RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W TY1A-JR2P47099 440 aa4.42□□□□□ -1.7
SHE10YGL228W TMA23Q03525 211 aa4.42□□□□□ -1.7
SHE10YGL228W TY1A-DR1Q03856 440 aa4.42□□□□□ -1.7
SHE10YGL228W TY1A-ML1Q04706 440 aaKnown RBP4.42□□□□□ -1.7
SHE10YGL228W CTR3Q06686 241 aa4.42□□□□□ -1.7
SHE10YGL228W TY1A-BRQ12217 440 aa4.42□□□□□ -1.7
SHE10YGL228W TY1A-NL2Q12470 440 aa4.42□□□□□ -1.7
SHE10YGL228W TY1A-GR2Q12485 440 aa4.42□□□□□ -1.7
SHE10YGL228W TMA17Q12513 150 aa4.42□□□□□ -1.7
SHE10YGL228W YMR316C-AI2HB70 103 aa4.41□□□□□ -1.7
SHE10YGL228W SRB6P32570 121 aa4.41□□□□□ -1.7
SHE10YGL228W YBL059WP34224 193 aa4.41□□□□□ -1.7
SHE10YGL228W RPL14AP36105 138 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W QDR3P38227 689 aa4.41□□□□□ -1.7
SHE10YGL228W YPT31P38555 223 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W RPL14BP38754 138 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W RTC3P38804 111 aaPredicted RBP4.41□□□□□ -1.7
SHE10YGL228W PUS4P48567 403 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W SSU72P53538 206 aaPredicted RBP4.41□□□□□ -1.7
SHE10YGL228W AVO2Q04749 426 aa4.41□□□□□ -1.7
SHE10YGL228W SDO1Q07953 250 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W TRP4P07285 380 aaPredicted RBP4.41□□□□□ -1.7
SHE10YGL228W PHO85P17157 305 aa4.41□□□□□ -1.7
SHE10YGL228W LDS1P31379 325 aa4.41□□□□□ -1.7
SHE10YGL228W RAD23P32628 398 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W NOP16P40007 231 aaKnown RBP4.41□□□□□ -1.7
SHE10YGL228W YJL163CP46996 555 aa4.41□□□□□ -1.7
SHE10YGL228W POS5Q06892 414 aa4.41□□□□□ -1.7
SHE10YGL228W IRC23Q08416 157 aa4.41□□□□□ -1.7
SHE10YGL228W YER145C-AA0A023PYF4 145 aa4.4□□□□□ -1.71
SHE10YGL228W MRP2P10663 115 aaPredicted RBP4.4□□□□□ -1.71
SHE10YGL228W QCR9P22289 66 aa4.4□□□□□ -1.71
SHE10YGL228W RPB9P27999 122 aa4.4□□□□□ -1.71
SHE10YGL228W YPS1P32329 569 aa4.4□□□□□ -1.71
SHE10YGL228W SHB17P36136 271 aaKnown RBP4.4□□□□□ -1.71
SHE10YGL228W RIB5P38145 238 aa4.4□□□□□ -1.71
SHE10YGL228W SHG1P38337 142 aa4.4□□□□□ -1.71
SHE10YGL228W BNA1P47096 177 aa4.4□□□□□ -1.71
SHE10YGL228W SNO1Q03144 224 aa4.4□□□□□ -1.71
SHE10YGL228W SHH3Q04487 196 aa4.4□□□□□ -1.71
SHE10YGL228W PAA1Q12447 191 aaKnown RBP4.4□□□□□ -1.71
SHE10YGL228W PIS1P06197 220 aaKnown RBP4.39□□□□□ -1.71
SHE10YGL228W TOM40P23644 387 aaKnown RBP4.39□□□□□ -1.71
SHE10YGL228W DAL3P32459 195 aa4.39□□□□□ -1.71
SHE10YGL228W ECM25P32525 599 aa4.39□□□□□ -1.71
SHE10YGL228W DER1P38307 211 aa4.39□□□□□ -1.71
SHE10YGL228W YAR068WP39564 161 aa4.39□□□□□ -1.71
SHE10YGL228W GPP2P40106 250 aaKnown RBP4.39□□□□□ -1.71
SHE10YGL228W YIL024CP40543 189 aa4.39□□□□□ -1.71
SHE10YGL228W YFL054CP43549 646 aa4.39□□□□□ -1.71
SHE10YGL228W RIB4P50861 169 aaPredicted RBP4.39□□□□□ -1.71
SHE10YGL228W YGR018CP53211 109 aa4.39□□□□□ -1.71
SHE10YGL228W BOR1P53838 576 aa4.39□□□□□ -1.71
SHE10YGL228W YMR253CQ04835 414 aa4.39□□□□□ -1.71
SHE10YGL228W PCC1Q3E833 88 aa4.39□□□□□ -1.71
SHE10YGL228W CNB1P25296 175 aa4.38□□□□□ -1.71
SHE10YGL228W YCR022CP25620 114 aa4.38□□□□□ -1.71
SHE10YGL228W MRPL38P35996 138 aaPredicted RBP4.38□□□□□ -1.71
SHE10YGL228W PTC7P38797 343 aa4.38□□□□□ -1.71
SHE10YGL228W BDH1P39714 382 aa4.38□□□□□ -1.71
SHE10YGL228W SMD3P43321 101 aaKnown RBP4.38□□□□□ -1.71
SHE10YGL228W MIC27P50945 234 aa4.38□□□□□ -1.71
SHE10YGL228W PAU4P53427 120 aa4.38□□□□□ -1.71
SHE10YGL228W PBP4Q07362 185 aaKnown RBP4.38□□□□□ -1.71
SHE10YGL228W RXT3Q07458 294 aa4.38□□□□□ -1.71
SHE10YGL228W RKI1Q12189 258 aa4.38□□□□□ -1.71
SHE10YGL228W SME1Q12330 94 aaPredicted RBP4.38□□□□□ -1.71
SHE10YGL228W MIA40P36046 403 aa4.38□□□□□ -1.71
SHE10YGL228W YBL071CP38185 102 aa4.38□□□□□ -1.71
SHE10YGL228W TAX4P47030 604 aa4.38□□□□□ -1.71
SHE10YGL228W LST7P53237 242 aa4.38□□□□□ -1.71
SHE10YGL228W YAP1802P53309 568 aa4.38□□□□□ -1.71
SHE10YGL228W TIM11P81449 96 aaPredicted RBP4.38□□□□□ -1.71
SHE10YGL228W YML122CQ03207 126 aa4.38□□□□□ -1.71
SHE10YGL228W RAD28Q12021 506 aa4.38□□□□□ -1.71
SHE10YGL228W ILV5P06168 395 aaKnown RBP4.37□□□□□ -1.71
SHE10YGL228W SUA7P29055 345 aaPredicted RBP4.37□□□□□ -1.71
SHE10YGL228W CSH1P38287 376 aa4.37□□□□□ -1.71
SHE10YGL228W RTS2P40962 232 aa4.37□□□□□ -1.71
SHE10YGL228W LOC1P43586 204 aaPredicted RBP4.37□□□□□ -1.71
SHE10YGL228W ATG27P46989 271 aa4.37□□□□□ -1.71
SHE10YGL228W CAF40P53829 373 aa4.37□□□□□ -1.71
SHE10YGL228W SRL1Q08673 210 aa4.37□□□□□ -1.71
SHE10YGL228W YOR352WQ08816 343 aa4.37□□□□□ -1.71
SHE10YGL228W DFR1P07807 211 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SHE10YGL228W TY1A-HP0C2I4 478 aaKnown RBP4.36□□□□□ -1.71
SHE10YGL228W TY1A-LR4P0C2I8 440 aaKnown RBP4.36□□□□□ -1.71
SHE10YGL228W PAU1P0CE88 120 aa4.36□□□□□ -1.71
SHE10YGL228W PAU14P0CE89 120 aa4.36□□□□□ -1.71
SHE10YGL228W PAU6P0CE90 120 aa4.36□□□□□ -1.71
SHE10YGL228W PAU18P0CE91 120 aa4.36□□□□□ -1.71
SHE10YGL228W PAU8P0CE92 120 aa4.36□□□□□ -1.71
SHE10YGL228W PAU11P0CE93 120 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-DR6P0CX70 440 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-ER1P0CX71 440 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-LR2P0CX72 440 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-PLP0CX73 440 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-JR1P0CX74 440 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-LR3P0CX75 440 aa4.36□□□□□ -1.71
SHE10YGL228W TY1A-ML2P0CX76 440 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms