RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W OST2P46964 130 aa1.82□□□□□ -2.12
NUP100YKL068W CAB4P53332 305 aa1.82□□□□□ -2.12
NUP100YKL068W VHS1Q03785 461 aa1.82□□□□□ -2.12
NUP100YKL068W ERP1Q05359 219 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W MRX8Q05473 314 aa1.82□□□□□ -2.12
NUP100YKL068W YPS3Q12303 508 aa1.82□□□□□ -2.12
NUP100YKL068W TSC3Q3E790 80 aa1.82□□□□□ -2.12
NUP100YKL068W Q0255P03881 472 aa1.82□□□□□ -2.12
NUP100YKL068W YPR170W-BP0C5R9 85 aa1.82□□□□□ -2.12
NUP100YKL068W SPO13P23624 291 aa1.82□□□□□ -2.12
NUP100YKL068W PRE7P23724 241 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W STP22P25604 385 aa1.82□□□□□ -2.12
NUP100YKL068W LSM12P38828 187 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W YFR054CP43622 192 aa1.82□□□□□ -2.12
NUP100YKL068W CLD1P53264 445 aa1.82□□□□□ -2.12
NUP100YKL068W SWT21P53873 357 aaPredicted RBP1.82□□□□□ -2.12
NUP100YKL068W YNL010WP53981 241 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W COF1Q03048 143 aaKnown RBP1.82□□□□□ -2.12
NUP100YKL068W YPL039WQ03080 316 aa1.82□□□□□ -2.12
NUP100YKL068W YDR115WQ04598 105 aa1.82□□□□□ -2.12
NUP100YKL068W TIM22Q12328 207 aa1.82□□□□□ -2.12
NUP100YKL068W DDI2P0CH63 225 aa1.81□□□□□ -2.12
NUP100YKL068W DDI3P0CH64 225 aa1.81□□□□□ -2.12
NUP100YKL068W MAG1P22134 296 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W ERG2P32352 222 aa1.81□□□□□ -2.12
NUP100YKL068W YBL081WP38180 368 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W YHI9P38765 294 aa1.81□□□□□ -2.12
NUP100YKL068W YPL073CP40323 161 aa1.81□□□□□ -2.12
NUP100YKL068W YJL028WP47062 111 aa1.81□□□□□ -2.12
NUP100YKL068W PGU1P47180 361 aa1.81□□□□□ -2.12
NUP100YKL068W PGA1P53896 198 aa1.81□□□□□ -2.12
NUP100YKL068W LPP1Q04396 274 aa1.81□□□□□ -2.12
NUP100YKL068W YPL225WQ08971 146 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W YBL112CQ3E7Y4 105 aa1.81□□□□□ -2.12
NUP100YKL068W YPR014CQ6B0W2 109 aa1.81□□□□□ -2.12
NUP100YKL068W TRA1P38811 3744 aa1.81□□□□□ -2.12
NUP100YKL068W SFC1P33303 322 aa1.81□□□□□ -2.12
NUP100YKL068W UTP30P36144 274 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W SHE1P38200 338 aa1.81□□□□□ -2.12
NUP100YKL068W YGL262WP53054 175 aa1.81□□□□□ -2.12
NUP100YKL068W HHO1P53551 258 aa1.81□□□□□ -2.12
NUP100YKL068W ALG9P53868 555 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W RPL21AQ02753 160 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W YMR253CQ04835 414 aa1.81□□□□□ -2.12
NUP100YKL068W NIP7Q08962 181 aaKnown RBP1.81□□□□□ -2.12
NUP100YKL068W YPL264CQ08980 353 aa1.81□□□□□ -2.12
NUP100YKL068W ADH1P00330 348 aaKnown RBP1.8□□□□□ -2.12
NUP100YKL068W PET9P18239 318 aaKnown RBP1.8□□□□□ -2.12
NUP100YKL068W PHO13P19881 312 aa1.8□□□□□ -2.12
NUP100YKL068W MED6P38782 295 aa1.8□□□□□ -2.12
NUP100YKL068W IRC22P40006 225 aa1.8□□□□□ -2.12
NUP100YKL068W AYR1P40471 297 aa1.8□□□□□ -2.12
NUP100YKL068W TIM13P53299 105 aa1.8□□□□□ -2.12
NUP100YKL068W NDD1Q08887 554 aa1.8□□□□□ -2.12
NUP100YKL068W IZH2Q12442 317 aa1.8□□□□□ -2.12
NUP100YKL068W HTL1Q9URQ5 78 aa1.8□□□□□ -2.12
NUP100YKL068W FPR1P20081 114 aaKnown RBP1.8□□□□□ -2.12
NUP100YKL068W MRP49P32388 137 aa1.8□□□□□ -2.12
NUP100YKL068W LHP1P33399 275 aaKnown RBP1.8□□□□□ -2.12
NUP100YKL068W YPT53P36019 220 aa1.8□□□□□ -2.12
NUP100YKL068W SHE2P36068 246 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
NUP100YKL068W PAN3P36102 679 aaPredicted RBP1.8□□□□□ -2.12
NUP100YKL068W VMA7P39111 118 aa1.8□□□□□ -2.12
NUP100YKL068W AVT6P40074 448 aa1.8□□□□□ -2.12
NUP100YKL068W FIP1P45976 327 aa1.8□□□□□ -2.12
NUP100YKL068W RPE1P46969 238 aa1.8□□□□□ -2.12
NUP100YKL068W UFD1P53044 361 aa1.8□□□□□ -2.12
NUP100YKL068W GRH1Q04410 372 aaKnown RBP1.8□□□□□ -2.12
NUP100YKL068W SLD7Q08457 257 aa1.8□□□□□ -2.12
NUP100YKL068W FCY1Q12178 158 aa1.8□□□□□ -2.12
NUP100YKL068W SPT14P32363 452 aa1.8□□□□□ -2.12
NUP100YKL068W ZRT3P34240 503 aa1.8□□□□□ -2.12
NUP100YKL068W FMP46P36141 133 aaKnown RBP1.8□□□□□ -2.12
NUP100YKL068W MRPL17P36528 281 aa1.8□□□□□ -2.12
NUP100YKL068W SNM1P40993 198 aa1.8□□□□□ -2.12
NUP100YKL068W VPS71Q03433 280 aa1.8□□□□□ -2.12
NUP100YKL068W AIM36Q03798 255 aa1.8□□□□□ -2.12
NUP100YKL068W CNL1Q06333 122 aa1.8□□□□□ -2.12
NUP100YKL068W YOL014WQ08110 124 aa1.8□□□□□ -2.12
NUP100YKL068W FYV7Q12247 151 aa1.8□□□□□ -2.12
NUP100YKL068W YDL180WQ12301 547 aa1.8□□□□□ -2.12
NUP100YKL068W DGK1Q12382 290 aa1.8□□□□□ -2.12
NUP100YKL068W PSF1Q12488 208 aa1.8□□□□□ -2.12
NUP100YKL068W YLR099W-AQ3E798 87 aa1.8□□□□□ -2.12
NUP100YKL068W TIR1P10863 254 aa1.79□□□□□ -2.12
NUP100YKL068W RPB5P20434 215 aa1.79□□□□□ -2.12
NUP100YKL068W YBR063CP38083 404 aa1.79□□□□□ -2.12
NUP100YKL068W YER189WP40104 122 aa1.79□□□□□ -2.12
NUP100YKL068W DLS1P40366 167 aa1.79□□□□□ -2.12
NUP100YKL068W YDL211CQ12121 372 aa1.79□□□□□ -2.12
NUP100YKL068W ATG5Q12380 294 aa1.79□□□□□ -2.12
NUP100YKL068W URA2P07259 2214 aaKnown RBP1.79□□□□□ -2.12
NUP100YKL068W SEC17P32602 292 aa1.79□□□□□ -2.12
NUP100YKL068W SNC2P33328 115 aa1.79□□□□□ -2.12
NUP100YKL068W AVT2P39981 480 aa1.79□□□□□ -2.12
NUP100YKL068W PRE5P40302 234 aaKnown RBP1.79□□□□□ -2.12
NUP100YKL068W RPA43P46669 326 aa1.79□□□□□ -2.12
NUP100YKL068W TTI2P47168 421 aa1.79□□□□□ -2.12
NUP100YKL068W COS10P52924 374 aa1.79□□□□□ -2.12
NUP100YKL068W YGL193CP53097 103 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms