa2.06□□□□□ -2.08
DSS1YMR287C ATG41Q12048 136 aa2.06□□□□□ -2.08
DSS1YMR287C ATP5P09457 212 aa2.06□□□□□ -2.08
DSS1YMR287C RPL13BP40212 199 aaKnown RBP2.06□□□□□ -2.08
DSS1YMR287C YDL241WQ07738 123 aa2.06□□□□□ -2.08
DSS1YMR287C RPL13AQ12690 199 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms