RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SHB17	P36136	271 aa	Known RBP	5.85	□□□□□ -1.47
SKP1	YDR328C	QDR3	P38227	689 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	YJR015W	P47090	510 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	BOR1	P53838	576 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	ARR3	Q06598	404 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	NDE2	Q07500	545 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	POM34	Q12445	299 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	VMA9	Q3E7B6	73 aa		5.85	□□□□□ -1.47
SKP1	YDR328C	ILV5	P06168	395 aa	Known RBP	5.84	□□□□□ -1.47
SKP1	YDR328C	SPO13	P23624	291 aa		5.84	□□□□□ -1.47
SKP1	YDR328C	YBL059W	P34224	193 aa		5.84	□□□□□ -1.47
SKP1	YDR328C	CSH1	P38287	376 aa		5.84	□□□□□ -1.47
SKP1	YDR328C	YPT31	P38555	223 aa	Known RBP	5.84	□□□□□ -1.47
SKP1	YDR328C	GPP2	P40106	250 aa	Known RBP	5.84	□□□□□ -1.47
SKP1	YDR328C	WWM1	P43582	211 aa	Known RBP	5.84	□□□□□ -1.47
SKP1	YDR328C	RIB4	P50861	169 aa	Predicted RBP	5.84	□□□□□ -1.47
SKP1	YDR328C	YAP1802	P53309	568 aa		5.84	□□□□□ -1.47
SKP1	YDR328C	YPL108W	Q02872	168 aa	Predicted RBP	5.84	□□□□□ -1.47
SKP1	YDR328C	ATP16	Q12165	160 aa		5.84	□□□□□ -1.47
SKP1	YDR328C	Q0142	Q9ZZW4	58 aa		5.84	□□□□□ -1.47
SKP1	YDR328C	ECM25	P32525	599 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	SRB6	P32570	121 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	YAR068W	P39564	161 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	SMD3	P43321	101 aa	Known RBP	5.83	□□□□□ -1.48
SKP1	YDR328C	MCM22	P47167	239 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	CAF40	P53829	373 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	ERV25	P54837	211 aa	Known RBP	5.83	□□□□□ -1.48
SKP1	YDR328C	YHP1	Q04116	353 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	AVO2	Q04749	426 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	YOR097C	Q12274	175 aa	Predicted RBP	5.83	□□□□□ -1.48
SKP1	YDR328C	TY1A-DR3	Q12441	440 aa		5.83	□□□□□ -1.48
SKP1	YDR328C	PIS1	P06197	220 aa	Known RBP	5.82	□□□□□ -1.48
SKP1	YDR328C	YCR022C	P25620	114 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	YBL071C	P38185	102 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	BDH1	P39714	382 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	YER188W	P40103	239 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	YIL024C	P40543	189 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	GNP1	P48813	663 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	MIC27	P50945	234 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	YGR018C	P53211	109 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	YMR007W	Q03675	126 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	CTR3	Q06686	241 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	POS5	Q06892	414 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	SRL1	Q08673	210 aa		5.82	□□□□□ -1.48
SKP1	YDR328C	YMR316C-A	I2HB70	103 aa		5.81	□□□□□ -1.48
SKP1	YDR328C	CCW14	O13547	238 aa		5.81	□□□□□ -1.48
SKP1	YDR328C	RPL14A	P36105	138 aa	Known RBP	5.81	□□□□□ -1.48
SKP1	YDR328C	RPL14B	P38754	138 aa	Known RBP	5.81	□□□□□ -1.48
SKP1	YDR328C	HAM1	P47119	197 aa	Known RBP	5.81	□□□□□ -1.48
SKP1	YDR328C	PAU4	P53427	120 aa		5.81	□□□□□ -1.48
SKP1	YDR328C	SHH3	Q04487	196 aa		5.81	□□□□□ -1.48
SKP1	YDR328C	PBP4	Q07362	185 aa	Known RBP	5.81	□□□□□ -1.48
SKP1	YDR328C	PAA1	Q12447	191 aa	Known RBP	5.81	□□□□□ -1.48
SKP1	YDR328C	FEN2	P25621	512 aa	Known RBP	5.8	□□□□□ -1.48
SKP1	YDR328C	INO2	P26798	304 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	ACP1	P32463	125 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	ALK2	P32789	676 aa	Predicted RBP	5.8	□□□□□ -1.48
SKP1	YDR328C	MRPL38	P35996	138 aa	Predicted RBP	5.8	□□□□□ -1.48
SKP1	YDR328C	PRS4	P38063	326 aa	Predicted RBP	5.8	□□□□□ -1.48
SKP1	YDR328C	DER1	P38307	211 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	DOG2	P38773	246 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	DOG1	P38774	246 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	SAS2	P40963	338 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	LST7	P53237	242 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	YML122C	Q03207	126 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	YOR352W	Q08816	343 aa		5.8	□□□□□ -1.48
SKP1	YDR328C	TDH1	P00360	332 aa	Known RBP	5.79	□□□□□ -1.48
SKP1	YDR328C	CNB1	P25296	175 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	YPS1	P32329	569 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	RIB5	P38145	238 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	AVT5	P38176	459 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	CDS1	P38221	457 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	TAX4	P47030	604 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	YMR253C	Q04835	414 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	RXT3	Q07458	294 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	IRC23	Q08416	157 aa		5.79	□□□□□ -1.48
SKP1	YDR328C	PAU1	P0CE88	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU14	P0CE89	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU6	P0CE90	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU18	P0CE91	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU8	P0CE92	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU11	P0CE93	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU13	P38725	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PTC7	P38797	343 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	TIF11	P38912	153 aa	Known RBP	5.78	□□□□□ -1.48
SKP1	YDR328C	LOC1	P43586	204 aa	Predicted RBP	5.78	□□□□□ -1.48
SKP1	YDR328C	YGR219W	P53307	113 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU10	Q03050	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	ATC1	Q04005	294 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	SPG4	Q04438	115 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PAU20	Q08322	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	ERV2	Q12284	196 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	SME1	Q12330	94 aa	Predicted RBP	5.78	□□□□□ -1.48
SKP1	YDR328C	PAU9	Q3E770	120 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	PCC1	Q3E833	88 aa		5.78	□□□□□ -1.48
SKP1	YDR328C	TY1A-DR4	O74302	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	CDC7	P06243	507 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-A	P0CX57	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-PR1	P0CX58	440 aa		5.77	□□□□□ -1.49
SKP1	YDR328C	TY1A-OR	P0CX59	440 aa		5.77	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms