RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeast

Gene RPB4, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB4	YJL140W	CKA1	P15790	372 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	FUS3	P16892	353 aa	Known RBP	4.23	□□□□□ -1.73
RPB4	YJL140W	OLE1	P21147	510 aa	Known RBP	4.23	□□□□□ -1.73
RPB4	YJL140W	YKL102C	P34249	101 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	PRS2	P38620	318 aa	Known RBP	4.23	□□□□□ -1.73
RPB4	YJL140W	LSM12	P38828	187 aa	Known RBP	4.23	□□□□□ -1.73
RPB4	YJL140W	GLR1	P41921	483 aa	Known RBP	4.23	□□□□□ -1.73
RPB4	YJL140W	AGX1	P43567	385 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	SOL1	P50278	321 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	YIP5	P53108	310 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	PKP2	P53170	491 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	SLX9	P53251	210 aa	Predicted RBP	4.23	□□□□□ -1.73
RPB4	YJL140W	YNL046W	P53956	172 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	YCT1	Q12235	531 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	YLR108C	Q12259	485 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	YPR108W-A	Q3E7B3	70 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	HUG1	Q6Q5K6	68 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	YLR365W	Q7LIF2	110 aa		4.23	□□□□□ -1.73
RPB4	YJL140W	YML003W	P0CF16	290 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	YCR101C	P25607	182 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	ASP1	P38986	381 aa	Predicted RBP	4.22	□□□□□ -1.73
RPB4	YJL140W	POP2	P39008	433 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	YEA6	P39953	335 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	CCS1	P40202	249 aa	Known RBP	4.22	□□□□□ -1.73
RPB4	YJL140W	YDC1	Q02896	317 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	CAC2	Q04199	468 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	RIM9	Q04734	239 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	ERP1	Q05359	219 aa	Known RBP	4.22	□□□□□ -1.73
RPB4	YJL140W	BER1	Q06688	274 aa	Known RBP	4.22	□□□□□ -1.73
RPB4	YJL140W	SWT1	Q12104	458 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	YCL048W-A	Q2V2Q2	79 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	ATG40	Q99325	256 aa		4.22	□□□□□ -1.73
RPB4	YJL140W	UBI4	P0CG63	381 aa	Known RBP	4.21	□□□□□ -1.74
RPB4	YJL140W	VMA11	P32842	164 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	CUE1	P38428	203 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	LAG1	P38703	411 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	GON7	P46984	123 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	RPA34	P47006	233 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB4	YJL140W	SNN1	P48232	102 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	CWC25	P53854	179 aa	Known RBP	4.21	□□□□□ -1.74
RPB4	YJL140W	GPI15	P53961	229 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	YPL108W	Q02872	168 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB4	YJL140W	FIT1	Q04433	528 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	YMR254C	Q04838	102 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	FCF2	Q12035	217 aa	Predicted RBP	4.21	□□□□□ -1.74
RPB4	YJL140W	FCY22	Q12119	530 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	VMA9	Q3E7B6	73 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	COA2	Q3E823	68 aa		4.21	□□□□□ -1.74
RPB4	YJL140W	RPL39	P04650	51 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	SPS4	P09937	338 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	LAC1	P28496	418 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	VMA8	P32610	256 aa	Known RBP	4.2	□□□□□ -1.74
RPB4	YJL140W	NTC20	P38302	140 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB4	YJL140W	ERV15	P38312	142 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	RMD6	P39975	231 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	PCL7	P40186	285 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	YJR012C	P47087	207 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	XPT1	P47165	209 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	MCM22	P47167	239 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	YGL262W	P53054	175 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	MSO1	P53604	210 aa	Known RBP	4.2	□□□□□ -1.74
RPB4	YJL140W	SMM1	P53720	384 aa	Known RBP	4.2	□□□□□ -1.74
RPB4	YJL140W	MEH1	Q02205	184 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	ODC1	Q03028	310 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	YDR415C	Q04033	374 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB4	YJL140W	DPB4	Q04603	196 aa	Known RBP	4.2	□□□□□ -1.74
RPB4	YJL140W	UPS1	Q05776	175 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	YOR292C	Q08743	309 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	YOR029W	Q12243	111 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	ATG5	Q12380	294 aa		4.2	□□□□□ -1.74
RPB4	YJL140W	APA2	P22108	325 aa		4.19	□□□□□ -1.74
RPB4	YJL140W	YOX1	P34161	385 aa		4.19	□□□□□ -1.74
RPB4	YJL140W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RPB4	YJL140W	YNR064C	P53750	290 aa		4.19	□□□□□ -1.74
RPB4	YJL140W	YIF1	P53845	314 aa	Known RBP	4.19	□□□□□ -1.74
RPB4	YJL140W	HSK3	P69852	69 aa		4.19	□□□□□ -1.74
RPB4	YJL140W	YPL067C	Q02754	198 aa		4.19	□□□□□ -1.74
RPB4	YJL140W	AIM45	Q12480	344 aa	Known RBP	4.19	□□□□□ -1.74
RPB4	YJL140W	ISN1	Q99312	450 aa		4.19	□□□□□ -1.74
RPB4	YJL140W	GDH1	P07262	454 aa	Known RBP	4.18	□□□□□ -1.74
RPB4	YJL140W	CBT1	P36038	271 aa	Predicted RBP	4.18	□□□□□ -1.74
RPB4	YJL140W	YKL162C	P36052	402 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	EMC5	P40540	141 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	SRB7	P47822	140 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	WSC2	P53832	503 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	FMP41	P53889	259 aa	Known RBP	4.18	□□□□□ -1.74
RPB4	YJL140W	YMR082C	Q04276	118 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	YFH1	Q07540	174 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	IRC25	Q07951	179 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	RFM1	Q12192	310 aa		4.18	□□□□□ -1.74
RPB4	YJL140W	ZRC1	P20107	442 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	CNB1	P25296	175 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	ERV1	P27882	189 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	YUH1	P35127	236 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	ICS2	P38284	255 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	CTR2	P38865	189 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	RPL13B	P40212	199 aa	Known RBP	4.17	□□□□□ -1.74
RPB4	YJL140W	PRM5	P40476	318 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	PIR5	P46999	287 aa		4.17	□□□□□ -1.74
RPB4	YJL140W	GEP7	P53171	287 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 212.5 ms