RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C MSI1P13712 422 aa2.69□□□□□ -1.98
CDC40YDR364C STF2P16965 84 aa2.69□□□□□ -1.98
CDC40YDR364C APA2P22108 325 aa2.69□□□□□ -1.98
CDC40YDR364C ATG15P25641 520 aa2.69□□□□□ -1.98
CDC40YDR364C PEX4P29340 183 aa2.69□□□□□ -1.98
CDC40YDR364C MRPL27P36526 146 aaPredicted RBP2.69□□□□□ -1.98
CDC40YDR364C POP8P38208 133 aa2.69□□□□□ -1.98
CDC40YDR364C FIG1P38224 298 aa2.69□□□□□ -1.98
CDC40YDR364C COS8P38723 381 aa2.69□□□□□ -1.98
CDC40YDR364C PET8P38921 284 aa2.69□□□□□ -1.98
CDC40YDR364C ERG28P40030 148 aa2.69□□□□□ -1.98
CDC40YDR364C YNL194CP40169 301 aa2.69□□□□□ -1.98
CDC40YDR364C SWM2P40342 146 aa2.69□□□□□ -1.98
CDC40YDR364C FLX1P40464 311 aa2.69□□□□□ -1.98
CDC40YDR364C EGT2P42835 1041 aa2.69□□□□□ -1.98
CDC40YDR364C YFR057WP43625 151 aa2.69□□□□□ -1.98
CDC40YDR364C HAM1P47119 197 aaKnown RBP2.69□□□□□ -1.98
CDC40YDR364C SIP18P50263 79 aa2.69□□□□□ -1.98
CDC40YDR364C UFD1P53044 361 aa2.69□□□□□ -1.98
CDC40YDR364C HHT1P61830 136 aa2.69□□□□□ -1.98
CDC40YDR364C YDR248CQ03786 193 aa2.69□□□□□ -1.98
CDC40YDR364C YDR391CQ04170 232 aa2.69□□□□□ -1.98
CDC40YDR364C DPP1Q05521 289 aa2.69□□□□□ -1.98
CDC40YDR364C YPR098CQ06089 161 aa2.69□□□□□ -1.98
CDC40YDR364C YOR186WQ08560 144 aa2.69□□□□□ -1.98
CDC40YDR364C FIT3Q08907 204 aa2.69□□□□□ -1.98
CDC40YDR364C TRA1P38811 3744 aa2.69□□□□□ -1.98
CDC40YDR364C IPP1P00817 287 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C HHF1P02309 103 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C RPL27AP0C2H6 136 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C RPL27BP0C2H7 136 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C RPS23AP0CX29 145 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C RPS23BP0CX30 145 aa2.68□□□□□ -1.98
CDC40YDR364C CKS1P20486 150 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C QRI5P32344 111 aa2.68□□□□□ -1.98
CDC40YDR364C CLB6P32943 380 aa2.68□□□□□ -1.98
CDC40YDR364C RTC3P38804 111 aaPredicted RBP2.68□□□□□ -1.98
CDC40YDR364C PTI1P39927 425 aaPredicted RBP2.68□□□□□ -1.98
CDC40YDR364C YPS5P53057 165 aa2.68□□□□□ -1.98
CDC40YDR364C JAC1P53193 184 aa2.68□□□□□ -1.98
CDC40YDR364C ORM1P53224 222 aa2.68□□□□□ -1.98
CDC40YDR364C MSO1P53604 210 aaKnown RBP2.68□□□□□ -1.98
CDC40YDR364C SYM1Q06563 197 aa2.68□□□□□ -1.98
CDC40YDR364C YNG1Q08465 219 aa2.68□□□□□ -1.98
CDC40YDR364C SCP1Q08873 200 aa2.68□□□□□ -1.98
CDC40YDR364C FEX2Q08991 375 aa2.68□□□□□ -1.98
CDC40YDR364C ATP16Q12165 160 aa2.68□□□□□ -1.98
CDC40YDR364C CDC28P00546 298 aaKnown RBP2.67□□□□□ -1.98
CDC40YDR364C TPI1P00942 248 aaKnown RBP2.67□□□□□ -1.98
CDC40YDR364C RPL25P04456 142 aaKnown RBP2.67□□□□□ -1.98
CDC40YDR364C PUT1P09368 476 aa2.67□□□□□ -1.98
CDC40YDR364C MAG1P22134 296 aaKnown RBP2.67□□□□□ -1.98
CDC40YDR364C IFM1P25038 676 aa2.67□□□□□ -1.98
CDC40YDR364C YCR101CP25607 182 aa2.67□□□□□ -1.98
CDC40YDR364C LDS1P31379 325 aa2.67□□□□□ -1.98
CDC40YDR364C OCH1P31755 480 aa2.67□□□□□ -1.98
CDC40YDR364C CUE1P38428 203 aa2.67□□□□□ -1.98
CDC40YDR364C VMA7P39111 118 aa2.67□□□□□ -1.98
CDC40YDR364C SEN34P39707 275 aa2.67□□□□□ -1.98
CDC40YDR364C NIF3P53081 288 aa2.67□□□□□ -1.98
CDC40YDR364C CRH1P53301 507 aa2.67□□□□□ -1.98
CDC40YDR364C YPL067CQ02754 198 aa2.67□□□□□ -1.98
CDC40YDR364C YDC1Q02896 317 aa2.67□□□□□ -1.98
CDC40YDR364C PIN3Q06449 215 aa2.67□□□□□ -1.98
CDC40YDR364C RRS1Q08746 203 aaKnown RBP2.67□□□□□ -1.98
CDC40YDR364C FEX1Q08913 375 aa2.67□□□□□ -1.98
CDC40YDR364C CSM4Q08955 156 aa2.67□□□□□ -1.98
CDC40YDR364C SNU23Q12368 194 aaPredicted RBP2.67□□□□□ -1.98
CDC40YDR364C RTR2Q12378 196 aa2.67□□□□□ -1.98
CDC40YDR364C YKL183C-AQ3E765 70 aa2.67□□□□□ -1.98
CDC40YDR364C YBR298C-AQ8TGK4 73 aa2.67□□□□□ -1.98
CDC40YDR364C ATG40Q99325 256 aa2.67□□□□□ -1.98
CDC40YDR364C UTP20P35194 2493 aaKnown RBP2.67□□□□□ -1.98
CDC40YDR364C HTB1P02293 131 aaKnown RBP2.66□□□□□ -1.98
CDC40YDR364C HTB2P02294 131 aa2.66□□□□□ -1.98
CDC40YDR364C RPS8AP0CX39 200 aaKnown RBP2.66□□□□□ -1.98
CDC40YDR364C RPS8BP0CX40 200 aaKnown RBP2.66□□□□□ -1.98
CDC40YDR364C SEN2P16658 377 aa2.66□□□□□ -1.98
CDC40YDR364C TRR1P29509 319 aaKnown RBP2.66□□□□□ -1.98
CDC40YDR364C AGA2P32781 87 aa2.66□□□□□ -1.98
CDC40YDR364C YBR220CP38318 560 aa2.66□□□□□ -1.98
CDC40YDR364C LSM12P38828 187 aaKnown RBP2.66□□□□□ -1.98
CDC40YDR364C YIR035CP40579 254 aa2.66□□□□□ -1.98
CDC40YDR364C YFL051CP43552 160 aa2.66□□□□□ -1.98
CDC40YDR364C PRM15Q03262 622 aa2.66□□□□□ -1.98
CDC40YDR364C TSA2Q04120 196 aa2.66□□□□□ -1.98
CDC40YDR364C API2Q04413 109 aa2.66□□□□□ -1.98
CDC40YDR364C UPS1Q05776 175 aa2.66□□□□□ -1.98
CDC40YDR364C PBA1Q05778 276 aa2.66□□□□□ -1.98
CDC40YDR364C NOC4Q06512 552 aaPredicted RBP2.66□□□□□ -1.98
CDC40YDR364C MHR1Q06630 226 aa2.66□□□□□ -1.98
CDC40YDR364C SME1Q12330 94 aaPredicted RBP2.66□□□□□ -1.98
CDC40YDR364C MPD1Q12404 318 aaKnown RBP2.66□□□□□ -1.98
CDC40YDR364C YGL194C-AQ2V2P6 80 aa2.66□□□□□ -1.98
CDC40YDR364C YBR056W-AI2HB52 66 aa2.65□□□□□ -1.98
CDC40YDR364C RPL28P02406 149 aaKnown RBP2.65□□□□□ -1.98
CDC40YDR364C SEC22P22214 214 aa2.65□□□□□ -1.98
CDC40YDR364C IMP1P28627 190 aa2.65□□□□□ -1.98
CDC40YDR364C YKL187CP34231 750 aa2.65□□□□□ -1.98
CDC40YDR364C PRS3P38689 320 aaKnown RBP2.65□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms