RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C GAS3Q03655 524 aa2.65□□□□□ -1.99
PBA1YLR199C GPI17Q04080 534 aa2.65□□□□□ -1.99
PBA1YLR199C HPT1Q04178 221 aaKnown RBP2.65□□□□□ -1.99
PBA1YLR199C LPP1Q04396 274 aa2.65□□□□□ -1.99
PBA1YLR199C YMR230W-AQ3E7B5 62 aa2.65□□□□□ -1.99
PBA1YLR199C YOL085CQ99345 113 aa2.65□□□□□ -1.99
PBA1YLR199C IRA1P18963 3092 aa2.65□□□□□ -1.99
PBA1YLR199C YPR170W-BP0C5R9 85 aa2.64□□□□□ -1.99
PBA1YLR199C IDP1P21954 428 aaKnown RBP2.64□□□□□ -1.99
PBA1YLR199C ATG22P25568 528 aa2.64□□□□□ -1.99
PBA1YLR199C YKL102CP34249 101 aa2.64□□□□□ -1.99
PBA1YLR199C TRM7P38238 310 aaKnown RBP2.64□□□□□ -1.99
PBA1YLR199C AST2P39945 430 aaKnown RBP2.64□□□□□ -1.99
PBA1YLR199C ARO8P53090 500 aaKnown RBP2.64□□□□□ -1.99
PBA1YLR199C YDR476CQ03362 224 aa2.64□□□□□ -1.99
PBA1YLR199C ECM11Q04110 302 aa2.64□□□□□ -1.99
PBA1YLR199C DGA1Q08650 418 aa2.64□□□□□ -1.99
PBA1YLR199C YPL162CQ12042 273 aa2.64□□□□□ -1.99
PBA1YLR199C ISD11Q6Q560 94 aa2.64□□□□□ -1.99
PBA1YLR199C FMP27Q06179 2628 aa2.64□□□□□ -1.99
PBA1YLR199C RPL40AP0CH08 128 aaKnown RBP2.63□□□□□ -1.99
PBA1YLR199C RPL40BP0CH09 128 aaKnown RBP2.63□□□□□ -1.99
PBA1YLR199C RNP1P32385 249 aa2.63□□□□□ -1.99
PBA1YLR199C UTP30P36144 274 aaKnown RBP2.63□□□□□ -1.99
PBA1YLR199C TVP38P36164 337 aa2.63□□□□□ -1.99
PBA1YLR199C YBR063CP38083 404 aa2.63□□□□□ -1.99
PBA1YLR199C YGP1P38616 354 aaKnown RBP2.63□□□□□ -1.99
PBA1YLR199C BDH1P39714 382 aa2.63□□□□□ -1.99
PBA1YLR199C UFE1P41834 346 aa2.63□□□□□ -1.99
PBA1YLR199C ARP3P47117 449 aaKnown RBP2.63□□□□□ -1.99
PBA1YLR199C IMP4P53941 290 aaKnown RBP2.63□□□□□ -1.99
PBA1YLR199C MRPS16Q02608 121 aa2.63□□□□□ -1.99
PBA1YLR199C SWP1Q02795 286 aa2.63□□□□□ -1.99
PBA1YLR199C BBP1Q12365 385 aa2.63□□□□□ -1.99
PBA1YLR199C YFR032C-BQ8TGU2 87 aa2.63□□□□□ -1.99
PBA1YLR199C NUP192P47054 1683 aa2.63□□□□□ -1.99
PBA1YLR199C FAS2P19097 1887 aaKnown RBP2.62□□□□□ -1.99
PBA1YLR199C PET9P18239 318 aaKnown RBP2.62□□□□□ -1.99
PBA1YLR199C SEC17P32602 292 aa2.62□□□□□ -1.99
PBA1YLR199C RCN1P36054 211 aa2.62□□□□□ -1.99
PBA1YLR199C POP4P38336 279 aa2.62□□□□□ -1.99
PBA1YLR199C YAR068WP39564 161 aa2.62□□□□□ -1.99
PBA1YLR199C YPI1P43587 155 aa2.62□□□□□ -1.99
PBA1YLR199C YJR111CP47148 283 aaKnown RBP2.62□□□□□ -1.99
PBA1YLR199C PGA1P53896 198 aa2.62□□□□□ -1.99
PBA1YLR199C TMA20P89886 181 aaPredicted RBP2.62□□□□□ -1.99
PBA1YLR199C PKR1Q03880 122 aaKnown RBP2.62□□□□□ -1.99
PBA1YLR199C YPR202WQ08993 238 aa2.62□□□□□ -1.99
PBA1YLR199C PRR2Q12310 699 aa2.62□□□□□ -1.99
PBA1YLR199C GEP5Q12393 293 aa2.62□□□□□ -1.99
PBA1YLR199C MPD1Q12404 318 aaKnown RBP2.62□□□□□ -1.99
PBA1YLR199C UTP20P35194 2493 aaKnown RBP2.62□□□□□ -1.99
PBA1YLR199C SEN1Q00416 2231 aaKnown RBP2.61□□□□□ -1.99
PBA1YLR199C TOM40P23644 387 aaKnown RBP2.61□□□□□ -1.99
PBA1YLR199C LDB16P25587 256 aa2.61□□□□□ -1.99
PBA1YLR199C FMP23P38231 175 aa2.61□□□□□ -1.99
PBA1YLR199C IPI1P38803 334 aaPredicted RBP2.61□□□□□ -1.99
PBA1YLR199C FIS1P40515 155 aa2.61□□□□□ -1.99
PBA1YLR199C YGR201CP42936 225 aa2.61□□□□□ -1.99
PBA1YLR199C RSM27P53305 110 aa2.61□□□□□ -1.99
PBA1YLR199C YDR249CQ03787 373 aa2.61□□□□□ -1.99
PBA1YLR199C YLR046CQ12253 270 aa2.61□□□□□ -1.99
PBA1YLR199C YPR014CQ6B0W2 109 aa2.61□□□□□ -1.99
PBA1YLR199C CKS1P20486 150 aaKnown RBP2.6□□□□□ -1.99
PBA1YLR199C SKG1P36169 355 aa2.6□□□□□ -1.99
PBA1YLR199C COS8P38723 381 aa2.6□□□□□ -1.99
PBA1YLR199C YGL101WP53144 215 aa2.6□□□□□ -1.99
PBA1YLR199C SMD1Q02260 146 aaPredicted RBP2.6□□□□□ -1.99
PBA1YLR199C MCH1Q07376 486 aa2.6□□□□□ -1.99
PBA1YLR199C IES4Q08561 116 aa2.6□□□□□ -1.99
PBA1YLR199C PDR18P53756 1333 aa2.6□□□□□ -1.99
PBA1YLR199C YRF1-3P0CX14 1859 aa2.6□□□□□ -1.99
PBA1YLR199C YRF1-7P0CX15 1859 aa2.6□□□□□ -1.99
PBA1YLR199C YRF1-6P53819 1859 aa2.6□□□□□ -1.99
PBA1YLR199C AUS1Q08409 1394 aa2.6□□□□□ -1.99
PBA1YLR199C IRA2P19158 3079 aa2.6□□□□□ -1.99
PBA1YLR199C ADH3P07246 375 aaKnown RBP2.59□□□□□ -1.99
PBA1YLR199C SGA1P08019 549 aa2.59□□□□□ -1.99
PBA1YLR199C YLR156WP0CE96 114 aa2.59□□□□□ -1.99
PBA1YLR199C YLR159WP0CE97 114 aa2.59□□□□□ -1.99
PBA1YLR199C YLR161WP0CE98 114 aa2.59□□□□□ -1.99
PBA1YLR199C UBI4P0CG63 381 aaKnown RBP2.59□□□□□ -1.99
PBA1YLR199C PBI2P0CT04 75 aaKnown RBP2.59□□□□□ -1.99
PBA1YLR199C RPB3P16370 318 aaKnown RBP2.59□□□□□ -1.99
PBA1YLR199C SEN2P16658 377 aa2.59□□□□□ -1.99
PBA1YLR199C SPO13P23624 291 aa2.59□□□□□ -1.99
PBA1YLR199C PEX34P25584 144 aa2.59□□□□□ -1.99
PBA1YLR199C PFS2P42841 465 aaKnown RBP2.59□□□□□ -1.99
PBA1YLR199C SKI6P46948 246 aaPredicted RBP2.59□□□□□ -1.99
PBA1YLR199C SOL1P50278 321 aa2.59□□□□□ -1.99
PBA1YLR199C RSM10Q03201 203 aa2.59□□□□□ -1.99
PBA1YLR199C RAV2Q03956 351 aa2.59□□□□□ -1.99
PBA1YLR199C TRM12Q04235 462 aa2.59□□□□□ -1.99
PBA1YLR199C MRX8Q05473 314 aa2.59□□□□□ -1.99
PBA1YLR199C ATG39Q06159 398 aa2.59□□□□□ -1.99
PBA1YLR199C MCP1Q12106 302 aa2.59□□□□□ -1.99
PBA1YLR199C TSC3Q3E790 80 aa2.59□□□□□ -1.99
PBA1YLR199C ADH1P00330 348 aaKnown RBP2.58□□□□□ -2
PBA1YLR199C CBP6P07253 162 aaPredicted RBP2.58□□□□□ -2
PBA1YLR199C RPL2AP0CX45 254 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms