RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC22	YLR268W	SOK1	P40317	901 aa		0.92	□□□□□ -2.26
SEC22	YLR268W	POG1	P40473	351 aa		0.92	□□□□□ -2.26
SEC22	YLR268W	YFL065C	P43539	102 aa		0.92	□□□□□ -2.26
SEC22	YLR268W	GPI14	P47088	403 aa	Known RBP	0.92	□□□□□ -2.26
SEC22	YLR268W	UPS3	Q04006	179 aa		0.92	□□□□□ -2.26
SEC22	YLR268W	HPT1	Q04178	221 aa	Known RBP	0.92	□□□□□ -2.26
SEC22	YLR268W	ATG38	Q05789	226 aa	Known RBP	0.92	□□□□□ -2.26
SEC22	YLR268W	AQY2	P0CD90	149 aa		0.91	□□□□□ -2.26
SEC22	YLR268W	SEC14	P24280	304 aa	Known RBP	0.91	□□□□□ -2.26
SEC22	YLR268W	STP22	P25604	385 aa		0.91	□□□□□ -2.26
SEC22	YLR268W	TRR1	P29509	319 aa	Known RBP	0.91	□□□□□ -2.26
SEC22	YLR268W	YKR041W	P36134	250 aa		0.91	□□□□□ -2.26
SEC22	YLR268W	SEC72	P39742	193 aa	Known RBP	0.91	□□□□□ -2.26
SEC22	YLR268W	YOR015W	Q12169	119 aa		0.91	□□□□□ -2.26
SEC22	YLR268W	DGK1	Q12382	290 aa		0.91	□□□□□ -2.26
SEC22	YLR268W	YHR212W-A	P0CX91	67 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	YCR023C	P25351	611 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	YCL042W	P25572	119 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	YKL102C	P34249	101 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	CLG1	P35190	452 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	EGD2	P38879	174 aa	Known RBP	0.9	□□□□□ -2.27
SEC22	YLR268W	YEL067C	P39978	195 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	YEL008W	P40001	126 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	RFC2	P40348	353 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	SBH1	P52870	82 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	PIR1	Q03178	341 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	RRP17	Q04031	235 aa	Predicted RBP	0.9	□□□□□ -2.27
SEC22	YLR268W	GPI17	Q04080	534 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	GRE1	Q08969	168 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	DAS2	Q12084	232 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	ATP20	Q12233	115 aa		0.9	□□□□□ -2.27
SEC22	YLR268W	STF2	P16965	84 aa		0.89	□□□□□ -2.27
SEC22	YLR268W	MAK5	P38112	773 aa	Predicted RBP	0.89	□□□□□ -2.27
SEC22	YLR268W	RRT1	P38192	103 aa		0.89	□□□□□ -2.27
SEC22	YLR268W	JAC1	P53193	184 aa		0.89	□□□□□ -2.27
SEC22	YLR268W	GRX5	Q02784	150 aa		0.89	□□□□□ -2.27
SEC22	YLR268W	PEX11	Q12462	236 aa		0.89	□□□□□ -2.27
SEC22	YLR268W	CHD1	P32657	1468 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	NSE4	P43124	402 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	YIP3	P53633	176 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	YLR460C	P54007	376 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	VPS28	Q02767	242 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	DML1	Q03652	475 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	YMR007W	Q03675	126 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	GAL83	Q04739	417 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	YPR127W	Q06494	345 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	FYV12	Q08559	129 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	YOR214C	Q12282	236 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	PST2	Q12335	198 aa	Known RBP	0.88	□□□□□ -2.27
SEC22	YLR268W	COA3	Q3E7B2	85 aa		0.88	□□□□□ -2.27
SEC22	YLR268W	HSP30	P25619	332 aa		0.87	□□□□□ -2.27
SEC22	YLR268W	FYV4	P38783	130 aa	Predicted RBP	0.87	□□□□□ -2.27
SEC22	YLR268W	TTI2	P47168	421 aa		0.87	□□□□□ -2.27
SEC22	YLR268W	TIM13	P53299	105 aa		0.87	□□□□□ -2.27
SEC22	YLR268W	PLP1	Q04004	230 aa		0.87	□□□□□ -2.27
SEC22	YLR268W	UPS1	Q05776	175 aa		0.87	□□□□□ -2.27
SEC22	YLR268W	SAC3	P46674	1301 aa		0.87	□□□□□ -2.27
SEC22	YLR268W	RPL35A	P0CX84	120 aa	Known RBP	0.86	□□□□□ -2.27
SEC22	YLR268W	RPL35B	P0CX85	120 aa	Known RBP	0.86	□□□□□ -2.27
SEC22	YLR268W	SEN2	P16658	377 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	RAD51	P25454	400 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	SRP14	P38985	146 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	YNL200C	P40165	246 aa	Known RBP	0.86	□□□□□ -2.27
SEC22	YLR268W	MPM1	P40364	252 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	XPT1	P47165	209 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	SOL1	P50278	321 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	SBH2	P52871	88 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	YKR005C	Q02203	525 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	MET31	Q03081	177 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	YHP1	Q04116	353 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	YDR391C	Q04170	232 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	ATG41	Q12048	136 aa		0.86	□□□□□ -2.27
SEC22	YLR268W	YBL010C	P32788	280 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	CPR5	P35176	225 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	HUA1	P40325	198 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	YGL235W	P53071	178 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	HHT1	P61830	136 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	YLR050C	Q12155	161 aa	Known RBP	0.85	□□□□□ -2.27
SEC22	YLR268W	YMR030W-A	Q3E760	96 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	YOR381W-A	Q3E804	55 aa		0.85	□□□□□ -2.27
SEC22	YLR268W	YLR422W	Q06409	1932 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	MAK31	P23059	88 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	UBC8	P28263	218 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	NUF2	P33895	451 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.84	□□□□□ -2.27	not detected
SEC22	YLR268W	MRPL15	P36523	253 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	CCS1	P40202	249 aa	Known RBP	0.84	□□□□□ -2.27
SEC22	YLR268W	GLR1	P41921	483 aa	Known RBP	0.84	□□□□□ -2.27
SEC22	YLR268W	RPL37A	P49166	88 aa	Known RBP	0.84	□□□□□ -2.27
SEC22	YLR268W	RIM9	Q04734	239 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	ELP6	Q04868	273 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	TAR1	Q8TGM6	124 aa		0.84	□□□□□ -2.27
SEC22	YLR268W	TRM3	Q07527	1436 aa		0.83	□□□□□ -2.28
SEC22	YLR268W	RAD6	P06104	172 aa		0.83	□□□□□ -2.28
SEC22	YLR268W	CMD1	P06787	147 aa	Known RBP	0.83	□□□□□ -2.28
SEC22	YLR268W	ETR1	P38071	380 aa		0.83	□□□□□ -2.28
SEC22	YLR268W	YBR242W	P38331	238 aa		0.83	□□□□□ -2.28
SEC22	YLR268W	MOB1	P40484	314 aa		0.83	□□□□□ -2.28
SEC22	YLR268W	NQM1	P53228	333 aa	Predicted RBP	0.83	□□□□□ -2.28
SEC22	YLR268W	YNL140C	P53910	189 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms