RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C ERJ5P43613 295 aaPredicted RBP2.49□□□□□ -2.01
ATG27YJL178C SNX4P47057 423 aa2.49□□□□□ -2.01
ATG27YJL178C ADO1P47143 340 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C ALG9P53868 555 aaKnown RBP2.49□□□□□ -2.01
ATG27YJL178C AAH1P53909 347 aa2.49□□□□□ -2.01
ATG27YJL178C RNH201P53942 307 aa2.49□□□□□ -2.01
ATG27YJL178C CTF19Q02732 369 aa2.49□□□□□ -2.01
ATG27YJL178C PRM15Q03262 622 aa2.49□□□□□ -2.01
ATG27YJL178C MIX14Q04341 121 aa2.49□□□□□ -2.01
ATG27YJL178C NNT1Q05874 261 aa2.49□□□□□ -2.01
ATG27YJL178C SYM1Q06563 197 aa2.49□□□□□ -2.01
ATG27YJL178C CAM1P29547 415 aaKnown RBP2.48□□□□□ -2.01
ATG27YJL178C YBL010CP32788 280 aa2.48□□□□□ -2.01
ATG27YJL178C YKL063CP35725 167 aa2.48□□□□□ -2.01
ATG27YJL178C POP8P38208 133 aa2.48□□□□□ -2.01
ATG27YJL178C SMB1P40018 196 aaKnown RBP2.48□□□□□ -2.01
ATG27YJL178C YGL159WP53110 370 aa2.48□□□□□ -2.01
ATG27YJL178C ERV25P54837 211 aaKnown RBP2.48□□□□□ -2.01
ATG27YJL178C RPL21AQ02753 160 aaKnown RBP2.48□□□□□ -2.01
ATG27YJL178C EST3Q03096 181 aa2.48□□□□□ -2.01
ATG27YJL178C SDC1Q03323 175 aa2.48□□□□□ -2.01
ATG27YJL178C CGI121Q03705 181 aaKnown RBP2.48□□□□□ -2.01
ATG27YJL178C YDR249CQ03787 373 aa2.48□□□□□ -2.01
ATG27YJL178C REX3Q12090 404 aa2.48□□□□□ -2.01
ATG27YJL178C TFC7Q12415 435 aa2.48□□□□□ -2.01
ATG27YJL178C RPL21BQ12672 160 aaKnown RBP2.48□□□□□ -2.01
ATG27YJL178C IPP1P00817 287 aaKnown RBP2.47□□□□□ -2.01
ATG27YJL178C REP2P03872 296 aa2.47□□□□□ -2.01
ATG27YJL178C YHR214C-DP0CX93 97 aa2.47□□□□□ -2.01
ATG27YJL178C FUS3P16892 353 aaKnown RBP2.47□□□□□ -2.01
ATG27YJL178C MAG1P22134 296 aaKnown RBP2.47□□□□□ -2.01
ATG27YJL178C ATG15P25641 520 aa2.47□□□□□ -2.01
ATG27YJL178C SMP1P38128 452 aa2.47□□□□□ -2.01
ATG27YJL178C PEX22P39718 180 aa2.47□□□□□ -2.01
ATG27YJL178C RFC2P40348 353 aa2.47□□□□□ -2.01
ATG27YJL178C ECO1P43605 281 aa2.47□□□□□ -2.01
ATG27YJL178C LOH1P47055 219 aa2.47□□□□□ -2.01
ATG27YJL178C NIF3P53081 288 aa2.47□□□□□ -2.01
ATG27YJL178C YPL039WQ03080 316 aa2.47□□□□□ -2.01
ATG27YJL178C YDR209CQ03480 137 aa2.47□□□□□ -2.01
ATG27YJL178C YML018CQ03730 393 aa2.47□□□□□ -2.01
ATG27YJL178C YDR248CQ03786 193 aa2.47□□□□□ -2.01
ATG27YJL178C PIN3Q06449 215 aa2.47□□□□□ -2.01
ATG27YJL178C ANT1Q06497 328 aa2.47□□□□□ -2.01
ATG27YJL178C RRT7Q07829 113 aa2.47□□□□□ -2.01
ATG27YJL178C NIP7Q08962 181 aaKnown RBP2.47□□□□□ -2.01
ATG27YJL178C AKR2Q12013 749 aa2.47□□□□□ -2.01
ATG27YJL178C RAX2Q12465 1220 aa2.47□□□□□ -2.01
ATG27YJL178C HUT1Q12520 339 aa2.47□□□□□ -2.01
ATG27YJL178C PET20Q99373 253 aa2.47□□□□□ -2.01
ATG27YJL178C TOR2P32600 2474 aaKnown RBP2.47□□□□□ -2.01
ATG27YJL178C YBR056W-AI2HB52 66 aa2.46□□□□□ -2.02
ATG27YJL178C MSW1P04803 379 aa2.46□□□□□ -2.02
ATG27YJL178C SAG1P20840 650 aa2.46□□□□□ -2.02
ATG27YJL178C LDS1P31379 325 aa2.46□□□□□ -2.02
ATG27YJL178C BFR1P38934 470 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02 RIP-Chip
ATG27YJL178C BMT5P40493 336 aa2.46□□□□□ -2.02
ATG27YJL178C YIR035CP40579 254 aa2.46□□□□□ -2.02
ATG27YJL178C GLR1P41921 483 aaKnown RBP2.46□□□□□ -2.02
ATG27YJL178C UBC12P52491 188 aa2.46□□□□□ -2.02
ATG27YJL178C UFD1P53044 361 aa2.46□□□□□ -2.02
ATG27YJL178C NSA1P53136 463 aaPredicted RBP2.46□□□□□ -2.02
ATG27YJL178C LST7P53237 242 aa2.46□□□□□ -2.02
ATG27YJL178C HNT1Q04344 158 aaKnown RBP2.46□□□□□ -2.02
ATG27YJL178C YOL118CQ08259 102 aa2.46□□□□□ -2.02
ATG27YJL178C GRE1Q08969 168 aa2.46□□□□□ -2.02
ATG27YJL178C FRE8Q12209 686 aa2.46□□□□□ -2.02
ATG27YJL178C CSF1Q12150 2958 aa2.45□□□□□ -2.02
ATG27YJL178C CDC36P06100 191 aaPredicted RBP2.45□□□□□ -2.02
ATG27YJL178C MIR1P23641 311 aaKnown RBP2.45□□□□□ -2.02
ATG27YJL178C CNB1P25296 175 aa2.45□□□□□ -2.02
ATG27YJL178C TRR1P29509 319 aaKnown RBP2.45□□□□□ -2.02
ATG27YJL178C MRPS5P33759 307 aa2.45□□□□□ -2.02
ATG27YJL178C SWD2P36104 329 aaPredicted RBP2.45□□□□□ -2.02
ATG27YJL178C COS8P38723 381 aa2.45□□□□□ -2.02
ATG27YJL178C GCV3P39726 170 aaPredicted RBP2.45□□□□□ -2.02
ATG27YJL178C SSO2P39926 295 aa2.45□□□□□ -2.02
ATG27YJL178C YMR144WP40214 342 aaKnown RBP2.45□□□□□ -2.02
ATG27YJL178C PHB1P40961 287 aa2.45□□□□□ -2.02
ATG27YJL178C AGX1P43567 385 aa2.45□□□□□ -2.02
ATG27YJL178C RPA34P47006 233 aaPredicted RBP2.45□□□□□ -2.02
ATG27YJL178C YJL016WP47072 561 aa2.45□□□□□ -2.02
ATG27YJL178C SNN1P48232 102 aa2.45□□□□□ -2.02
ATG27YJL178C NRK1P53915 240 aa2.45□□□□□ -2.02
ATG27YJL178C HHT1P61830 136 aa2.45□□□□□ -2.02
ATG27YJL178C MRX11Q03079 207 aa2.45□□□□□ -2.02
ATG27YJL178C YML108WQ03759 105 aa2.45□□□□□ -2.02
ATG27YJL178C CAB5Q03941 241 aa2.45□□□□□ -2.02
ATG27YJL178C THI74Q04083 370 aa2.45□□□□□ -2.02
ATG27YJL178C BER1Q06688 274 aaKnown RBP2.45□□□□□ -2.02
ATG27YJL178C PML1Q07930 204 aaPredicted RBP2.45□□□□□ -2.02
ATG27YJL178C YOR192C-CQ3E736 78 aa2.45□□□□□ -2.02
ATG27YJL178C VMA9Q3E7B6 73 aa2.45□□□□□ -2.02
ATG27YJL178C UBA3Q99344 299 aa2.45□□□□□ -2.02
ATG27YJL178C CDC28P00546 298 aaKnown RBP2.44□□□□□ -2.02
ATG27YJL178C YFR010W-AP0C5N0 62 aa2.44□□□□□ -2.02
ATG27YJL178C RPL30P14120 105 aaKnown RBP2.44□□□□□ -2.02
ATG27YJL178C OCH1P31755 480 aa2.44□□□□□ -2.02
ATG27YJL178C RPB7P34087 171 aa2.44□□□□□ -2.02
ATG27YJL178C CBT1P36038 271 aaPredicted RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms