RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C SPO13P23624 291 aa0.6□□□□□ -2.31
UBX4YMR067C YPL073CP40323 161 aa0.6□□□□□ -2.31
UBX4YMR067C ODC2Q99297 307 aa0.6□□□□□ -2.31
UBX4YMR067C TEL1P38110 2787 aa0.6□□□□□ -2.31
UBX4YMR067C MATALPHA1P0CY06 175 aa0.59□□□□□ -2.31
UBX4YMR067C HMLALPHA1P0CY07 175 aa0.59□□□□□ -2.31
UBX4YMR067C MSN4P33749 630 aa0.59□□□□□ -2.31
UBX4YMR067C DAD4P69851 72 aa0.59□□□□□ -2.31
UBX4YMR067C YLR422WQ06409 1932 aa0.59□□□□□ -2.32
UBX4YMR067C IKI3Q06706 1349 aaKnown RBP0.59□□□□□ -2.32
UBX4YMR067C SEN1Q00416 2231 aaKnown RBP0.58□□□□□ -2.32
UBX4YMR067C CKS1P20486 150 aaKnown RBP0.58□□□□□ -2.32
UBX4YMR067C VMA6P32366 345 aaKnown RBP0.58□□□□□ -2.32
UBX4YMR067C ALG13P53178 202 aa0.58□□□□□ -2.32
UBX4YMR067C DGA1Q08650 418 aa0.58□□□□□ -2.32
UBX4YMR067C YFR032C-BQ8TGU2 87 aa0.58□□□□□ -2.32
UBX4YMR067C TOR2P32600 2474 aaKnown RBP0.58□□□□□ -2.32
UBX4YMR067C GCN1P33892 2672 aaKnown RBP0.58□□□□□ -2.32
UBX4YMR067C FMP27Q06179 2628 aa0.57□□□□□ -2.32
UBX4YMR067C UGX2P32772 223 aa0.57□□□□□ -2.32
UBX4YMR067C MGM101P32787 269 aaKnown RBP0.57□□□□□ -2.32
UBX4YMR067C AIM25P47140 327 aa0.57□□□□□ -2.32
UBX4YMR067C UBC12P52491 188 aa0.57□□□□□ -2.32
UBX4YMR067C MPC3P53311 146 aa0.57□□□□□ -2.32
UBX4YMR067C COG5P53951 403 aa0.57□□□□□ -2.32
UBX4YMR067C RRN5Q02983 363 aa0.57□□□□□ -2.32
UBX4YMR067C YDR524C-BQ3E6R4 66 aa0.57□□□□□ -2.32
UBX4YMR067C RPL28P02406 149 aaKnown RBP0.56□□□□□ -2.32
UBX4YMR067C RPL24BP24000 155 aaKnown RBP0.56□□□□□ -2.32
UBX4YMR067C YCL042WP25572 119 aa0.56□□□□□ -2.32
UBX4YMR067C RPB7P34087 171 aa0.56□□□□□ -2.32
UBX4YMR067C TVP23P38962 199 aa0.56□□□□□ -2.32
UBX4YMR067C YEL008WP40001 126 aa0.56□□□□□ -2.32
UBX4YMR067C YLR460CP54007 376 aa0.56□□□□□ -2.32
UBX4YMR067C YNG1Q08465 219 aa0.56□□□□□ -2.32
UBX4YMR067C COA3Q3E7B2 85 aa0.56□□□□□ -2.32
UBX4YMR067C PRP8P33334 2413 aaKnown RBP0.56□□□□□ -2.32
UBX4YMR067C IRA1P18963 3092 aa0.55□□□□□ -2.32
UBX4YMR067C UTP20P35194 2493 aaKnown RBP0.55□□□□□ -2.32
UBX4YMR067C BRR2P32639 2163 aaKnown RBP0.55□□□□□ -2.32
UBX4YMR067C RPL25P04456 142 aaKnown RBP0.55□□□□□ -2.32
UBX4YMR067C RHO1P06780 209 aaKnown RBP0.55□□□□□ -2.32
UBX4YMR067C GCN3P14741 305 aa0.55□□□□□ -2.32
UBX4YMR067C YMR31P19955 123 aa0.55□□□□□ -2.32
UBX4YMR067C PRX1P34227 261 aaKnown RBP0.55□□□□□ -2.32
UBX4YMR067C RTR1P40084 226 aaPredicted RBP0.55□□□□□ -2.32
UBX4YMR067C LSM7P53905 115 aaKnown RBP0.55□□□□□ -2.32
UBX4YMR067C YHR214C-EQ8TGK0 99 aa0.55□□□□□ -2.32
UBX4YMR067C SEY1Q99287 776 aa0.55□□□□□ -2.32
UBX4YMR067C UBC8P28263 218 aa0.54□□□□□ -2.32
UBX4YMR067C MRPL15P36523 253 aa0.54□□□□□ -2.32
UBX4YMR067C YHL018WP38744 120 aaPredicted RBP0.54□□□□□ -2.32
UBX4YMR067C PDR17P53844 350 aa0.54□□□□□ -2.32
UBX4YMR067C YDR391CQ04170 232 aa0.54□□□□□ -2.32
UBX4YMR067C HNT1Q04344 158 aaKnown RBP0.54□□□□□ -2.32
UBX4YMR067C PRP11Q07350 266 aaPredicted RBP0.54□□□□□ -2.32
UBX4YMR067C IRA2P19158 3079 aa0.54□□□□□ -2.32
UBX4YMR067C THP2O13539 261 aaKnown RBP0.53□□□□□ -2.32
UBX4YMR067C OCH1P31755 480 aa0.53□□□□□ -2.32
UBX4YMR067C MIC12P38341 106 aa0.53□□□□□ -2.32
UBX4YMR067C MOB1P40484 314 aa0.53□□□□□ -2.32
UBX4YMR067C YRB1P41920 201 aaKnown RBP0.53□□□□□ -2.32
UBX4YMR067C IRC18P47056 224 aa0.53□□□□□ -2.32
UBX4YMR067C GET1P53192 235 aa0.53□□□□□ -2.32
UBX4YMR067C DIG2Q03373 323 aaKnown RBP0.53□□□□□ -2.32
UBX4YMR067C UPS3Q04006 179 aa0.53□□□□□ -2.32
UBX4YMR067C JLP1Q12358 412 aa0.53□□□□□ -2.32
UBX4YMR067C SAC3P46674 1301 aa0.53□□□□□ -2.32
UBX4YMR067C STT4P37297 1900 aa0.52□□□□□ -2.33
UBX4YMR067C SEC16P48415 2195 aaKnown RBP0.52□□□□□ -2.33
UBX4YMR067C POR1P04840 283 aaKnown RBP0.52□□□□□ -2.33
UBX4YMR067C RPL43AP0CX25 92 aaKnown RBP0.52□□□□□ -2.33
UBX4YMR067C RPL43BP0CX26 92 aa0.52□□□□□ -2.33
UBX4YMR067C PHO85P17157 305 aa0.52□□□□□ -2.33
UBX4YMR067C PAN3P36102 679 aaPredicted RBP0.52□□□□□ -2.33
UBX4YMR067C HMF1P40037 129 aaKnown RBP0.52□□□□□ -2.33
UBX4YMR067C YER085CP40058 173 aa0.52□□□□□ -2.33
UBX4YMR067C MGA1P53050 456 aa0.52□□□□□ -2.33
UBX4YMR067C PET191Q02772 108 aa0.52□□□□□ -2.33
UBX4YMR067C BNA7Q04066 261 aa0.52□□□□□ -2.33
UBX4YMR067C POL2P21951 2222 aaKnown RBP0.52□□□□□ -2.33
UBX4YMR067C CSF1Q12150 2958 aa0.51□□□□□ -2.33
UBX4YMR067C YBR121C-AP0C5L4 52 aa0.51□□□□□ -2.33
UBX4YMR067C RTC3P38804 111 aaPredicted RBP0.51□□□□□ -2.33
UBX4YMR067C YMR321CQ04898 105 aa0.51□□□□□ -2.33
UBX4YMR067C DYN3Q04949 312 aa0.51□□□□□ -2.33
UBX4YMR067C YMR226CQ05016 267 aaKnown RBP0.51□□□□□ -2.33
UBX4YMR067C YPR203WQ08994 102 aa0.51□□□□□ -2.33
UBX4YMR067C FMP49A0A023PZB3 126 aa0.5□□□□□ -2.33
UBX4YMR067C COX8P04039 78 aa0.5□□□□□ -2.33
UBX4YMR067C YCR090CP25654 182 aaKnown RBP0.5□□□□□ -2.33
UBX4YMR067C PPA2P28239 310 aa0.5□□□□□ -2.33
UBX4YMR067C TRM5P38793 499 aa0.5□□□□□ -2.33
UBX4YMR067C ALB1P47019 175 aaPredicted RBP0.5□□□□□ -2.33
UBX4YMR067C ADO1P47143 340 aaKnown RBP0.5□□□□□ -2.33
UBX4YMR067C IRC23Q08416 157 aa0.5□□□□□ -2.33
UBX4YMR067C YOR097CQ12274 175 aaPredicted RBP0.5□□□□□ -2.33
UBX4YMR067C YKL183C-AQ3E765 70 aa0.5□□□□□ -2.33
UBX4YMR067C YIL046W-AQ3E7Z4 54 aa0.5□□□□□ -2.33
UBX4YMR067C UBR1P19812 1950 aa0.5□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 88.3 ms