RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C YPL225WQ08971 146 aaKnown RBP2.25□□□□□ -2.05
SCL1YGL011C RIO1Q12196 484 aaKnown RBP2.25□□□□□ -2.05
SCL1YGL011C SRB8P25648 1427 aa2.25□□□□□ -2.05
SCL1YGL011C RPL2AP0CX45 254 aaKnown RBP2.24□□□□□ -2.05
SCL1YGL011C RPL2BP0CX46 254 aaKnown RBP2.24□□□□□ -2.05
SCL1YGL011C TFC1P32367 649 aa2.24□□□□□ -2.05
SCL1YGL011C YER034WP40022 185 aaKnown RBP2.24□□□□□ -2.05
SCL1YGL011C RPL13BP40212 199 aaKnown RBP2.24□□□□□ -2.05
SCL1YGL011C ARP3P47117 449 aaKnown RBP2.24□□□□□ -2.05
SCL1YGL011C RPL13AQ12690 199 aaPredicted RBP2.24□□□□□ -2.05
SCL1YGL011C ODC2Q99297 307 aa2.24□□□□□ -2.05
SCL1YGL011C IGO2Q9P305 131 aa2.24□□□□□ -2.05
SCL1YGL011C YCR090CP25654 182 aaKnown RBP2.23□□□□□ -2.05
SCL1YGL011C PAN3P36102 679 aaPredicted RBP2.23□□□□□ -2.05
SCL1YGL011C VPS51P36116 164 aa2.23□□□□□ -2.05
SCL1YGL011C VMA22P38784 181 aa2.23□□□□□ -2.05
SCL1YGL011C MTW1P39731 289 aa2.23□□□□□ -2.05
SCL1YGL011C PHB1P40961 287 aa2.23□□□□□ -2.05
SCL1YGL011C YNL184CP53876 108 aa2.23□□□□□ -2.05
SCL1YGL011C ATG38Q05789 226 aaKnown RBP2.23□□□□□ -2.05
SCL1YGL011C PEP1P32319 1579 aa2.23□□□□□ -2.05
SCL1YGL011C SIN3P22579 1536 aa2.22□□□□□ -2.05
SCL1YGL011C POR1P04840 283 aaKnown RBP2.22□□□□□ -2.05
SCL1YGL011C UBC6P33296 250 aaPredicted RBP2.22□□□□□ -2.05
SCL1YGL011C UPS2P35200 230 aa2.22□□□□□ -2.05
SCL1YGL011C SKI6P46948 246 aaPredicted RBP2.22□□□□□ -2.05
SCL1YGL011C TRM3Q07527 1436 aa2.22□□□□□ -2.05
SCL1YGL011C SPT6P23615 1451 aaKnown RBP2.21□□□□□ -2.06
SCL1YGL011C YPK9Q12697 1472 aa2.21□□□□□ -2.06
SCL1YGL011C SPO13P23624 291 aa2.21□□□□□ -2.06
SCL1YGL011C MAK5P38112 773 aaPredicted RBP2.21□□□□□ -2.06
SCL1YGL011C YEA4P40004 342 aa2.21□□□□□ -2.06
SCL1YGL011C SER2P42941 309 aa2.21□□□□□ -2.06
SCL1YGL011C ALB1P47019 175 aaPredicted RBP2.21□□□□□ -2.06
SCL1YGL011C VMA10P48836 114 aaKnown RBP2.21□□□□□ -2.06
SCL1YGL011C UBC12P52491 188 aa2.21□□□□□ -2.06
SCL1YGL011C CUE4Q04201 117 aaPredicted RBP2.21□□□□□ -2.06
SCL1YGL011C BRX1Q08235 291 aaKnown RBP2.21□□□□□ -2.06
SCL1YGL011C RAD28Q12021 506 aa2.21□□□□□ -2.06
SCL1YGL011C MYO2P19524 1574 aaKnown RBP2.2□□□□□ -2.06
SCL1YGL011C TAF2P23255 1407 aa2.2□□□□□ -2.06
SCL1YGL011C YLR419WQ06698 1435 aaKnown RBP2.2□□□□□ -2.06
SCL1YGL011C QCR8P08525 94 aa2.2□□□□□ -2.06
SCL1YGL011C GPA2P10823 449 aa2.2□□□□□ -2.06
SCL1YGL011C FPR1P20081 114 aaKnown RBP2.2□□□□□ -2.06
SCL1YGL011C ECM4P36156 370 aa2.2□□□□□ -2.06
SCL1YGL011C YBR242WP38331 238 aa2.2□□□□□ -2.06
SCL1YGL011C APS3P47064 194 aa2.2□□□□□ -2.06
SCL1YGL011C YJR111CP47148 283 aaKnown RBP2.2□□□□□ -2.06
SCL1YGL011C ARO8P53090 500 aaKnown RBP2.2□□□□□ -2.06
SCL1YGL011C NUP49Q02199 472 aa2.2□□□□□ -2.06
SCL1YGL011C DGA1Q08650 418 aa2.2□□□□□ -2.06
SCL1YGL011C YKL068W-AQ3E826 78 aa2.2□□□□□ -2.06
SCL1YGL011C FAS1P07149 2051 aaKnown RBP2.2□□□□□ -2.06
SCL1YGL011C MLP2P40457 1679 aa2.19□□□□□ -2.06
SCL1YGL011C TRM732Q03496 1420 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-LR1P0C2J3 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-FP0CX63 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-GR2P0CX64 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-CP25384 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-DR2Q03494 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY1B-DR1Q03855 1755 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-DR3Q07791 1770 aaKnown RBP2.19□□□□□ -2.06
SCL1YGL011C TY2B-OR1Q12113 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-DR1Q12472 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-BQ12491 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY2B-OR2Q12501 1770 aa2.19□□□□□ -2.06
SCL1YGL011C TY1B-DR3Q99231 1755 aa2.19□□□□□ -2.06
SCL1YGL011C SEC11P15367 167 aa2.19□□□□□ -2.06
SCL1YGL011C RME1P32338 300 aaKnown RBP2.19□□□□□ -2.06
SCL1YGL011C AIM2P39721 246 aa2.19□□□□□ -2.06
SCL1YGL011C RBL2P48606 106 aaKnown RBP2.19□□□□□ -2.06
SCL1YGL011C RPO31P04051 1460 aa2.19□□□□□ -2.06
SCL1YGL011C IRC20Q06554 1556 aa2.19□□□□□ -2.06
SCL1YGL011C TVP23P38962 199 aa2.18□□□□□ -2.06
SCL1YGL011C YER137CP40083 148 aaKnown RBP2.18□□□□□ -2.06
SCL1YGL011C PDS1P40316 373 aaPredicted RBP2.18□□□□□ -2.06
SCL1YGL011C ORM1P53224 222 aa2.18□□□□□ -2.06
SCL1YGL011C GIM3P53900 129 aa2.18□□□□□ -2.06
SCL1YGL011C YMR099CQ03161 297 aaKnown RBP2.18□□□□□ -2.06
SCL1YGL011C DML1Q03652 475 aa2.18□□□□□ -2.06
SCL1YGL011C YOL014WQ08110 124 aa2.18□□□□□ -2.06
SCL1YGL011C GCN2P15442 1659 aa2.18□□□□□ -2.06
SCL1YGL011C SNF4P12904 322 aa2.17□□□□□ -2.06
SCL1YGL011C FMP23P38231 175 aa2.17□□□□□ -2.06
SCL1YGL011C FES1P38260 290 aa2.17□□□□□ -2.06
SCL1YGL011C EDC3P39998 551 aaKnown RBP2.17□□□□□ -2.06
SCL1YGL011C DYN3Q04949 312 aa2.17□□□□□ -2.06
SCL1YGL011C NOC4Q06512 552 aaPredicted RBP2.17□□□□□ -2.06
SCL1YGL011C YOL024WQ08172 172 aa2.17□□□□□ -2.06
SCL1YGL011C CMC2Q3E7A4 109 aa2.17□□□□□ -2.06
SCL1YGL011C ESP1Q03018 1630 aa2.17□□□□□ -2.06
SCL1YGL011C HSL1P34244 1518 aa2.17□□□□□ -2.06
SCL1YGL011C TSC11P40061 1430 aa2.17□□□□□ -2.06
SCL1YGL011C TY1B-HO13535 1793 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-DR5P0C2I2 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-DR6P0C2I3 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-LR2P0C2I5 1755 aa2.16□□□□□ -2.06
SCL1YGL011C TY1B-LR3P0C2I6 1755 aaKnown RBP2.16□□□□□ -2.06
SCL1YGL011C TY1B-PR1P0C2I9 1755 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms